Pomona bat hepatitis B virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Blubervirales; Hepadnaviridae; Orthohepadnavirus

Average proteome isoelectric point is 8.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7DQ32|A0A0A7DQ32_9HEPA DNA-directed DNA polymerase OS=Pomona bat hepatitis B virus OX=2049933 PE=3 SV=1
MM1 pKa = 7.76AARR4 pKa = 11.84LYY6 pKa = 11.12CEE8 pKa = 5.34LDD10 pKa = 3.32PSRR13 pKa = 11.84DD14 pKa = 3.65VLLLRR19 pKa = 11.84PFGAQPGGRR28 pKa = 11.84PVSRR32 pKa = 11.84FPGDD36 pKa = 3.76SNGSTASTVPPVHH49 pKa = 6.39RR50 pKa = 11.84QDD52 pKa = 3.1FALRR56 pKa = 11.84RR57 pKa = 11.84LPACAYY63 pKa = 10.34SNAGPCVLRR72 pKa = 11.84FTCAEE77 pKa = 3.74AAVNMEE83 pKa = 3.9TTMTNFVTWHH93 pKa = 5.34TARR96 pKa = 11.84QRR98 pKa = 11.84GTVTQTLNSWQWYY111 pKa = 8.95FGQLLMNQWEE121 pKa = 4.34EE122 pKa = 4.25TGWDD126 pKa = 3.64DD127 pKa = 5.84RR128 pKa = 11.84IIAYY132 pKa = 10.07VLGGCRR138 pKa = 11.84HH139 pKa = 6.37KK140 pKa = 11.13LRR142 pKa = 5.47

Molecular weight: 16.01 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7DQC0|A0A0A7DQC0_9HEPA External core antigen OS=Pomona bat hepatitis B virus OX=2049933 GN=C PE=3 SV=1
MM1 pKa = 7.55HH2 pKa = 7.82PFSQLFQSIQSLEE15 pKa = 4.11EE16 pKa = 4.42GEE18 pKa = 4.59VEE20 pKa = 4.27QLLGPPEE27 pKa = 4.38DD28 pKa = 4.57ALPLLADD35 pKa = 3.84ANLNHH40 pKa = 6.66RR41 pKa = 11.84VAEE44 pKa = 4.07EE45 pKa = 4.32LLLQLPLHH53 pKa = 6.24AEE55 pKa = 3.76IWVHH59 pKa = 6.08KK60 pKa = 10.62AGGLTGLYY68 pKa = 9.74SEE70 pKa = 5.12KK71 pKa = 10.54PKK73 pKa = 10.56IFNPEE78 pKa = 3.15WKK80 pKa = 8.77TPSFPNIHH88 pKa = 6.47LRR90 pKa = 11.84HH91 pKa = 6.63DD92 pKa = 3.78LCEE95 pKa = 5.37HH96 pKa = 5.87IDD98 pKa = 3.61SRR100 pKa = 11.84IGLTKK105 pKa = 10.22GEE107 pKa = 3.86KK108 pKa = 9.78RR109 pKa = 11.84RR110 pKa = 11.84FKK112 pKa = 10.82LCLPARR118 pKa = 11.84FFPNKK123 pKa = 8.53TKK125 pKa = 10.77YY126 pKa = 10.22FPLHH130 pKa = 5.72NAIKK134 pKa = 10.3NYY136 pKa = 10.35YY137 pKa = 8.12PDD139 pKa = 3.18HH140 pKa = 6.37TLTHH144 pKa = 6.93FFHH147 pKa = 6.52TAHH150 pKa = 6.33YY151 pKa = 10.36LWTLWEE157 pKa = 4.25SGVTYY162 pKa = 10.69LRR164 pKa = 11.84TSQSSASFNGQSYY177 pKa = 8.76PWEE180 pKa = 4.46QKK182 pKa = 9.78HH183 pKa = 5.4HH184 pKa = 4.65THH186 pKa = 6.75GKK188 pKa = 7.25QQISSQSLRR197 pKa = 11.84LPPRR201 pKa = 11.84SPATNSPKK209 pKa = 9.96FRR211 pKa = 11.84GLGKK215 pKa = 10.18ILGPKK220 pKa = 8.23SAKK223 pKa = 10.15GSLAPSIGTLSGSLGTKK240 pKa = 10.07SSPSSWGSTWNRR252 pKa = 11.84RR253 pKa = 11.84EE254 pKa = 4.09FSGSPYY260 pKa = 10.11QYY262 pKa = 10.6QKK264 pKa = 11.06YY265 pKa = 9.48RR266 pKa = 11.84RR267 pKa = 11.84NNQNYY272 pKa = 8.58YY273 pKa = 9.26RR274 pKa = 11.84QKK276 pKa = 7.76TTNNYY281 pKa = 9.36YY282 pKa = 10.58KK283 pKa = 10.61NKK285 pKa = 9.23QDD287 pKa = 4.88QSIYY291 pKa = 9.64WNNANKK297 pKa = 9.9TNITSHH303 pKa = 6.27TSIQSPKK310 pKa = 10.06GASTNAPDD318 pKa = 3.62ITSKK322 pKa = 9.96TDD324 pKa = 2.9SSTSQYY330 pKa = 10.62EE331 pKa = 3.76QDD333 pKa = 3.91LEE335 pKa = 4.63TEE337 pKa = 4.3VRR339 pKa = 11.84QPDD342 pKa = 3.96NSCPWLFFNHH352 pKa = 5.97SPACGRR358 pKa = 11.84YY359 pKa = 9.31CLRR362 pKa = 11.84QCLLLLSDD370 pKa = 4.24WGPCHH375 pKa = 6.75RR376 pKa = 11.84HH377 pKa = 5.42GDD379 pKa = 3.72HH380 pKa = 8.01LIRR383 pKa = 11.84TPRR386 pKa = 11.84TPRR389 pKa = 11.84RR390 pKa = 11.84ISGGVFLVDD399 pKa = 3.54KK400 pKa = 10.57NPNNRR405 pKa = 11.84TEE407 pKa = 3.84SRR409 pKa = 11.84LVVDD413 pKa = 5.53FSQFSRR419 pKa = 11.84GNTRR423 pKa = 11.84VQWPKK428 pKa = 10.19FAVPNLQALTNLLSSNLSWLSLDD451 pKa = 3.44VSAAFYY457 pKa = 9.93HH458 pKa = 6.73IPLSPAAMPHH468 pKa = 6.39LLVGSPGLEE477 pKa = 3.7GLASCMSPKK486 pKa = 9.38STNNNHH492 pKa = 6.07QEE494 pKa = 4.08MQHH497 pKa = 5.46LHH499 pKa = 5.34SLCGRR504 pKa = 11.84RR505 pKa = 11.84NLLGLLLLFKK515 pKa = 9.84TCRR518 pKa = 11.84RR519 pKa = 11.84KK520 pKa = 8.58QTLLGHH526 pKa = 5.9SFFKK530 pKa = 10.76GFRR533 pKa = 11.84KK534 pKa = 9.91IPTGVGLSPILLAPFPSALASVVRR558 pKa = 11.84RR559 pKa = 11.84TFPHH563 pKa = 6.58CLAFTYY569 pKa = 10.09MDD571 pKa = 4.38DD572 pKa = 3.8VVLGATTPPHH582 pKa = 6.63LEE584 pKa = 3.64SVYY587 pKa = 11.26ASVCSLFSDD596 pKa = 4.42LGIVLNPDD604 pKa = 2.8KK605 pKa = 10.83TKK607 pKa = 9.36WWGKK611 pKa = 8.82HH612 pKa = 4.06LQFMGLLITPSGTLPQSKK630 pKa = 7.16QQKK633 pKa = 8.22WAIQLLKK640 pKa = 10.68ALPCYY645 pKa = 10.25TIFDD649 pKa = 3.79WKK651 pKa = 10.31ILQRR655 pKa = 11.84LTGLLGFLAPFTACGYY671 pKa = 7.21PALMPLYY678 pKa = 10.4HH679 pKa = 7.76AITQKK684 pKa = 10.97NGFEE688 pKa = 4.06FSPAYY693 pKa = 9.78KK694 pKa = 10.59GFLLRR699 pKa = 11.84LYY701 pKa = 10.38SRR703 pKa = 11.84PLHH706 pKa = 5.4VVRR709 pKa = 11.84QRR711 pKa = 11.84SSTCQVFADD720 pKa = 4.26ATPTGWGLVNHH731 pKa = 5.94QLALYY736 pKa = 10.16KK737 pKa = 10.21SGRR740 pKa = 11.84FPRR743 pKa = 11.84PLPIHH748 pKa = 5.89HH749 pKa = 7.41AEE751 pKa = 4.71LIAAILARR759 pKa = 11.84CWSGAKK765 pKa = 10.49LLGTDD770 pKa = 3.34NTIVCSHH777 pKa = 6.99KK778 pKa = 9.65FTHH781 pKa = 6.59FPWLLGCTANWILRR795 pKa = 11.84EE796 pKa = 3.91TSFCYY801 pKa = 10.56VPSEE805 pKa = 4.58LNPADD810 pKa = 3.74APSRR814 pKa = 11.84GFLGIRR820 pKa = 11.84TAPPPLRR827 pKa = 11.84FRR829 pKa = 11.84PSTGRR834 pKa = 11.84TSLFVVSPPAPTRR847 pKa = 11.84MPDD850 pKa = 2.88RR851 pKa = 11.84VSFVSPVQKK860 pKa = 10.5RR861 pKa = 11.84LSTWRR866 pKa = 11.84PPP868 pKa = 3.22

Molecular weight: 97.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1642

142

868

410.5

46.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.725 ± 0.382

2.741 ± 0.338

2.862 ± 0.147

2.984 ± 0.392

4.75 ± 0.279

6.395 ± 0.344

3.228 ± 0.58

3.837 ± 0.39

4.019 ± 0.748

12.119 ± 0.488

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.34 ± 0.264

4.141 ± 0.402

8.709 ± 0.431

4.202 ± 0.233

6.456 ± 0.917

8.952 ± 0.493

7.734 ± 0.655

4.141 ± 0.47

3.167 ± 0.526

2.497 ± 0.426
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski