Capybara microvirus Cap3_SP_588

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVV0|A0A4V1FVV0_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_588 OX=2585480 PE=4 SV=1
MM1 pKa = 8.34VEE3 pKa = 4.47MYY5 pKa = 10.57AIYY8 pKa = 10.55DD9 pKa = 3.78PVSEE13 pKa = 4.36SVKK16 pKa = 9.96TPFFIEE22 pKa = 4.55NYY24 pKa = 8.83ASCIRR29 pKa = 11.84AIADD33 pKa = 3.7AYY35 pKa = 10.05NHH37 pKa = 6.33NLFADD42 pKa = 4.47GAKK45 pKa = 10.37DD46 pKa = 4.23VEE48 pKa = 4.35LLSYY52 pKa = 11.08GLIQNDD58 pKa = 3.66GNFYY62 pKa = 10.54PVDD65 pKa = 3.41TDD67 pKa = 3.17IYY69 pKa = 9.27EE70 pKa = 4.54SNGVLVPKK78 pKa = 10.76NFGKK82 pKa = 10.49VFEE85 pKa = 5.09LIKK88 pKa = 11.05DD89 pKa = 3.38EE90 pKa = 5.09SEE92 pKa = 3.98RR93 pKa = 11.84LKK95 pKa = 11.32NGG97 pKa = 3.09

Molecular weight: 10.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVV0|A0A4V1FVV0_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_588 OX=2585480 PE=4 SV=1
MM1 pKa = 7.67CLNPKK6 pKa = 9.57KK7 pKa = 10.49AYY9 pKa = 10.23LMNYY13 pKa = 9.57KK14 pKa = 9.94KK15 pKa = 10.7DD16 pKa = 3.53NNKK19 pKa = 9.89NVILFNKK26 pKa = 9.86PIYY29 pKa = 9.79QDD31 pKa = 2.51WHH33 pKa = 5.56KK34 pKa = 10.3IKK36 pKa = 10.73RR37 pKa = 11.84EE38 pKa = 3.6IYY40 pKa = 9.51IPCGICKK47 pKa = 8.91EE48 pKa = 4.47CKK50 pKa = 9.18MSHH53 pKa = 5.88AFDD56 pKa = 3.16WVVRR60 pKa = 11.84CTAEE64 pKa = 4.05SLCYY68 pKa = 9.46EE69 pKa = 3.92NNYY72 pKa = 9.76FVTLTYY78 pKa = 11.19DD79 pKa = 3.23NDD81 pKa = 4.74KK82 pKa = 11.24IPMTPYY88 pKa = 10.57FGDD91 pKa = 4.37DD92 pKa = 4.14DD93 pKa = 4.99SCFMIPTLRR102 pKa = 11.84YY103 pKa = 9.75KK104 pKa = 10.56DD105 pKa = 3.44VQDD108 pKa = 3.47FFKK111 pKa = 10.82RR112 pKa = 11.84LRR114 pKa = 11.84SKK116 pKa = 11.13LDD118 pKa = 3.33YY119 pKa = 10.86NDD121 pKa = 3.76NGNVRR126 pKa = 11.84HH127 pKa = 5.74FTCSEE132 pKa = 3.95YY133 pKa = 11.23GGITQRR139 pKa = 11.84PHH141 pKa = 4.53YY142 pKa = 10.12HH143 pKa = 6.56SILFGINLTDD153 pKa = 3.8LKK155 pKa = 10.91YY156 pKa = 10.85YY157 pKa = 10.8KK158 pKa = 9.38KK159 pKa = 9.24TEE161 pKa = 4.19NGDD164 pKa = 3.19ILYY167 pKa = 9.42TSKK170 pKa = 10.98LLSDD174 pKa = 4.12CWQNGFVIVGEE185 pKa = 4.11VTPEE189 pKa = 3.86SIAYY193 pKa = 8.53VSRR196 pKa = 11.84YY197 pKa = 7.77SLKK200 pKa = 10.11KK201 pKa = 10.34QVDD204 pKa = 3.81EE205 pKa = 4.95TYY207 pKa = 11.12SSYY210 pKa = 11.06HH211 pKa = 6.24LSDD214 pKa = 3.49FRR216 pKa = 11.84EE217 pKa = 4.22SPKK220 pKa = 10.71LYY222 pKa = 8.77MSRR225 pKa = 11.84RR226 pKa = 11.84PGIGAPYY233 pKa = 8.92YY234 pKa = 9.77EE235 pKa = 4.5KK236 pKa = 10.81HH237 pKa = 6.04QIHH240 pKa = 6.42NKK242 pKa = 5.85WQKK245 pKa = 11.03LYY247 pKa = 11.08LNSDD251 pKa = 4.2LKK253 pKa = 11.39DD254 pKa = 3.06IDD256 pKa = 3.72YY257 pKa = 9.45PKK259 pKa = 10.81YY260 pKa = 9.43FLSMLEE266 pKa = 4.07INDD269 pKa = 3.42EE270 pKa = 4.13EE271 pKa = 5.68LYY273 pKa = 10.32IDD275 pKa = 4.38YY276 pKa = 10.04MNNKK280 pKa = 9.99DD281 pKa = 4.45KK282 pKa = 11.21INEE285 pKa = 3.99IKK287 pKa = 10.88ANAYY291 pKa = 10.08YY292 pKa = 9.8PDD294 pKa = 4.48EE295 pKa = 4.26KK296 pKa = 10.45TEE298 pKa = 4.06SYY300 pKa = 10.47RR301 pKa = 11.84LEE303 pKa = 4.1VQARR307 pKa = 11.84KK308 pKa = 10.14YY309 pKa = 10.89KK310 pKa = 10.39FDD312 pKa = 3.47NGYY315 pKa = 10.58LSIRR319 pKa = 11.84NEE321 pKa = 3.97VV322 pKa = 2.98

Molecular weight: 38.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1369

97

579

273.8

31.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.501 ± 1.557

0.95 ± 0.538

6.793 ± 0.465

5.186 ± 0.638

5.186 ± 0.522

6.355 ± 0.773

1.899 ± 0.288

6.209 ± 0.325

5.698 ± 1.691

6.501 ± 0.43

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.899 ± 0.235

7.889 ± 0.724

4.602 ± 0.825

3.725 ± 0.808

4.018 ± 0.593

8.4 ± 0.778

4.894 ± 0.572

5.478 ± 0.801

1.242 ± 0.328

6.574 ± 0.975
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski