Schistosoma curassoni

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 22688 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A183K9Y4|A0A183K9Y4_9TREM Uncharacterized protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS11817 PE=4 SV=1
MM1 pKa = 7.28NLSLPQQFWTKK12 pKa = 10.73LFIVLNSCFVIFGIVLLALGIKK34 pKa = 10.24GLEE37 pKa = 4.1TLNKK41 pKa = 9.96FGTILTGIIPPIIPIAIFIGCLILIGTTIGYY72 pKa = 9.54IGLWKK77 pKa = 9.62PKK79 pKa = 10.16KK80 pKa = 9.69FIHH83 pKa = 6.45IACLCLAVIIEE94 pKa = 4.2IAIATATATMGEE106 pKa = 4.31KK107 pKa = 10.31FQTAANHH114 pKa = 6.08SVLQAVKK121 pKa = 10.14QFYY124 pKa = 10.54SNPYY128 pKa = 8.77CQVEE132 pKa = 4.01MDD134 pKa = 3.59KK135 pKa = 11.12LQRR138 pKa = 11.84NYY140 pKa = 9.79RR141 pKa = 11.84CCGATSYY148 pKa = 11.45LDD150 pKa = 3.52YY151 pKa = 11.22VQTNKK156 pKa = 9.09TVPFSCFIGTLVYY169 pKa = 10.5ARR171 pKa = 11.84HH172 pKa = 6.35IFDD175 pKa = 6.13DD176 pKa = 5.63DD177 pKa = 4.7DD178 pKa = 6.19ALDD181 pKa = 5.78DD182 pKa = 6.58DD183 pKa = 5.27DD184 pKa = 5.59TLDD187 pKa = 5.99DD188 pKa = 5.79DD189 pKa = 6.15ALDD192 pKa = 5.71DD193 pKa = 5.85DD194 pKa = 6.35DD195 pKa = 7.56DD196 pKa = 5.01DD197 pKa = 6.59ALDD200 pKa = 4.67EE201 pKa = 5.63DD202 pKa = 5.99DD203 pKa = 6.66DD204 pKa = 5.69DD205 pKa = 6.59ALDD208 pKa = 5.87DD209 pKa = 5.74DD210 pKa = 6.41DD211 pKa = 7.57DD212 pKa = 5.58DD213 pKa = 6.57ALDD216 pKa = 5.81DD217 pKa = 5.74DD218 pKa = 6.41DD219 pKa = 7.57DD220 pKa = 5.58DD221 pKa = 6.57ALDD224 pKa = 5.81DD225 pKa = 5.74DD226 pKa = 6.41DD227 pKa = 7.57DD228 pKa = 5.58DD229 pKa = 6.57ALDD232 pKa = 6.02DD233 pKa = 6.43DD234 pKa = 6.52DD235 pKa = 7.72DD236 pKa = 7.25DD237 pKa = 7.47DD238 pKa = 7.49DD239 pKa = 7.17DD240 pKa = 6.74GDD242 pKa = 4.16YY243 pKa = 11.47DD244 pKa = 5.31ALNDD248 pKa = 5.4DD249 pKa = 5.43DD250 pKa = 6.44ALDD253 pKa = 5.67DD254 pKa = 5.71DD255 pKa = 6.41DD256 pKa = 7.57DD257 pKa = 5.58DD258 pKa = 6.57ALDD261 pKa = 5.2DD262 pKa = 5.86DD263 pKa = 6.31DD264 pKa = 7.37DD265 pKa = 3.75ITDD268 pKa = 4.84FIRR271 pKa = 11.84KK272 pKa = 8.12FWQKK276 pKa = 10.6IFITLNTLFVIFNIILLILGIITQNTLSKK305 pKa = 10.04YY306 pKa = 5.68TTILNTPISAIIPTILFTGCFGFIAALIGYY336 pKa = 8.88IGLWKK341 pKa = 10.17PMNLIALMHH350 pKa = 6.95IISLCIVTLIEE361 pKa = 3.98IGIATTSAVMYY372 pKa = 9.7DD373 pKa = 3.19QFYY376 pKa = 7.35TTTHH380 pKa = 6.06SALLDD385 pKa = 3.71SVKK388 pKa = 10.29FYY390 pKa = 11.55YY391 pKa = 10.48EE392 pKa = 3.57NSQYY396 pKa = 10.82EE397 pKa = 4.2MEE399 pKa = 4.43MDD401 pKa = 3.59HH402 pKa = 6.69LQTEE406 pKa = 5.42FKK408 pKa = 10.84CCGAEE413 pKa = 4.02SYY415 pKa = 11.32LDD417 pKa = 3.69YY418 pKa = 11.04RR419 pKa = 11.84KK420 pKa = 10.52LGMNIPFSCIIGYY433 pKa = 9.13LVYY436 pKa = 10.88ARR438 pKa = 11.84VPLEE442 pKa = 4.04EE443 pKa = 4.59PFHH446 pKa = 6.13GVSNRR451 pKa = 11.84KK452 pKa = 9.63VITALIPLTAFKK464 pKa = 9.78ITDD467 pKa = 3.52SEE469 pKa = 4.32FFYY472 pKa = 11.35SDD474 pKa = 4.84LEE476 pKa = 5.17DD477 pKa = 4.05IMINKK482 pKa = 8.97

Molecular weight: 54.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A183JGX8|A0A183JGX8_9TREM Uncharacterized protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS1952 PE=4 SV=1
MM1 pKa = 7.33MLTTKK6 pKa = 10.19RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84IRR11 pKa = 11.84TVKK14 pKa = 9.14RR15 pKa = 11.84TNPINAFQKK24 pKa = 9.18MRR26 pKa = 11.84TIINIII32 pKa = 3.49

Molecular weight: 3.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

22688

0

22688

5552202

29

4267

244.7

27.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.506 ± 0.018

2.092 ± 0.012

5.36 ± 0.046

5.507 ± 0.021

3.799 ± 0.014

4.39 ± 0.024

2.921 ± 0.012

6.691 ± 0.02

5.769 ± 0.021

9.558 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.166 ± 0.015

7.165 ± 0.028

4.457 ± 0.017

4.326 ± 0.016

4.947 ± 0.017

9.985 ± 0.032

6.635 ± 0.038

5.359 ± 0.025

1.021 ± 0.006

3.23 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski