Sophora alopecuroides yellow stunt alphasatellite 8

Taxonomy: Viruses; Alphasatellitidae; Nanoalphasatellitinae; Clostunsatellite; Sophora yellow stunt alphasatellite 5

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1W5YSH3|A0A1W5YSH3_9VIRU Satellite replication initiator protein OS=Sophora alopecuroides yellow stunt alphasatellite 8 OX=1980173 PE=4 SV=1
MM1 pKa = 7.98PSQKK5 pKa = 8.99STCWVFTLNFEE16 pKa = 4.51GDD18 pKa = 3.83PPTLTFDD25 pKa = 5.33DD26 pKa = 4.08RR27 pKa = 11.84VQYY30 pKa = 11.05ASWQHH35 pKa = 5.1EE36 pKa = 4.64RR37 pKa = 11.84VGHH40 pKa = 5.97DD41 pKa = 3.24HH42 pKa = 6.69LQGFIQFKK50 pKa = 10.55SRR52 pKa = 11.84NTTMGQCKK60 pKa = 9.83AQFNGLSPHH69 pKa = 6.95LEE71 pKa = 3.61IARR74 pKa = 11.84DD75 pKa = 3.61VNKK78 pKa = 10.54AQEE81 pKa = 4.13YY82 pKa = 8.8TMKK85 pKa = 10.39EE86 pKa = 4.06DD87 pKa = 3.49TRR89 pKa = 11.84IAGPWEE95 pKa = 3.9YY96 pKa = 11.4GVMIKK101 pKa = 10.33KK102 pKa = 10.28GSHH105 pKa = 4.91KK106 pKa = 10.1RR107 pKa = 11.84KK108 pKa = 9.94LMEE111 pKa = 4.6KK112 pKa = 10.26FEE114 pKa = 4.53EE115 pKa = 4.82DD116 pKa = 3.56PEE118 pKa = 4.16EE119 pKa = 4.08MKK121 pKa = 10.7IADD124 pKa = 3.53PSLYY128 pKa = 10.0RR129 pKa = 11.84RR130 pKa = 11.84CLTRR134 pKa = 11.84KK135 pKa = 8.7MSEE138 pKa = 4.1EE139 pKa = 3.94QRR141 pKa = 11.84SSAEE145 pKa = 3.47WNYY148 pKa = 11.24DD149 pKa = 3.23LRR151 pKa = 11.84PWQEE155 pKa = 3.37AVIQEE160 pKa = 4.5LEE162 pKa = 4.23LPPDD166 pKa = 3.34YY167 pKa = 10.99RR168 pKa = 11.84KK169 pKa = 10.23IIWVYY174 pKa = 10.71GPGGNEE180 pKa = 4.03GKK182 pKa = 8.49STFARR187 pKa = 11.84HH188 pKa = 6.0LSLKK192 pKa = 9.77EE193 pKa = 3.4GWGYY197 pKa = 10.96VPGGRR202 pKa = 11.84TQDD205 pKa = 3.09MMHH208 pKa = 7.46IITADD213 pKa = 3.75PKK215 pKa = 8.93NHH217 pKa = 5.83WVFDD221 pKa = 3.86VPRR224 pKa = 11.84VSSEE228 pKa = 3.72YY229 pKa = 10.22VNYY232 pKa = 10.52GVIEE236 pKa = 4.05QVKK239 pKa = 9.26NRR241 pKa = 11.84VMVNTKK247 pKa = 10.11YY248 pKa = 10.08EE249 pKa = 4.13PCVMRR254 pKa = 11.84DD255 pKa = 3.5DD256 pKa = 3.89NHH258 pKa = 6.28PVHH261 pKa = 6.57VVVFANCLPDD271 pKa = 3.58VTKK274 pKa = 10.94LSEE277 pKa = 4.03DD278 pKa = 3.48RR279 pKa = 11.84IKK281 pKa = 10.49IIKK284 pKa = 9.41CC285 pKa = 3.38

Molecular weight: 33.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1W5YSH3|A0A1W5YSH3_9VIRU Satellite replication initiator protein OS=Sophora alopecuroides yellow stunt alphasatellite 8 OX=1980173 PE=4 SV=1
MM1 pKa = 7.98PSQKK5 pKa = 8.99STCWVFTLNFEE16 pKa = 4.51GDD18 pKa = 3.83PPTLTFDD25 pKa = 5.33DD26 pKa = 4.08RR27 pKa = 11.84VQYY30 pKa = 11.05ASWQHH35 pKa = 5.1EE36 pKa = 4.64RR37 pKa = 11.84VGHH40 pKa = 5.97DD41 pKa = 3.24HH42 pKa = 6.69LQGFIQFKK50 pKa = 10.55SRR52 pKa = 11.84NTTMGQCKK60 pKa = 9.83AQFNGLSPHH69 pKa = 6.95LEE71 pKa = 3.61IARR74 pKa = 11.84DD75 pKa = 3.61VNKK78 pKa = 10.54AQEE81 pKa = 4.13YY82 pKa = 8.8TMKK85 pKa = 10.39EE86 pKa = 4.06DD87 pKa = 3.49TRR89 pKa = 11.84IAGPWEE95 pKa = 3.9YY96 pKa = 11.4GVMIKK101 pKa = 10.33KK102 pKa = 10.28GSHH105 pKa = 4.91KK106 pKa = 10.1RR107 pKa = 11.84KK108 pKa = 9.94LMEE111 pKa = 4.6KK112 pKa = 10.26FEE114 pKa = 4.53EE115 pKa = 4.82DD116 pKa = 3.56PEE118 pKa = 4.16EE119 pKa = 4.08MKK121 pKa = 10.7IADD124 pKa = 3.53PSLYY128 pKa = 10.0RR129 pKa = 11.84RR130 pKa = 11.84CLTRR134 pKa = 11.84KK135 pKa = 8.7MSEE138 pKa = 4.1EE139 pKa = 3.94QRR141 pKa = 11.84SSAEE145 pKa = 3.47WNYY148 pKa = 11.24DD149 pKa = 3.23LRR151 pKa = 11.84PWQEE155 pKa = 3.37AVIQEE160 pKa = 4.5LEE162 pKa = 4.23LPPDD166 pKa = 3.34YY167 pKa = 10.99RR168 pKa = 11.84KK169 pKa = 10.23IIWVYY174 pKa = 10.71GPGGNEE180 pKa = 4.03GKK182 pKa = 8.49STFARR187 pKa = 11.84HH188 pKa = 6.0LSLKK192 pKa = 9.77EE193 pKa = 3.4GWGYY197 pKa = 10.96VPGGRR202 pKa = 11.84TQDD205 pKa = 3.09MMHH208 pKa = 7.46IITADD213 pKa = 3.75PKK215 pKa = 8.93NHH217 pKa = 5.83WVFDD221 pKa = 3.86VPRR224 pKa = 11.84VSSEE228 pKa = 3.72YY229 pKa = 10.22VNYY232 pKa = 10.52GVIEE236 pKa = 4.05QVKK239 pKa = 9.26NRR241 pKa = 11.84VMVNTKK247 pKa = 10.11YY248 pKa = 10.08EE249 pKa = 4.13PCVMRR254 pKa = 11.84DD255 pKa = 3.5DD256 pKa = 3.89NHH258 pKa = 6.28PVHH261 pKa = 6.57VVVFANCLPDD271 pKa = 3.58VTKK274 pKa = 10.94LSEE277 pKa = 4.03DD278 pKa = 3.48RR279 pKa = 11.84IKK281 pKa = 10.49IIKK284 pKa = 9.41CC285 pKa = 3.38

Molecular weight: 33.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

285

285

285

285.0

33.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.86 ± 0.0

2.105 ± 0.0

5.965 ± 0.0

8.07 ± 0.0

3.509 ± 0.0

5.965 ± 0.0

3.509 ± 0.0

4.912 ± 0.0

7.368 ± 0.0

5.263 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.86 ± 0.0

4.211 ± 0.0

5.965 ± 0.0

4.561 ± 0.0

6.316 ± 0.0

5.263 ± 0.0

4.912 ± 0.0

7.719 ± 0.0

2.807 ± 0.0

3.86 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski