Amino acid dipepetide frequency for Hubei tick virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.624AlaAla: 2.624 ± 0.0
0.656AlaCys: 0.656 ± 0.0
2.624AlaAsp: 2.624 ± 0.0
3.28AlaGlu: 3.28 ± 0.0
3.608AlaPhe: 3.608 ± 0.0
2.296AlaGly: 2.296 ± 0.0
0.656AlaHis: 0.656 ± 0.0
4.592AlaIle: 4.592 ± 0.0
2.296AlaLys: 2.296 ± 0.0
5.576AlaLeu: 5.576 ± 0.0
1.968AlaMet: 1.968 ± 0.0
1.312AlaAsn: 1.312 ± 0.0
2.952AlaPro: 2.952 ± 0.0
2.624AlaGln: 2.624 ± 0.0
4.92AlaArg: 4.92 ± 0.0
4.92AlaSer: 4.92 ± 0.0
2.624AlaThr: 2.624 ± 0.0
4.592AlaVal: 4.592 ± 0.0
0.656AlaTrp: 0.656 ± 0.0
3.28AlaTyr: 3.28 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.328CysAla: 0.328 ± 0.0
0.656CysCys: 0.656 ± 0.0
0.984CysAsp: 0.984 ± 0.0
0.984CysGlu: 0.984 ± 0.0
0.984CysPhe: 0.984 ± 0.0
1.312CysGly: 1.312 ± 0.0
0.328CysHis: 0.328 ± 0.0
0.328CysIle: 0.328 ± 0.0
0.984CysLys: 0.984 ± 0.0
1.312CysLeu: 1.312 ± 0.0
0.328CysMet: 0.328 ± 0.0
0.984CysAsn: 0.984 ± 0.0
1.64CysPro: 1.64 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.656CysArg: 0.656 ± 0.0
0.984CysSer: 0.984 ± 0.0
1.64CysThr: 1.64 ± 0.0
0.656CysVal: 0.656 ± 0.0
0.328CysTrp: 0.328 ± 0.0
0.328CysTyr: 0.328 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.936AspAla: 3.936 ± 0.0
0.656AspCys: 0.656 ± 0.0
3.608AspAsp: 3.608 ± 0.0
2.952AspGlu: 2.952 ± 0.0
2.952AspPhe: 2.952 ± 0.0
2.952AspGly: 2.952 ± 0.0
0.656AspHis: 0.656 ± 0.0
2.624AspIle: 2.624 ± 0.0
3.936AspLys: 3.936 ± 0.0
5.904AspLeu: 5.904 ± 0.0
1.968AspMet: 1.968 ± 0.0
1.968AspAsn: 1.968 ± 0.0
3.28AspPro: 3.28 ± 0.0
2.952AspGln: 2.952 ± 0.0
2.296AspArg: 2.296 ± 0.0
5.248AspSer: 5.248 ± 0.0
2.296AspThr: 2.296 ± 0.0
1.64AspVal: 1.64 ± 0.0
0.984AspTrp: 0.984 ± 0.0
1.312AspTyr: 1.312 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
1.968GluAla: 1.968 ± 0.0
0.656GluCys: 0.656 ± 0.0
3.28GluAsp: 3.28 ± 0.0
6.232GluGlu: 6.232 ± 0.0
5.904GluPhe: 5.904 ± 0.0
2.624GluGly: 2.624 ± 0.0
1.312GluHis: 1.312 ± 0.0
4.592GluIle: 4.592 ± 0.0
2.952GluLys: 2.952 ± 0.0
6.232GluLeu: 6.232 ± 0.0
1.64GluMet: 1.64 ± 0.0
0.984GluAsn: 0.984 ± 0.0
2.624GluPro: 2.624 ± 0.0
2.296GluGln: 2.296 ± 0.0
4.264GluArg: 4.264 ± 0.0
2.952GluSer: 2.952 ± 0.0
2.296GluThr: 2.296 ± 0.0
3.608GluVal: 3.608 ± 0.0
1.64GluTrp: 1.64 ± 0.0
0.656GluTyr: 0.656 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.608PheAla: 3.608 ± 0.0
0.656PheCys: 0.656 ± 0.0
5.248PheAsp: 5.248 ± 0.0
4.264PheGlu: 4.264 ± 0.0
4.264PhePhe: 4.264 ± 0.0
3.28PheGly: 3.28 ± 0.0
0.656PheHis: 0.656 ± 0.0
2.624PheIle: 2.624 ± 0.0
6.888PheLys: 6.888 ± 0.0
1.64PheLeu: 1.64 ± 0.0
0.984PheMet: 0.984 ± 0.0
3.608PheAsn: 3.608 ± 0.0
0.984PhePro: 0.984 ± 0.0
2.952PheGln: 2.952 ± 0.0
3.608PheArg: 3.608 ± 0.0
4.92PheSer: 4.92 ± 0.0
2.624PheThr: 2.624 ± 0.0
4.592PheVal: 4.592 ± 0.0
0.656PheTrp: 0.656 ± 0.0
2.952PheTyr: 2.952 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.968GlyAla: 1.968 ± 0.0
0.328GlyCys: 0.328 ± 0.0
3.608GlyAsp: 3.608 ± 0.0
1.64GlyGlu: 1.64 ± 0.0
2.952GlyPhe: 2.952 ± 0.0
3.608GlyGly: 3.608 ± 0.0
0.328GlyHis: 0.328 ± 0.0
5.904GlyIle: 5.904 ± 0.0
2.952GlyLys: 2.952 ± 0.0
5.248GlyLeu: 5.248 ± 0.0
1.312GlyMet: 1.312 ± 0.0
2.624GlyAsn: 2.624 ± 0.0
2.952GlyPro: 2.952 ± 0.0
2.952GlyGln: 2.952 ± 0.0
3.28GlyArg: 3.28 ± 0.0
5.248GlySer: 5.248 ± 0.0
1.968GlyThr: 1.968 ± 0.0
4.264GlyVal: 4.264 ± 0.0
0.984GlyTrp: 0.984 ± 0.0
2.624GlyTyr: 2.624 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.328HisAla: 0.328 ± 0.0
0.328HisCys: 0.328 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.64HisGlu: 1.64 ± 0.0
2.296HisPhe: 2.296 ± 0.0
0.984HisGly: 0.984 ± 0.0
0.984HisHis: 0.984 ± 0.0
1.64HisIle: 1.64 ± 0.0
0.656HisLys: 0.656 ± 0.0
1.312HisLeu: 1.312 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.312HisAsn: 1.312 ± 0.0
1.64HisPro: 1.64 ± 0.0
3.608HisGln: 3.608 ± 0.0
0.984HisArg: 0.984 ± 0.0
0.656HisSer: 0.656 ± 0.0
0.328HisThr: 0.328 ± 0.0
1.312HisVal: 1.312 ± 0.0
1.64HisTrp: 1.64 ± 0.0
0.328HisTyr: 0.328 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.592IleAla: 4.592 ± 0.0
1.64IleCys: 1.64 ± 0.0
3.608IleAsp: 3.608 ± 0.0
3.608IleGlu: 3.608 ± 0.0
3.28IlePhe: 3.28 ± 0.0
3.608IleGly: 3.608 ± 0.0
1.64IleHis: 1.64 ± 0.0
1.968IleIle: 1.968 ± 0.0
2.952IleLys: 2.952 ± 0.0
5.248IleLeu: 5.248 ± 0.0
0.984IleMet: 0.984 ± 0.0
2.624IleAsn: 2.624 ± 0.0
2.952IlePro: 2.952 ± 0.0
2.624IleGln: 2.624 ± 0.0
4.264IleArg: 4.264 ± 0.0
5.248IleSer: 5.248 ± 0.0
0.984IleThr: 0.984 ± 0.0
4.592IleVal: 4.592 ± 0.0
0.328IleTrp: 0.328 ± 0.0
1.312IleTyr: 1.312 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
0.984LysAla: 0.984 ± 0.0
0.984LysCys: 0.984 ± 0.0
3.936LysAsp: 3.936 ± 0.0
3.608LysGlu: 3.608 ± 0.0
3.28LysPhe: 3.28 ± 0.0
1.312LysGly: 1.312 ± 0.0
2.296LysHis: 2.296 ± 0.0
3.936LysIle: 3.936 ± 0.0
8.855LysLys: 8.855 ± 0.0
6.888LysLeu: 6.888 ± 0.0
1.312LysMet: 1.312 ± 0.0
3.28LysAsn: 3.28 ± 0.0
0.656LysPro: 0.656 ± 0.0
2.624LysGln: 2.624 ± 0.0
1.64LysArg: 1.64 ± 0.0
5.904LysSer: 5.904 ± 0.0
3.608LysThr: 3.608 ± 0.0
5.904LysVal: 5.904 ± 0.0
1.64LysTrp: 1.64 ± 0.0
2.952LysTyr: 2.952 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.592LeuAla: 4.592 ± 0.0
1.312LeuCys: 1.312 ± 0.0
3.936LeuAsp: 3.936 ± 0.0
7.543LeuGlu: 7.543 ± 0.0
3.28LeuPhe: 3.28 ± 0.0
4.264LeuGly: 4.264 ± 0.0
1.64LeuHis: 1.64 ± 0.0
3.28LeuIle: 3.28 ± 0.0
5.248LeuLys: 5.248 ± 0.0
7.871LeuLeu: 7.871 ± 0.0
2.296LeuMet: 2.296 ± 0.0
6.56LeuAsn: 6.56 ± 0.0
6.56LeuPro: 6.56 ± 0.0
4.592LeuGln: 4.592 ± 0.0
5.576LeuArg: 5.576 ± 0.0
5.576LeuSer: 5.576 ± 0.0
3.936LeuThr: 3.936 ± 0.0
6.56LeuVal: 6.56 ± 0.0
0.328LeuTrp: 0.328 ± 0.0
1.968LeuTyr: 1.968 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.64MetAla: 1.64 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.968MetAsp: 1.968 ± 0.0
0.984MetGlu: 0.984 ± 0.0
0.984MetPhe: 0.984 ± 0.0
0.328MetGly: 0.328 ± 0.0
0.656MetHis: 0.656 ± 0.0
0.328MetIle: 0.328 ± 0.0
1.64MetLys: 1.64 ± 0.0
3.608MetLeu: 3.608 ± 0.0
1.312MetMet: 1.312 ± 0.0
2.296MetAsn: 2.296 ± 0.0
0.0MetPro: 0.0 ± 0.0
1.64MetGln: 1.64 ± 0.0
1.64MetArg: 1.64 ± 0.0
2.296MetSer: 2.296 ± 0.0
1.64MetThr: 1.64 ± 0.0
1.968MetVal: 1.968 ± 0.0
0.328MetTrp: 0.328 ± 0.0
1.312MetTyr: 1.312 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.936AsnAla: 3.936 ± 0.0
0.656AsnCys: 0.656 ± 0.0
3.28AsnAsp: 3.28 ± 0.0
1.312AsnGlu: 1.312 ± 0.0
3.28AsnPhe: 3.28 ± 0.0
2.296AsnGly: 2.296 ± 0.0
0.984AsnHis: 0.984 ± 0.0
2.296AsnIle: 2.296 ± 0.0
1.968AsnLys: 1.968 ± 0.0
4.264AsnLeu: 4.264 ± 0.0
0.328AsnMet: 0.328 ± 0.0
2.296AsnAsn: 2.296 ± 0.0
1.64AsnPro: 1.64 ± 0.0
0.984AsnGln: 0.984 ± 0.0
1.968AsnArg: 1.968 ± 0.0
5.248AsnSer: 5.248 ± 0.0
1.64AsnThr: 1.64 ± 0.0
5.904AsnVal: 5.904 ± 0.0
0.984AsnTrp: 0.984 ± 0.0
2.296AsnTyr: 2.296 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.28ProAla: 3.28 ± 0.0
0.328ProCys: 0.328 ± 0.0
2.296ProAsp: 2.296 ± 0.0
1.64ProGlu: 1.64 ± 0.0
2.952ProPhe: 2.952 ± 0.0
2.296ProGly: 2.296 ± 0.0
1.968ProHis: 1.968 ± 0.0
2.952ProIle: 2.952 ± 0.0
2.624ProLys: 2.624 ± 0.0
4.264ProLeu: 4.264 ± 0.0
0.328ProMet: 0.328 ± 0.0
2.624ProAsn: 2.624 ± 0.0
1.64ProPro: 1.64 ± 0.0
1.64ProGln: 1.64 ± 0.0
1.64ProArg: 1.64 ± 0.0
4.264ProSer: 4.264 ± 0.0
2.624ProThr: 2.624 ± 0.0
1.312ProVal: 1.312 ± 0.0
0.656ProTrp: 0.656 ± 0.0
1.64ProTyr: 1.64 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.624GlnAla: 2.624 ± 0.0
0.656GlnCys: 0.656 ± 0.0
1.64GlnAsp: 1.64 ± 0.0
0.984GlnGlu: 0.984 ± 0.0
2.624GlnPhe: 2.624 ± 0.0
3.608GlnGly: 3.608 ± 0.0
0.984GlnHis: 0.984 ± 0.0
5.576GlnIle: 5.576 ± 0.0
1.64GlnLys: 1.64 ± 0.0
3.608GlnLeu: 3.608 ± 0.0
2.952GlnMet: 2.952 ± 0.0
0.984GlnAsn: 0.984 ± 0.0
1.312GlnPro: 1.312 ± 0.0
1.64GlnGln: 1.64 ± 0.0
1.968GlnArg: 1.968 ± 0.0
2.624GlnSer: 2.624 ± 0.0
1.312GlnThr: 1.312 ± 0.0
3.28GlnVal: 3.28 ± 0.0
0.328GlnTrp: 0.328 ± 0.0
1.968GlnTyr: 1.968 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.264ArgAla: 4.264 ± 0.0
0.984ArgCys: 0.984 ± 0.0
2.624ArgAsp: 2.624 ± 0.0
3.28ArgGlu: 3.28 ± 0.0
3.608ArgPhe: 3.608 ± 0.0
2.624ArgGly: 2.624 ± 0.0
1.64ArgHis: 1.64 ± 0.0
2.624ArgIle: 2.624 ± 0.0
4.592ArgLys: 4.592 ± 0.0
4.264ArgLeu: 4.264 ± 0.0
2.296ArgMet: 2.296 ± 0.0
2.296ArgAsn: 2.296 ± 0.0
1.312ArgPro: 1.312 ± 0.0
1.968ArgGln: 1.968 ± 0.0
4.592ArgArg: 4.592 ± 0.0
1.968ArgSer: 1.968 ± 0.0
1.64ArgThr: 1.64 ± 0.0
4.264ArgVal: 4.264 ± 0.0
0.328ArgTrp: 0.328 ± 0.0
4.264ArgTyr: 4.264 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.248SerAla: 5.248 ± 0.0
0.984SerCys: 0.984 ± 0.0
5.248SerAsp: 5.248 ± 0.0
6.56SerGlu: 6.56 ± 0.0
4.592SerPhe: 4.592 ± 0.0
5.904SerGly: 5.904 ± 0.0
1.64SerHis: 1.64 ± 0.0
3.936SerIle: 3.936 ± 0.0
3.28SerLys: 3.28 ± 0.0
4.92SerLeu: 4.92 ± 0.0
2.296SerMet: 2.296 ± 0.0
2.952SerAsn: 2.952 ± 0.0
1.968SerPro: 1.968 ± 0.0
1.968SerGln: 1.968 ± 0.0
3.608SerArg: 3.608 ± 0.0
5.576SerSer: 5.576 ± 0.0
2.296SerThr: 2.296 ± 0.0
7.543SerVal: 7.543 ± 0.0
0.984SerTrp: 0.984 ± 0.0
3.28SerTyr: 3.28 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.296ThrAla: 2.296 ± 0.0
0.328ThrCys: 0.328 ± 0.0
1.312ThrAsp: 1.312 ± 0.0
1.968ThrGlu: 1.968 ± 0.0
3.28ThrPhe: 3.28 ± 0.0
3.608ThrGly: 3.608 ± 0.0
0.984ThrHis: 0.984 ± 0.0
2.952ThrIle: 2.952 ± 0.0
2.624ThrLys: 2.624 ± 0.0
2.296ThrLeu: 2.296 ± 0.0
1.312ThrMet: 1.312 ± 0.0
1.312ThrAsn: 1.312 ± 0.0
1.968ThrPro: 1.968 ± 0.0
1.312ThrGln: 1.312 ± 0.0
1.968ThrArg: 1.968 ± 0.0
3.608ThrSer: 3.608 ± 0.0
2.624ThrThr: 2.624 ± 0.0
4.592ThrVal: 4.592 ± 0.0
0.984ThrTrp: 0.984 ± 0.0
0.984ThrTyr: 0.984 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.888ValAla: 6.888 ± 0.0
1.64ValCys: 1.64 ± 0.0
2.624ValAsp: 2.624 ± 0.0
4.264ValGlu: 4.264 ± 0.0
3.936ValPhe: 3.936 ± 0.0
5.904ValGly: 5.904 ± 0.0
1.312ValHis: 1.312 ± 0.0
3.936ValIle: 3.936 ± 0.0
5.576ValLys: 5.576 ± 0.0
6.888ValLeu: 6.888 ± 0.0
1.312ValMet: 1.312 ± 0.0
3.608ValAsn: 3.608 ± 0.0
4.92ValPro: 4.92 ± 0.0
1.312ValGln: 1.312 ± 0.0
2.624ValArg: 2.624 ± 0.0
4.592ValSer: 4.592 ± 0.0
5.248ValThr: 5.248 ± 0.0
5.904ValVal: 5.904 ± 0.0
0.328ValTrp: 0.328 ± 0.0
3.608ValTyr: 3.608 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.312TrpAla: 1.312 ± 0.0
0.656TrpCys: 0.656 ± 0.0
0.328TrpAsp: 0.328 ± 0.0
0.328TrpGlu: 0.328 ± 0.0
0.656TrpPhe: 0.656 ± 0.0
1.64TrpGly: 1.64 ± 0.0
0.656TrpHis: 0.656 ± 0.0
0.656TrpIle: 0.656 ± 0.0
0.656TrpLys: 0.656 ± 0.0
0.984TrpLeu: 0.984 ± 0.0
0.328TrpMet: 0.328 ± 0.0
1.968TrpAsn: 1.968 ± 0.0
0.656TrpPro: 0.656 ± 0.0
0.984TrpGln: 0.984 ± 0.0
1.968TrpArg: 1.968 ± 0.0
0.656TrpSer: 0.656 ± 0.0
0.0TrpThr: 0.0 ± 0.0
0.328TrpVal: 0.328 ± 0.0
0.328TrpTrp: 0.328 ± 0.0
0.984TrpTyr: 0.984 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.64TyrAla: 1.64 ± 0.0
1.64TyrCys: 1.64 ± 0.0
1.968TyrAsp: 1.968 ± 0.0
1.64TyrGlu: 1.64 ± 0.0
2.296TyrPhe: 2.296 ± 0.0
2.624TyrGly: 2.624 ± 0.0
0.656TyrHis: 0.656 ± 0.0
1.312TyrIle: 1.312 ± 0.0
3.28TyrLys: 3.28 ± 0.0
4.592TyrLeu: 4.592 ± 0.0
0.984TyrMet: 0.984 ± 0.0
1.968TyrAsn: 1.968 ± 0.0
1.312TyrPro: 1.312 ± 0.0
1.64TyrGln: 1.64 ± 0.0
1.968TyrArg: 1.968 ± 0.0
2.296TyrSer: 2.296 ± 0.0
0.984TyrThr: 0.984 ± 0.0
3.608TyrVal: 3.608 ± 0.0
1.64TyrTrp: 1.64 ± 0.0
0.656TyrTyr: 0.656 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3050 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski