Streptococcus phage Javan226

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 53 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D6AZ58|A0A4D6AZ58_9CAUD Uncharacterized protein OS=Streptococcus phage Javan226 OX=2548055 GN=Javan226_0033 PE=4 SV=1
MM1 pKa = 7.88TIPKK5 pKa = 9.57FRR7 pKa = 11.84VYY9 pKa = 11.1DD10 pKa = 3.47KK11 pKa = 10.83VEE13 pKa = 4.16RR14 pKa = 11.84MMITTSDD21 pKa = 3.91YY22 pKa = 11.53EE23 pKa = 4.16DD24 pKa = 5.06LSDD27 pKa = 5.21LFCFLKK33 pKa = 10.78ADD35 pKa = 4.27ADD37 pKa = 3.6TGYY40 pKa = 10.83YY41 pKa = 9.49SEE43 pKa = 5.61LMQSTGLYY51 pKa = 7.91TVPLCPGLDD60 pKa = 3.66YY61 pKa = 10.85EE62 pKa = 4.53RR63 pKa = 11.84KK64 pKa = 10.0EE65 pKa = 3.92IFEE68 pKa = 4.2GDD70 pKa = 3.21ILKK73 pKa = 9.71WYY75 pKa = 8.68YY76 pKa = 10.99SEE78 pKa = 5.92GIEE81 pKa = 4.53LQQQGTFVVVFEE93 pKa = 4.76NGAFRR98 pKa = 11.84PNKK101 pKa = 10.33GNDD104 pKa = 3.05ITLHH108 pKa = 6.34EE109 pKa = 4.49MLEE112 pKa = 4.35DD113 pKa = 4.32CDD115 pKa = 3.63WAEE118 pKa = 4.46VIGNLYY124 pKa = 9.8EE125 pKa = 4.19NPEE128 pKa = 3.83ILEE131 pKa = 4.06EE132 pKa = 4.41LEE134 pKa = 4.03

Molecular weight: 15.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D6AUK2|A0A4D6AUK2_9CAUD Uncharacterized protein OS=Streptococcus phage Javan226 OX=2548055 GN=Javan226_0012 PE=4 SV=1
MM1 pKa = 7.5VINSNDD7 pKa = 3.3RR8 pKa = 11.84FHH10 pKa = 6.99RR11 pKa = 11.84QAQAVMTRR19 pKa = 11.84RR20 pKa = 11.84IKK22 pKa = 10.54ALAMYY27 pKa = 8.98EE28 pKa = 4.15VTAKK32 pKa = 10.12KK33 pKa = 10.14DD34 pKa = 3.39KK35 pKa = 10.51QMKK38 pKa = 8.88PFSPEE43 pKa = 3.97RR44 pKa = 11.84PCHH47 pKa = 6.81LIVTVYY53 pKa = 10.74KK54 pKa = 8.57PTNRR58 pKa = 11.84RR59 pKa = 11.84LDD61 pKa = 3.66TPNLYY66 pKa = 8.39PTVKK70 pKa = 10.53ALVDD74 pKa = 3.55GMTEE78 pKa = 3.96AKK80 pKa = 9.77IWTDD84 pKa = 4.01DD85 pKa = 3.4NDD87 pKa = 3.75NVIKK91 pKa = 9.64STKK94 pKa = 8.97FQLGGLSGKK103 pKa = 9.62KK104 pKa = 9.49GYY106 pKa = 10.32YY107 pKa = 9.6RR108 pKa = 11.84FVLTVEE114 pKa = 4.5EE115 pKa = 4.55VV116 pKa = 2.92

Molecular weight: 13.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

53

0

53

11371

48

1523

214.5

24.03

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.976 ± 0.862

0.413 ± 0.086

5.98 ± 0.314

7.317 ± 0.74

3.931 ± 0.269

6.191 ± 0.49

1.161 ± 0.176

6.947 ± 0.301

8.311 ± 0.566

7.783 ± 0.234

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.506 ± 0.232

5.998 ± 0.499

2.55 ± 0.17

4.327 ± 0.285

3.395 ± 0.231

6.842 ± 0.602

6.657 ± 0.651

6.561 ± 0.264

0.967 ± 0.139

4.186 ± 0.465
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski