Lysinibacillus antri

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3826 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A432LD64|A0A432LD64_9BACI Uncharacterized protein OS=Lysinibacillus antri OX=2498145 GN=EK386_08520 PE=4 SV=1
MM1 pKa = 7.49AAEE4 pKa = 3.99QRR6 pKa = 11.84LSQVLTKK13 pKa = 10.74KK14 pKa = 10.33LGYY17 pKa = 9.09YY18 pKa = 9.95VPISEE23 pKa = 5.11IGYY26 pKa = 5.95EE27 pKa = 4.51TIWFMKK33 pKa = 10.72DD34 pKa = 2.81EE35 pKa = 4.56VDD37 pKa = 3.97NKK39 pKa = 10.62LIPPQIIEE47 pKa = 4.78HH48 pKa = 6.78LAQPIIANSASFTDD62 pKa = 3.5ADD64 pKa = 3.61GNYY67 pKa = 9.08YY68 pKa = 10.42LVIIIEE74 pKa = 4.18IGLPEE79 pKa = 4.97PYY81 pKa = 10.05EE82 pKa = 3.88VWLVNDD88 pKa = 4.9EE89 pKa = 4.21IVSDD93 pKa = 3.79FLGDD97 pKa = 3.23VDD99 pKa = 4.37

Molecular weight: 11.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A432L934|A0A432L934_9BACI Uncharacterized protein OS=Lysinibacillus antri OX=2498145 GN=EK386_14720 PE=4 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.54QPKK8 pKa = 9.44KK9 pKa = 7.96RR10 pKa = 11.84KK11 pKa = 8.69HH12 pKa = 5.94SKK14 pKa = 8.54VHH16 pKa = 5.68GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTKK25 pKa = 10.19NGRR28 pKa = 11.84KK29 pKa = 8.91VLAARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.81GRR39 pKa = 11.84KK40 pKa = 8.75VLSAA44 pKa = 4.05

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3826

0

3826

1143930

33

2801

299.0

33.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.882 ± 0.041

0.695 ± 0.011

4.981 ± 0.03

7.629 ± 0.045

4.623 ± 0.032

6.464 ± 0.04

2.033 ± 0.021

8.355 ± 0.042

6.812 ± 0.033

9.701 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.657 ± 0.024

4.854 ± 0.033

3.411 ± 0.025

3.915 ± 0.032

3.785 ± 0.032

6.002 ± 0.03

5.674 ± 0.035

7.065 ± 0.034

0.93 ± 0.015

3.533 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski