Simian adenovirus 49

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Simian mastadenovirus B

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 32 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F2WTJ7|F2WTJ7_9ADEN E1B protein small T-antigen OS=Simian adenovirus 49 OX=995022 PE=3 SV=1
MM1 pKa = 7.0KK2 pKa = 9.53TWGLDD7 pKa = 3.14CGLYY11 pKa = 9.18PQEE14 pKa = 3.58VDD16 pKa = 2.4EE17 pKa = 4.49WLRR20 pKa = 11.84TEE22 pKa = 4.05YY23 pKa = 10.86CPTPGYY29 pKa = 10.42YY30 pKa = 10.54GEE32 pKa = 4.46NLSLHH37 pKa = 6.87DD38 pKa = 5.51LYY40 pKa = 11.22DD41 pKa = 4.31IDD43 pKa = 4.54VDD45 pKa = 4.07APADD49 pKa = 3.66GDD51 pKa = 4.01EE52 pKa = 4.69NEE54 pKa = 4.39VPVNDD59 pKa = 5.0FFPDD63 pKa = 3.6SLLLAVDD70 pKa = 3.7EE71 pKa = 5.48GIEE74 pKa = 4.12VDD76 pKa = 4.46YY77 pKa = 10.27PPPLDD82 pKa = 3.78TPGEE86 pKa = 4.06PSGSHH91 pKa = 6.62FMPDD95 pKa = 3.13LSAEE99 pKa = 4.13EE100 pKa = 3.93VDD102 pKa = 5.15LYY104 pKa = 10.87CHH106 pKa = 6.96EE107 pKa = 5.83DD108 pKa = 3.54GFPPSDD114 pKa = 3.72SEE116 pKa = 4.73GEE118 pKa = 3.84QSEE121 pKa = 4.17ARR123 pKa = 11.84EE124 pKa = 4.0EE125 pKa = 3.95RR126 pKa = 11.84LMAEE130 pKa = 4.36AAATGAAAAARR141 pKa = 11.84RR142 pKa = 11.84AWEE145 pKa = 4.02EE146 pKa = 3.72EE147 pKa = 4.28EE148 pKa = 4.97FRR150 pKa = 11.84LDD152 pKa = 3.87CPVLPGHH159 pKa = 6.75GCASCDD165 pKa = 3.6YY166 pKa = 10.14HH167 pKa = 7.61RR168 pKa = 11.84KK169 pKa = 7.47TSGFPEE175 pKa = 4.42IMCSLCYY182 pKa = 10.31LRR184 pKa = 11.84AHH186 pKa = 6.23GMFVYY191 pKa = 10.59SPVSDD196 pKa = 4.25AEE198 pKa = 4.36GEE200 pKa = 4.05PDD202 pKa = 3.28STTGHH207 pKa = 5.96SGGPGSPPKK216 pKa = 10.46LHH218 pKa = 5.97NTPPRR223 pKa = 11.84NVPRR227 pKa = 11.84PVPLRR232 pKa = 11.84VSGVRR237 pKa = 11.84RR238 pKa = 11.84AAVEE242 pKa = 4.17SLHH245 pKa = 7.17DD246 pKa = 4.69LIGGEE251 pKa = 4.18EE252 pKa = 4.19EE253 pKa = 4.24QVVPLDD259 pKa = 4.32LSAKK263 pKa = 9.66RR264 pKa = 11.84PRR266 pKa = 11.84HH267 pKa = 4.71

Molecular weight: 29.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F2WTL0|F2WTL0_9ADEN Hexon protein OS=Simian adenovirus 49 OX=995022 GN=L3 PE=2 SV=1
MM1 pKa = 7.74ALTCRR6 pKa = 11.84VRR8 pKa = 11.84IPVPGYY14 pKa = 9.27RR15 pKa = 11.84GRR17 pKa = 11.84SHH19 pKa = 6.73RR20 pKa = 11.84RR21 pKa = 11.84HH22 pKa = 5.65RR23 pKa = 11.84RR24 pKa = 11.84GLAGRR29 pKa = 11.84GLRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AVRR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84MRR42 pKa = 11.84GGVLPLLIPLIAAAIGAVPGIASVALQASRR72 pKa = 11.84KK73 pKa = 7.38NN74 pKa = 3.5

Molecular weight: 8.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

27

5

32

11246

74

1201

351.4

39.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.257 ± 0.503

1.858 ± 0.296

4.571 ± 0.321

5.887 ± 0.476

3.672 ± 0.203

6.216 ± 0.356

2.392 ± 0.243

2.908 ± 0.188

2.863 ± 0.242

10.857 ± 0.469

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.099 ± 0.204

3.779 ± 0.416

7.585 ± 0.432

4.482 ± 0.255

8.038 ± 0.686

6.598 ± 0.457

5.406 ± 0.436

6.705 ± 0.387

1.334 ± 0.11

3.495 ± 0.292
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski