Apis mellifera associated microvirus 7

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3Q8U5A1|A0A3Q8U5A1_9VIRU Uncharacterized protein OS=Apis mellifera associated microvirus 7 OX=2494794 PE=4 SV=1
MM1 pKa = 6.79YY2 pKa = 10.31ACAVFDD8 pKa = 4.22KK9 pKa = 10.86KK10 pKa = 11.12VNAYY14 pKa = 7.72MYY16 pKa = 9.58PQFFRR21 pKa = 11.84TKK23 pKa = 10.56GEE25 pKa = 3.94ATRR28 pKa = 11.84SFMDD32 pKa = 3.34AVGAEE37 pKa = 3.71AAPFRR42 pKa = 11.84KK43 pKa = 9.42HH44 pKa = 6.84AEE46 pKa = 4.17DD47 pKa = 4.54YY48 pKa = 9.74VFCYY52 pKa = 10.27LGQYY56 pKa = 10.49DD57 pKa = 4.9DD58 pKa = 3.81NTGQFEE64 pKa = 4.33NAPGNLPEE72 pKa = 4.84ILMTAMDD79 pKa = 5.11CLTIDD84 pKa = 3.76GAVNN88 pKa = 3.44

Molecular weight: 9.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3S8UTL2|A0A3S8UTL2_9VIRU DNA pilot protein OS=Apis mellifera associated microvirus 7 OX=2494794 PE=4 SV=1
MM1 pKa = 7.37SCYY4 pKa = 10.61GPIAAYY10 pKa = 9.87RR11 pKa = 11.84PPRR14 pKa = 11.84KK15 pKa = 9.81EE16 pKa = 4.12GGDD19 pKa = 3.28KK20 pKa = 10.73RR21 pKa = 11.84LVFDD25 pKa = 4.19PRR27 pKa = 11.84KK28 pKa = 9.83SEE30 pKa = 3.72TGVRR34 pKa = 11.84MLIPCGRR41 pKa = 11.84CTGCRR46 pKa = 11.84LEE48 pKa = 5.96RR49 pKa = 11.84SRR51 pKa = 11.84QWAMRR56 pKa = 11.84CMHH59 pKa = 7.32EE60 pKa = 4.29KK61 pKa = 10.47QMHH64 pKa = 5.76NASSFLTLTYY74 pKa = 11.13DD75 pKa = 4.63DD76 pKa = 4.31VNLPEE81 pKa = 5.1GGSLCMDD88 pKa = 4.49HH89 pKa = 6.14YY90 pKa = 11.19QKK92 pKa = 10.88FMKK95 pKa = 10.34RR96 pKa = 11.84LRR98 pKa = 11.84HH99 pKa = 5.68RR100 pKa = 11.84FGDD103 pKa = 4.4GIRR106 pKa = 11.84FCGCGEE112 pKa = 4.12YY113 pKa = 11.03GDD115 pKa = 4.1VTSRR119 pKa = 11.84PHH121 pKa = 5.02YY122 pKa = 10.47HH123 pKa = 6.95ILLLNVDD130 pKa = 4.22FGDD133 pKa = 3.34RR134 pKa = 11.84RR135 pKa = 11.84FYY137 pKa = 10.9KK138 pKa = 10.41SSEE141 pKa = 3.95GSGLPLYY148 pKa = 10.34VSKK151 pKa = 10.34EE152 pKa = 3.99LSSLWPYY159 pKa = 10.87GFSNLGDD166 pKa = 3.4VDD168 pKa = 4.85FDD170 pKa = 3.62SCAYY174 pKa = 8.0VARR177 pKa = 11.84YY178 pKa = 9.09VMKK181 pKa = 10.5KK182 pKa = 10.6VIGNDD187 pKa = 3.26TFDD190 pKa = 3.26SSLYY194 pKa = 10.14DD195 pKa = 3.34WEE197 pKa = 4.31TGIVKK202 pKa = 8.61EE203 pKa = 4.26APFMTMSRR211 pKa = 11.84RR212 pKa = 11.84PGLGSSWYY220 pKa = 10.24KK221 pKa = 10.76KK222 pKa = 10.35FGAHH226 pKa = 6.02AYY228 pKa = 8.65EE229 pKa = 4.09WDD231 pKa = 3.61SVVFKK236 pKa = 10.7GVEE239 pKa = 3.91VPPPRR244 pKa = 11.84FYY246 pKa = 11.32DD247 pKa = 3.49SLRR250 pKa = 11.84IGPAINDD257 pKa = 3.39NLKK260 pKa = 10.14KK261 pKa = 10.05KK262 pKa = 9.88RR263 pKa = 11.84RR264 pKa = 11.84RR265 pKa = 11.84KK266 pKa = 9.5AALKK270 pKa = 10.52RR271 pKa = 11.84ADD273 pKa = 3.44NTLARR278 pKa = 11.84LRR280 pKa = 11.84VKK282 pKa = 10.43EE283 pKa = 4.19VVALARR289 pKa = 11.84LNLKK293 pKa = 9.87GRR295 pKa = 11.84SLL297 pKa = 3.67

Molecular weight: 34.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1425

88

533

237.5

26.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.895 ± 1.926

1.684 ± 0.668

5.474 ± 0.442

4.491 ± 0.895

4.842 ± 0.504

7.579 ± 0.421

1.965 ± 0.265

3.368 ± 0.44

3.789 ± 0.893

8.281 ± 0.5

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.368 ± 0.447

4.842 ± 0.554

5.544 ± 1.011

3.719 ± 0.724

6.947 ± 0.956

7.93 ± 0.818

4.632 ± 0.697

7.088 ± 0.533

0.982 ± 0.367

3.579 ± 0.788
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski