Ecklonia radiata-associated virus 3

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.34

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G2CHQ9|A0A3G2CHQ9_9CIRC Rep-C OS=Ecklonia radiata-associated virus 3 OX=2480193 PE=4 SV=1
MM1 pKa = 7.57AATAPSRR8 pKa = 11.84QSRR11 pKa = 11.84HH12 pKa = 5.31RR13 pKa = 11.84RR14 pKa = 11.84WCFTLNSPVFSLNYY28 pKa = 10.1YY29 pKa = 10.43SILEE33 pKa = 4.21NVSKK37 pKa = 10.85RR38 pKa = 11.84FVFGLEE44 pKa = 3.9RR45 pKa = 11.84APTTGRR51 pKa = 11.84QHH53 pKa = 5.66LQGYY57 pKa = 9.49LEE59 pKa = 4.15FANPSGFGRR68 pKa = 11.84VSKK71 pKa = 10.34LLPAHH76 pKa = 6.93WEE78 pKa = 3.79PARR81 pKa = 11.84GSWKK85 pKa = 10.13QNYY88 pKa = 8.65DD89 pKa = 3.42YY90 pKa = 10.86CVKK93 pKa = 10.26EE94 pKa = 4.15GSYY97 pKa = 10.78QSYY100 pKa = 10.81GDD102 pKa = 3.85WNSGVCDD109 pKa = 3.54VSRR112 pKa = 11.84SGVSNGKK119 pKa = 10.09LSVSSIVRR127 pKa = 11.84RR128 pKa = 11.84LVYY131 pKa = 10.18HH132 pKa = 5.32QAEE135 pKa = 4.28DD136 pKa = 4.51VYY138 pKa = 11.4LSWDD142 pKa = 3.51YY143 pKa = 11.34IRR145 pKa = 11.84NKK147 pKa = 10.41KK148 pKa = 10.64SIDD151 pKa = 3.27EE152 pKa = 4.06LVYY155 pKa = 10.97KK156 pKa = 10.62FGQAKK161 pKa = 9.61LRR163 pKa = 11.84HH164 pKa = 5.4EE165 pKa = 5.26RR166 pKa = 11.84YY167 pKa = 8.48QQFYY171 pKa = 11.03HH172 pKa = 6.69SFLSDD177 pKa = 3.06WQQEE181 pKa = 4.73CILHH185 pKa = 6.64LSEE188 pKa = 3.88QGPRR192 pKa = 11.84RR193 pKa = 11.84VCWYY197 pKa = 10.1YY198 pKa = 11.27DD199 pKa = 3.4VTGGTGKK206 pKa = 10.52SFLANILFSCYY217 pKa = 10.05NYY219 pKa = 10.67EE220 pKa = 4.15LFDD223 pKa = 5.56GITSSRR229 pKa = 11.84DD230 pKa = 3.0ITLMLSDD237 pKa = 4.63SFSGVCIDD245 pKa = 4.53VTRR248 pKa = 11.84DD249 pKa = 3.3DD250 pKa = 4.63NKK252 pKa = 10.73LFSYY256 pKa = 9.06STLEE260 pKa = 3.69KK261 pKa = 10.41LKK263 pKa = 10.94NGFIMTGKK271 pKa = 7.89YY272 pKa = 9.44QGYY275 pKa = 9.57KK276 pKa = 10.06RR277 pKa = 11.84LFAVKK282 pKa = 9.63PVIVFANFEE291 pKa = 4.43PDD293 pKa = 3.34TTKK296 pKa = 10.8LSSDD300 pKa = 3.67RR301 pKa = 11.84WCVHH305 pKa = 5.42SLDD308 pKa = 4.38YY309 pKa = 11.13VSQEE313 pKa = 4.27AKK315 pKa = 10.74NPLPPTPFAPPAFSEE330 pKa = 4.34EE331 pKa = 4.2DD332 pKa = 3.53PEE334 pKa = 4.19AA335 pKa = 5.56

Molecular weight: 38.56 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3G2CHQ9|A0A3G2CHQ9_9CIRC Rep-C OS=Ecklonia radiata-associated virus 3 OX=2480193 PE=4 SV=1
MM1 pKa = 7.57AATAPSRR8 pKa = 11.84QSRR11 pKa = 11.84HH12 pKa = 5.31RR13 pKa = 11.84RR14 pKa = 11.84WCFTLNSPVFSLNYY28 pKa = 10.1YY29 pKa = 10.43SILEE33 pKa = 4.21NVSKK37 pKa = 10.85RR38 pKa = 11.84FVFGLEE44 pKa = 3.9RR45 pKa = 11.84APTTGRR51 pKa = 11.84QHH53 pKa = 5.66LQGYY57 pKa = 9.49LEE59 pKa = 4.15FANPSGFGRR68 pKa = 11.84VSKK71 pKa = 10.34LLPAHH76 pKa = 6.93WEE78 pKa = 3.79PARR81 pKa = 11.84GSWKK85 pKa = 10.13QNYY88 pKa = 8.65DD89 pKa = 3.42YY90 pKa = 10.86CVKK93 pKa = 10.26EE94 pKa = 4.15GSYY97 pKa = 10.78QSYY100 pKa = 10.81GDD102 pKa = 3.85WNSGVCDD109 pKa = 3.54VSRR112 pKa = 11.84SGVSNGKK119 pKa = 10.09LSVSSIVRR127 pKa = 11.84RR128 pKa = 11.84LVYY131 pKa = 10.18HH132 pKa = 5.32QAEE135 pKa = 4.28DD136 pKa = 4.51VYY138 pKa = 11.4LSWDD142 pKa = 3.51YY143 pKa = 11.34IRR145 pKa = 11.84NKK147 pKa = 10.41KK148 pKa = 10.64SIDD151 pKa = 3.27EE152 pKa = 4.06LVYY155 pKa = 10.97KK156 pKa = 10.62FGQAKK161 pKa = 9.61LRR163 pKa = 11.84HH164 pKa = 5.4EE165 pKa = 5.26RR166 pKa = 11.84YY167 pKa = 8.48QQFYY171 pKa = 11.03HH172 pKa = 6.69SFLSDD177 pKa = 3.06WQQEE181 pKa = 4.73CILHH185 pKa = 6.64LSEE188 pKa = 3.88QGPRR192 pKa = 11.84RR193 pKa = 11.84VCWYY197 pKa = 10.1YY198 pKa = 11.27DD199 pKa = 3.4VTGGTGKK206 pKa = 10.52SFLANILFSCYY217 pKa = 10.05NYY219 pKa = 10.67EE220 pKa = 4.15LFDD223 pKa = 5.56GITSSRR229 pKa = 11.84DD230 pKa = 3.0ITLMLSDD237 pKa = 4.63SFSGVCIDD245 pKa = 4.53VTRR248 pKa = 11.84DD249 pKa = 3.3DD250 pKa = 4.63NKK252 pKa = 10.73LFSYY256 pKa = 9.06STLEE260 pKa = 3.69KK261 pKa = 10.41LKK263 pKa = 10.94NGFIMTGKK271 pKa = 7.89YY272 pKa = 9.44QGYY275 pKa = 9.57KK276 pKa = 10.06RR277 pKa = 11.84LFAVKK282 pKa = 9.63PVIVFANFEE291 pKa = 4.43PDD293 pKa = 3.34TTKK296 pKa = 10.8LSSDD300 pKa = 3.67RR301 pKa = 11.84WCVHH305 pKa = 5.42SLDD308 pKa = 4.38YY309 pKa = 11.13VSQEE313 pKa = 4.27AKK315 pKa = 10.74NPLPPTPFAPPAFSEE330 pKa = 4.34EE331 pKa = 4.2DD332 pKa = 3.53PEE334 pKa = 4.19AA335 pKa = 5.56

Molecular weight: 38.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

335

335

335

335.0

38.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.776 ± 0.0

2.388 ± 0.0

5.373 ± 0.0

5.075 ± 0.0

5.97 ± 0.0

6.269 ± 0.0

2.388 ± 0.0

3.284 ± 0.0

5.373 ± 0.0

8.358 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

0.896 ± 0.0

4.179 ± 0.0

4.776 ± 0.0

4.179 ± 0.0

6.269 ± 0.0

11.045 ± 0.0

4.179 ± 0.0

6.567 ± 0.0

2.388 ± 0.0

6.269 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski