Capybara microvirus Cap1_SP_83

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7M1|A0A4P8W7M1_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_83 OX=2584794 PE=4 SV=1
MM1 pKa = 7.57SLLDD5 pKa = 4.44NIKK8 pKa = 9.66TSAKK12 pKa = 9.64EE13 pKa = 3.75DD14 pKa = 3.69SLLVSQSNSALLDD27 pKa = 3.74SLAHH31 pKa = 5.95QFDD34 pKa = 3.95GTDD37 pKa = 3.6FEE39 pKa = 6.36SRR41 pKa = 11.84AQSNPYY47 pKa = 8.2LTSSYY52 pKa = 10.96GSKK55 pKa = 9.06TLWDD59 pKa = 4.55KK60 pKa = 11.28IGDD63 pKa = 4.05LIGFRR68 pKa = 11.84TSEE71 pKa = 4.12DD72 pKa = 3.47VYY74 pKa = 10.64EE75 pKa = 4.19TDD77 pKa = 5.0RR78 pKa = 11.84IQAAKK83 pKa = 10.28DD84 pKa = 3.37YY85 pKa = 10.6NAQLQQLYY93 pKa = 10.76DD94 pKa = 3.69EE95 pKa = 4.6QAYY98 pKa = 10.57NSPSAQASRR107 pKa = 11.84YY108 pKa = 9.11RR109 pKa = 11.84EE110 pKa = 3.79AGINPDD116 pKa = 2.99INGSVSSGEE125 pKa = 3.68ASEE128 pKa = 5.24FSQEE132 pKa = 3.77QTSPVSPPASYY143 pKa = 11.49NFGQFSKK150 pKa = 10.98VCFDD154 pKa = 5.46AIQVALNLADD164 pKa = 3.98GFTSLRR170 pKa = 11.84GKK172 pKa = 10.7FIDD175 pKa = 3.53QAGAEE180 pKa = 4.19LSQYY184 pKa = 10.88SAVDD188 pKa = 3.61SVALLDD194 pKa = 4.66FLSQEE199 pKa = 4.38QISDD203 pKa = 3.75SDD205 pKa = 3.62FDD207 pKa = 5.45DD208 pKa = 4.56YY209 pKa = 11.87PNMIAPAVKK218 pKa = 10.3VEE220 pKa = 3.99KK221 pKa = 11.0GPDD224 pKa = 3.13KK225 pKa = 10.79FSSKK229 pKa = 10.04RR230 pKa = 11.84LQSAYY235 pKa = 10.25DD236 pKa = 3.37RR237 pKa = 11.84KK238 pKa = 10.39LSQLIRR244 pKa = 11.84SGSLRR249 pKa = 11.84GQGIRR254 pKa = 11.84MQGLNQYY261 pKa = 10.08YY262 pKa = 10.32GDD264 pKa = 3.85RR265 pKa = 11.84LSMFEE270 pKa = 4.23SKK272 pKa = 10.32NAYY275 pKa = 9.73GLDD278 pKa = 3.86GLDD281 pKa = 3.47SSLDD285 pKa = 3.24IITRR289 pKa = 11.84HH290 pKa = 5.93LGSLRR295 pKa = 11.84KK296 pKa = 8.67ATEE299 pKa = 3.66EE300 pKa = 3.97ATLKK304 pKa = 11.0ASAAQGKK311 pKa = 9.48FDD313 pKa = 3.58EE314 pKa = 6.0AYY316 pKa = 8.87TQGLDD321 pKa = 3.36PSQVSEE327 pKa = 4.78SDD329 pKa = 3.14MASYY333 pKa = 10.64KK334 pKa = 10.62SSEE337 pKa = 3.96QEE339 pKa = 3.95KK340 pKa = 10.45EE341 pKa = 3.54ISEE344 pKa = 4.28ALNKK348 pKa = 8.46TVNGIVSDD356 pKa = 3.75LRR358 pKa = 11.84KK359 pKa = 10.6NIDD362 pKa = 4.58DD363 pKa = 4.32DD364 pKa = 4.13PKK366 pKa = 10.42HH367 pKa = 6.55AFFSRR372 pKa = 11.84LLLIGFYY379 pKa = 10.86LLSNNLMPSLSFGRR393 pKa = 11.84SSSQGAYY400 pKa = 7.92TGKK403 pKa = 10.17FGSSARR409 pKa = 11.84SSSGFNFGIKK419 pKa = 9.79

Molecular weight: 45.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7L4|A0A4P8W7L4_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_83 OX=2584794 PE=4 SV=1
MM1 pKa = 7.65CSSPITIRR9 pKa = 11.84NPNYY13 pKa = 10.3AFSRR17 pKa = 11.84DD18 pKa = 3.21STGNIKK24 pKa = 10.09PLIFHH29 pKa = 7.51DD30 pKa = 4.01SNIRR34 pKa = 11.84HH35 pKa = 5.74VADD38 pKa = 3.68SSPYY42 pKa = 7.76MQVPCGHH49 pKa = 6.75CPDD52 pKa = 3.7CVARR56 pKa = 11.84KK57 pKa = 10.05SSDD60 pKa = 3.01LAQRR64 pKa = 11.84ASIEE68 pKa = 4.13SLYY71 pKa = 11.1SHH73 pKa = 6.73VFFLTLTYY81 pKa = 11.28NNDD84 pKa = 3.65SLPHH88 pKa = 6.24FLTSEE93 pKa = 4.03GGNIPFADD101 pKa = 4.42FSDD104 pKa = 3.78LQKK107 pKa = 10.21MFKK110 pKa = 10.53LIRR113 pKa = 11.84KK114 pKa = 8.33YY115 pKa = 11.14NEE117 pKa = 3.21ILRR120 pKa = 11.84PFKK123 pKa = 10.51YY124 pKa = 10.33VSVSEE129 pKa = 4.44RR130 pKa = 11.84GTEE133 pKa = 4.0GARR136 pKa = 11.84PHH138 pKa = 5.73FHH140 pKa = 6.29VLLFVEE146 pKa = 5.23KK147 pKa = 10.63LPKK150 pKa = 9.97DD151 pKa = 4.02DD152 pKa = 5.36YY153 pKa = 12.05NDD155 pKa = 3.49ILNLEE160 pKa = 4.77SYY162 pKa = 10.62LSSLFLRR169 pKa = 11.84RR170 pKa = 11.84WQRR173 pKa = 11.84NYY175 pKa = 10.93GSTRR179 pKa = 11.84NPDD182 pKa = 3.31YY183 pKa = 11.28RR184 pKa = 11.84NLCTFVDD191 pKa = 3.58KK192 pKa = 10.75STLFRR197 pKa = 11.84KK198 pKa = 7.64QTNFDD203 pKa = 3.33LHH205 pKa = 5.76YY206 pKa = 10.86VKK208 pKa = 10.54PDD210 pKa = 3.32VNNGISSVVYY220 pKa = 9.58YY221 pKa = 10.42CMKK224 pKa = 10.85YY225 pKa = 8.33MLKK228 pKa = 10.37EE229 pKa = 3.99SSHH232 pKa = 6.7DD233 pKa = 3.99SKK235 pKa = 11.43LHH237 pKa = 5.26YY238 pKa = 10.03ALKK241 pKa = 10.67SSLPPGEE248 pKa = 4.94AAQSWSVVRR257 pKa = 11.84SKK259 pKa = 10.62RR260 pKa = 11.84ACSLDD265 pKa = 3.39FGRR268 pKa = 11.84KK269 pKa = 8.89SDD271 pKa = 3.65PSVLKK276 pKa = 10.51RR277 pKa = 11.84IHH279 pKa = 7.54DD280 pKa = 4.31DD281 pKa = 3.25VDD283 pKa = 3.04KK284 pKa = 11.21CRR286 pKa = 11.84YY287 pKa = 9.46LYY289 pKa = 7.42NTPVFCYY296 pKa = 9.59PDD298 pKa = 3.79CALTAPLSRR307 pKa = 11.84YY308 pKa = 10.11YY309 pKa = 11.07YY310 pKa = 10.46DD311 pKa = 5.26ALSLDD316 pKa = 3.32QVQYY320 pKa = 11.7YY321 pKa = 10.42NDD323 pKa = 4.97LYY325 pKa = 11.27QSLPPSSSLDD335 pKa = 3.38YY336 pKa = 10.89DD337 pKa = 3.61SRR339 pKa = 11.84LLKK342 pKa = 10.92DD343 pKa = 2.9SDD345 pKa = 3.17KK346 pKa = 10.71FRR348 pKa = 11.84RR349 pKa = 11.84LKK351 pKa = 10.16TDD353 pKa = 3.13VFSEE357 pKa = 4.06NVNIYY362 pKa = 10.89EE363 pKa = 4.68NILL366 pKa = 3.49

Molecular weight: 42.45 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1745

73

654

290.8

32.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.986 ± 1.052

1.605 ± 0.463

7.679 ± 0.365

3.381 ± 0.469

6.991 ± 0.909

4.814 ± 0.854

2.006 ± 0.416

4.928 ± 0.571

4.527 ± 0.677

10.372 ± 1.317

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.777 ± 0.214

5.272 ± 0.601

4.069 ± 0.572

3.61 ± 0.969

5.1 ± 0.429

13.123 ± 0.749

3.725 ± 0.409

5.903 ± 0.889

0.573 ± 0.151

5.559 ± 0.773
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski