Tenacibaculum phage pT24

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Kungbxnavirus; Tenacibaculum virus pT24

Average proteome isoelectric point is 6.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 297 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B4XWQ7|A0A1B4XWQ7_9CAUD Uncharacterized protein OS=Tenacibaculum phage pT24 OX=1880590 GN=BPT24_100 PE=4 SV=1
MM1 pKa = 7.07IKK3 pKa = 9.96EE4 pKa = 4.16RR5 pKa = 11.84KK6 pKa = 8.79FDD8 pKa = 3.66QNGEE12 pKa = 4.18YY13 pKa = 9.92PIEE16 pKa = 4.16EE17 pKa = 4.68SNFEE21 pKa = 4.33LFSGKK26 pKa = 10.43DD27 pKa = 3.28NVYY30 pKa = 11.0SSIVEE35 pKa = 4.04IKK37 pKa = 9.71TKK39 pKa = 10.66DD40 pKa = 3.67GNKK43 pKa = 9.92HH44 pKa = 4.45YY45 pKa = 9.63ATYY48 pKa = 10.91NITEE52 pKa = 4.63DD53 pKa = 3.71VFKK56 pKa = 10.97LIPNINDD63 pKa = 3.35DD64 pKa = 4.08SVEE67 pKa = 4.17HH68 pKa = 5.98GVEE71 pKa = 4.14GTGDD75 pKa = 3.78NLPSEE80 pKa = 5.1NVEE83 pKa = 3.56TWKK86 pKa = 10.38PYY88 pKa = 10.66LCLTTLVDD96 pKa = 4.28EE97 pKa = 4.89LQGTCKK103 pKa = 10.66SLDD106 pKa = 3.75EE107 pKa = 4.56ACEE110 pKa = 4.09TQHH113 pKa = 6.89IDD115 pKa = 4.4CFEE118 pKa = 4.75LNIDD122 pKa = 3.95EE123 pKa = 5.3LGKK126 pKa = 10.04IDD128 pKa = 5.57NEE130 pKa = 4.02IFNCAEE136 pKa = 4.23CGWWCEE142 pKa = 3.76ISEE145 pKa = 4.08QAEE148 pKa = 4.26DD149 pKa = 4.68GDD151 pKa = 5.14DD152 pKa = 4.14SVCVDD157 pKa = 3.65CCEE160 pKa = 3.83

Molecular weight: 18.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1W7GKP2|A0A1W7GKP2_9CAUD Site-specific DNA-methyltransferase (adenine-specific) OS=Tenacibaculum phage pT24 OX=1880590 GN=BPT24_034 PE=4 SV=1
MM1 pKa = 7.66KK2 pKa = 10.12IKK4 pKa = 10.44SLKK7 pKa = 10.15DD8 pKa = 3.1PKK10 pKa = 10.38FRR12 pKa = 11.84QTWGSHH18 pKa = 4.57SNTSRR23 pKa = 11.84RR24 pKa = 11.84ALNKK28 pKa = 9.96KK29 pKa = 8.27FTMCCGVRR37 pKa = 11.84NCNYY41 pKa = 9.79SSRR44 pKa = 11.84AYY46 pKa = 10.48RR47 pKa = 11.84ITDD50 pKa = 3.63SQSKK54 pKa = 5.78THH56 pKa = 6.24NSSYY60 pKa = 10.58RR61 pKa = 11.84CPKK64 pKa = 10.52HH65 pKa = 6.61GDD67 pKa = 3.31TLILIGDD74 pKa = 4.35VMQLPRR80 pKa = 11.84NRR82 pKa = 11.84RR83 pKa = 11.84KK84 pKa = 10.28RR85 pKa = 11.84NLLIKK90 pKa = 10.35KK91 pKa = 9.03FRR93 pKa = 3.85

Molecular weight: 10.98 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

297

0

297

72176

26

3229

243.0

27.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.665 ± 0.165

0.921 ± 0.064

6.911 ± 0.139

7.5 ± 0.212

5.115 ± 0.109

5.326 ± 0.326

1.642 ± 0.052

8.129 ± 0.118

9.227 ± 0.359

8.402 ± 0.145

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.584 ± 0.114

7.364 ± 0.206

2.38 ± 0.073

2.688 ± 0.065

3.584 ± 0.111

7.192 ± 0.173

5.757 ± 0.223

6.03 ± 0.117

0.844 ± 0.035

4.74 ± 0.111
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski