Streptococcus satellite phage Javan267

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 7.05

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZHN0|A0A4D5ZHN0_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan267 OX=2558598 GN=JavanS267_0013 PE=4 SV=1
MM1 pKa = 7.27NRR3 pKa = 11.84LKK5 pKa = 10.56EE6 pKa = 3.91LRR8 pKa = 11.84QEE10 pKa = 4.15KK11 pKa = 10.33KK12 pKa = 10.62LSQKK16 pKa = 10.35EE17 pKa = 3.78IAEE20 pKa = 4.22TLGFSLRR27 pKa = 11.84SFQRR31 pKa = 11.84MEE33 pKa = 3.91NGEE36 pKa = 4.05NQIKK40 pKa = 9.89PEE42 pKa = 4.02KK43 pKa = 9.71AQQLADD49 pKa = 3.69YY50 pKa = 9.64FGVSVGYY57 pKa = 10.38LLGYY61 pKa = 9.63SDD63 pKa = 4.55VRR65 pKa = 11.84FEE67 pKa = 4.9LEE69 pKa = 4.07QIEE72 pKa = 4.39KK73 pKa = 10.37AIKK76 pKa = 9.29NRR78 pKa = 11.84LMDD81 pKa = 4.11SEE83 pKa = 4.47STINKK88 pKa = 9.68DD89 pKa = 3.4VFEE92 pKa = 4.39NTLKK96 pKa = 10.47IVEE99 pKa = 4.32LARR102 pKa = 11.84FLDD105 pKa = 4.02LDD107 pKa = 4.55LDD109 pKa = 4.81TITSLYY115 pKa = 10.34FYY117 pKa = 10.05NCEE120 pKa = 3.38ISKK123 pKa = 10.5IKK125 pKa = 9.37TLNDD129 pKa = 3.02LFDD132 pKa = 4.8FFDD135 pKa = 4.7SEE137 pKa = 4.12AHH139 pKa = 6.67GYY141 pKa = 8.53MEE143 pKa = 5.16LLSIVEE149 pKa = 4.78PYY151 pKa = 10.1QADD154 pKa = 4.08EE155 pKa = 4.71IIQEE159 pKa = 3.99ISKK162 pKa = 10.87LGDD165 pKa = 3.44YY166 pKa = 10.73KK167 pKa = 11.3EE168 pKa = 4.12EE169 pKa = 4.04LSLYY173 pKa = 9.09LDD175 pKa = 3.43KK176 pKa = 11.34VRR178 pKa = 11.84AEE180 pKa = 3.71EE181 pKa = 4.9DD182 pKa = 3.6FFNVTGYY189 pKa = 9.94PITIEE194 pKa = 3.77TDD196 pKa = 3.67EE197 pKa = 4.48IPNNVVKK204 pKa = 10.66INRR207 pKa = 11.84IEE209 pKa = 3.92NTLSDD214 pKa = 4.56KK215 pKa = 11.1EE216 pKa = 4.61LMALPPQKK224 pKa = 10.26RR225 pKa = 11.84KK226 pKa = 10.0EE227 pKa = 3.93YY228 pKa = 10.4LKK230 pKa = 11.19NFFDD234 pKa = 4.25EE235 pKa = 4.74VNDD238 pKa = 4.15ALSSLTDD245 pKa = 4.32NIDD248 pKa = 3.54DD249 pKa = 4.98AIKK252 pKa = 9.57TVSQNQVDD260 pKa = 4.23LLINNLIKK268 pKa = 10.75ALAKK272 pKa = 10.95LNDD275 pKa = 4.08VKK277 pKa = 11.44NKK279 pKa = 10.22DD280 pKa = 3.2

Molecular weight: 32.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZHL8|A0A4D5ZHL8_9VIRU HTH cro/C1-type domain-containing protein OS=Streptococcus satellite phage Javan267 OX=2558598 GN=JavanS267_0003 PE=4 SV=1
MM1 pKa = 7.43EE2 pKa = 5.07VIKK5 pKa = 10.82SITIEE10 pKa = 4.16TFIKK14 pKa = 10.24PMKK17 pKa = 9.81NKK19 pKa = 10.25NISHH23 pKa = 7.33GIAEE27 pKa = 4.31LDD29 pKa = 3.6GRR31 pKa = 11.84KK32 pKa = 9.93LEE34 pKa = 4.22IDD36 pKa = 4.08LDD38 pKa = 3.71NLYY41 pKa = 8.93ITFGSNHH48 pKa = 6.29FDD50 pKa = 3.63LARR53 pKa = 11.84IPGTKK58 pKa = 9.74GGNRR62 pKa = 11.84YY63 pKa = 9.04FFLCPICGNRR73 pKa = 11.84CRR75 pKa = 11.84KK76 pKa = 9.38LYY78 pKa = 10.47KK79 pKa = 10.21RR80 pKa = 11.84LFQYY84 pKa = 11.26GCGSCQKK91 pKa = 9.71IHH93 pKa = 7.2KK94 pKa = 8.43STLNRR99 pKa = 11.84SKK101 pKa = 9.89TDD103 pKa = 3.25CQYY106 pKa = 10.79YY107 pKa = 8.91WEE109 pKa = 4.49LALRR113 pKa = 11.84EE114 pKa = 4.13ARR116 pKa = 11.84KK117 pKa = 9.93VEE119 pKa = 4.41PGWSPKK125 pKa = 9.98RR126 pKa = 11.84GGYY129 pKa = 8.86MFDD132 pKa = 4.06SFPEE136 pKa = 3.89RR137 pKa = 11.84PKK139 pKa = 9.48YY140 pKa = 9.67MKK142 pKa = 9.96RR143 pKa = 11.84KK144 pKa = 9.49RR145 pKa = 11.84YY146 pKa = 8.21YY147 pKa = 9.09KK148 pKa = 10.15HH149 pKa = 4.77YY150 pKa = 10.44QKK152 pKa = 10.67FVNYY156 pKa = 7.57TRR158 pKa = 11.84KK159 pKa = 10.24GDD161 pKa = 4.06SFWLNGLSSLRR172 pKa = 3.78

Molecular weight: 20.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14

0

14

2669

57

491

190.6

22.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.695 ± 0.464

0.787 ± 0.226

5.283 ± 0.46

8.28 ± 0.833

4.496 ± 0.336

4.833 ± 0.479

1.798 ± 0.296

7.119 ± 0.478

9.067 ± 0.372

10.229 ± 0.64

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.323 ± 0.348

5.283 ± 0.507

3.597 ± 0.543

3.672 ± 0.247

5.283 ± 0.489

5.807 ± 0.431

5.92 ± 0.34

5.133 ± 0.609

0.787 ± 0.186

4.608 ± 0.416
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski