Tannerella sp. oral taxon 808

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Tannerellaceae; Tannerella; unclassified Tannerella

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1968 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2N8NL91|A0A2N8NL91_9BACT 30S ribosomal protein S18 OS=Tannerella sp. oral taxon 808 OX=712711 GN=rpsR PE=3 SV=1
MM1 pKa = 7.73RR2 pKa = 11.84KK3 pKa = 9.13YY4 pKa = 10.49RR5 pKa = 11.84CTVCDD10 pKa = 3.77YY11 pKa = 10.76IYY13 pKa = 10.64DD14 pKa = 4.11PEE16 pKa = 5.15VGDD19 pKa = 4.16PDD21 pKa = 4.6GGIDD25 pKa = 3.47PGTAFEE31 pKa = 5.39EE32 pKa = 4.74IPDD35 pKa = 3.73DD36 pKa = 4.16WVCPLCGVGKK46 pKa = 10.53EE47 pKa = 4.22DD48 pKa = 4.73FEE50 pKa = 4.75PVV52 pKa = 2.91

Molecular weight: 5.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2N8N8Z9|A0A2N8N8Z9_9BACT DZANK-type domain-containing protein OS=Tannerella sp. oral taxon 808 OX=712711 GN=BHU16_02795 PE=4 SV=1
MM1 pKa = 6.96TTTLLTTLAVLFGILMLVLTLRR23 pKa = 11.84EE24 pKa = 4.01KK25 pKa = 10.16QRR27 pKa = 11.84EE28 pKa = 3.96RR29 pKa = 11.84RR30 pKa = 11.84KK31 pKa = 10.54LSGSAPDD38 pKa = 3.28APYY41 pKa = 10.22RR42 pKa = 11.84QQPPPVNPPSTDD54 pKa = 3.45RR55 pKa = 11.84DD56 pKa = 3.95PLNDD60 pKa = 3.5IYY62 pKa = 11.32GADD65 pKa = 3.9AIARR69 pKa = 11.84CAAQLCTTEE78 pKa = 4.59GEE80 pKa = 4.26LRR82 pKa = 11.84DD83 pKa = 3.8VLRR86 pKa = 11.84DD87 pKa = 3.62IRR89 pKa = 11.84WAGYY93 pKa = 4.62TTFWMAKK100 pKa = 9.09RR101 pKa = 11.84RR102 pKa = 11.84GGYY105 pKa = 10.01RR106 pKa = 11.84NIEE109 pKa = 4.3APTPPLKK116 pKa = 10.62AIQRR120 pKa = 11.84AILDD124 pKa = 3.79RR125 pKa = 11.84LLTPLPVHH133 pKa = 6.18TAATGFRR140 pKa = 11.84PGLSIADD147 pKa = 3.63NARR150 pKa = 11.84PHH152 pKa = 6.7LGQRR156 pKa = 11.84RR157 pKa = 11.84ALKK160 pKa = 9.8TDD162 pKa = 2.9LHH164 pKa = 7.06DD165 pKa = 3.87FFGSIRR171 pKa = 11.84RR172 pKa = 11.84PAIRR176 pKa = 11.84RR177 pKa = 11.84VFRR180 pKa = 11.84DD181 pKa = 3.17MGFDD185 pKa = 3.27AHH187 pKa = 5.7ITKK190 pKa = 10.26VLVDD194 pKa = 4.12LCTHH198 pKa = 7.01RR199 pKa = 11.84NRR201 pKa = 11.84LPQGAPTSPALSNLVAAKK219 pKa = 9.52MDD221 pKa = 3.59EE222 pKa = 4.12RR223 pKa = 11.84LTALSLRR230 pKa = 11.84RR231 pKa = 11.84GLTYY235 pKa = 10.15TRR237 pKa = 11.84YY238 pKa = 10.52ADD240 pKa = 4.44DD241 pKa = 4.12LTFSGDD247 pKa = 3.21SFNRR251 pKa = 11.84NEE253 pKa = 4.48LIADD257 pKa = 3.89IKK259 pKa = 11.03HH260 pKa = 5.67IATYY264 pKa = 10.93DD265 pKa = 3.61GFTLNAKK272 pKa = 7.98KK273 pKa = 8.7TRR275 pKa = 11.84LMASSRR281 pKa = 11.84RR282 pKa = 11.84IVTGLSIGSGEE293 pKa = 4.51KK294 pKa = 9.27LTLPRR299 pKa = 11.84EE300 pKa = 4.27RR301 pKa = 11.84KK302 pKa = 9.17RR303 pKa = 11.84EE304 pKa = 3.69IRR306 pKa = 11.84KK307 pKa = 8.87NVHH310 pKa = 5.95FVLKK314 pKa = 10.83YY315 pKa = 9.78GVTEE319 pKa = 3.61HH320 pKa = 7.31RR321 pKa = 11.84EE322 pKa = 4.27RR323 pKa = 11.84IHH325 pKa = 8.12SSDD328 pKa = 3.07PAYY331 pKa = 10.57VKK333 pKa = 10.62RR334 pKa = 11.84LIGEE338 pKa = 4.01LCFWRR343 pKa = 11.84SIEE346 pKa = 4.07PEE348 pKa = 3.93HH349 pKa = 6.68PFVNRR354 pKa = 11.84ALRR357 pKa = 11.84EE358 pKa = 3.99LRR360 pKa = 11.84ALRR363 pKa = 4.05

Molecular weight: 41.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1968

0

1968

648991

52

3042

329.8

36.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.963 ± 0.062

1.114 ± 0.02

5.808 ± 0.038

6.184 ± 0.054

4.207 ± 0.033

7.039 ± 0.044

2.224 ± 0.025

6.083 ± 0.049

4.859 ± 0.057

9.481 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.666 ± 0.027

3.739 ± 0.042

4.381 ± 0.032

3.086 ± 0.032

7.005 ± 0.052

5.513 ± 0.039

6.023 ± 0.051

6.644 ± 0.048

1.079 ± 0.019

3.9 ± 0.039
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski