Celeribacter marinus

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Celeribacter

Average proteome isoelectric point is 6.2

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3134 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0P0A1A4|A0A0P0A1A4_9RHOB Uncharacterized protein OS=Celeribacter marinus OX=1397108 GN=IMCC12053_16 PE=4 SV=1
MM1 pKa = 7.24ATYY4 pKa = 10.3ILKK7 pKa = 10.63GYY9 pKa = 9.25AASSLSSTSGNLTAQVGHH27 pKa = 6.04VWRR30 pKa = 11.84LDD32 pKa = 3.78PSWDD36 pKa = 3.44NSNDD40 pKa = 3.1HH41 pKa = 6.28LTYY44 pKa = 10.38TINDD48 pKa = 3.61DD49 pKa = 3.77DD50 pKa = 4.14VRR52 pKa = 11.84FGGDD56 pKa = 2.97ATINEE61 pKa = 4.36VGDD64 pKa = 5.1DD65 pKa = 3.85FTQTAVVTNVSGGTVASGGVYY86 pKa = 10.65LEE88 pKa = 4.37DD89 pKa = 4.83QITLSDD95 pKa = 3.73GQGNLFDD102 pKa = 4.23VYY104 pKa = 10.79SVEE107 pKa = 4.21IGGTQVGVVSNPEE120 pKa = 3.94LVPGVTYY127 pKa = 10.37QVSSVSNVSAFNLPDD142 pKa = 3.87YY143 pKa = 11.47VDD145 pKa = 4.0MATPTYY151 pKa = 10.86DD152 pKa = 3.66PDD154 pKa = 4.22LAQTYY159 pKa = 10.85NGGAYY164 pKa = 9.96NDD166 pKa = 4.44EE167 pKa = 4.26IVAGAGDD174 pKa = 4.55DD175 pKa = 4.37IINAGAGADD184 pKa = 3.99SIEE187 pKa = 4.41GGAGNDD193 pKa = 3.52TIYY196 pKa = 10.9YY197 pKa = 6.62GTGGATQADD206 pKa = 4.5GDD208 pKa = 4.36TVYY211 pKa = 11.07GGDD214 pKa = 4.1GDD216 pKa = 6.2DD217 pKa = 5.14IIDD220 pKa = 4.32DD221 pKa = 3.93EE222 pKa = 5.68AVVQHH227 pKa = 6.56NYY229 pKa = 10.99DD230 pKa = 3.37DD231 pKa = 3.96TLYY234 pKa = 11.16GGAGNDD240 pKa = 3.5TIYY243 pKa = 11.09AGGGDD248 pKa = 3.83DD249 pKa = 4.97EE250 pKa = 5.63VYY252 pKa = 11.35GDD254 pKa = 5.47ADD256 pKa = 3.68NDD258 pKa = 4.39WIHH261 pKa = 6.97GEE263 pKa = 4.11GGHH266 pKa = 7.17DD267 pKa = 3.76EE268 pKa = 4.29LHH270 pKa = 6.72GGTGDD275 pKa = 3.46DD276 pKa = 4.15TIYY279 pKa = 11.24GGDD282 pKa = 4.04GYY284 pKa = 11.24DD285 pKa = 5.61LIWGDD290 pKa = 4.65DD291 pKa = 4.11GNDD294 pKa = 3.31TLYY297 pKa = 11.27GGNDD301 pKa = 3.76DD302 pKa = 3.7DD303 pKa = 4.98TIYY306 pKa = 11.07GGAGIDD312 pKa = 3.75VLYY315 pKa = 11.07GDD317 pKa = 5.3AGNDD321 pKa = 3.73TLSGDD326 pKa = 3.35AGGDD330 pKa = 3.36HH331 pKa = 7.45LYY333 pKa = 11.15GGTGNDD339 pKa = 3.42TMSGGTGNDD348 pKa = 2.65SFYY351 pKa = 11.46VLEE354 pKa = 4.81GDD356 pKa = 4.3GTSTMYY362 pKa = 11.24GDD364 pKa = 5.56DD365 pKa = 4.0DD366 pKa = 4.15WDD368 pKa = 4.08TVDD371 pKa = 4.65FAYY374 pKa = 9.53STGSAVDD381 pKa = 3.43VTYY384 pKa = 11.18SGDD387 pKa = 3.41NAFNFAFDD395 pKa = 3.96TGNSSGSGNSMEE407 pKa = 4.68NFILTGQNDD416 pKa = 4.05TVDD419 pKa = 3.63ASLDD423 pKa = 3.73ATGATYY429 pKa = 10.66DD430 pKa = 4.44LRR432 pKa = 11.84AGDD435 pKa = 3.89DD436 pKa = 3.71TFTGGSGNDD445 pKa = 3.14AVYY448 pKa = 10.61GGDD451 pKa = 3.63GADD454 pKa = 4.08TITLGAGGDD463 pKa = 3.93YY464 pKa = 11.39AEE466 pKa = 5.31GGAGNDD472 pKa = 4.05TIYY475 pKa = 11.44GDD477 pKa = 4.85AGEE480 pKa = 4.48DD481 pKa = 3.51WIEE484 pKa = 4.24GGTGNDD490 pKa = 3.32TLYY493 pKa = 11.28GGDD496 pKa = 3.73DD497 pKa = 3.94ADD499 pKa = 3.72TFFYY503 pKa = 10.99SDD505 pKa = 2.85GWGSDD510 pKa = 3.4TVFGGAGISDD520 pKa = 4.57ADD522 pKa = 3.78TLDD525 pKa = 3.7FSNVTTDD532 pKa = 3.25VTVTFSDD539 pKa = 3.89WEE541 pKa = 4.71DD542 pKa = 3.39GTATSGADD550 pKa = 2.98SVNFDD555 pKa = 3.95NIEE558 pKa = 4.4AIRR561 pKa = 11.84GGSGADD567 pKa = 3.73TIDD570 pKa = 3.79ASPDD574 pKa = 3.31GSGLLLDD581 pKa = 5.1GGDD584 pKa = 4.12GGDD587 pKa = 3.91TIIGGSGDD595 pKa = 3.73DD596 pKa = 3.85EE597 pKa = 5.88LYY599 pKa = 11.23GGDD602 pKa = 4.42GVDD605 pKa = 3.68TLFGGAGNDD614 pKa = 3.98AIDD617 pKa = 4.19GGRR620 pKa = 11.84GDD622 pKa = 3.86DD623 pKa = 4.44TITGGAGDD631 pKa = 4.12DD632 pKa = 4.62TITSSNGQDD641 pKa = 2.75TMVFADD647 pKa = 4.44GFGNDD652 pKa = 4.39IITDD656 pKa = 4.3FDD658 pKa = 4.07FTDD661 pKa = 4.05SNSDD665 pKa = 3.35GYY667 pKa = 9.63TDD669 pKa = 4.16DD670 pKa = 3.94QLDD673 pKa = 3.65VSALTDD679 pKa = 3.47SDD681 pKa = 4.3GNPVNAWDD689 pKa = 4.33VVVSDD694 pKa = 5.17DD695 pKa = 4.01GLGNAVLTFPNGEE708 pKa = 4.57SITLTGIAPTQVDD721 pKa = 4.55GAQQMHH727 pKa = 7.52AIGIPCFVSGTRR739 pKa = 11.84IMTPSGNRR747 pKa = 11.84LIEE750 pKa = 4.09EE751 pKa = 4.4LRR753 pKa = 11.84HH754 pKa = 5.69GDD756 pKa = 4.05LVSTLNSGAQPILWAGRR773 pKa = 11.84TTLKK777 pKa = 10.35RR778 pKa = 11.84ARR780 pKa = 11.84LALQPDD786 pKa = 4.75LLPIRR791 pKa = 11.84IRR793 pKa = 11.84DD794 pKa = 3.75GTLGNSGDD802 pKa = 3.7LWVSPQHH809 pKa = 6.59GLVLPDD815 pKa = 4.03LCSHH819 pKa = 6.81AKK821 pKa = 10.45AGVLVRR827 pKa = 11.84AKK829 pKa = 10.41HH830 pKa = 5.46LLEE833 pKa = 5.93HH834 pKa = 6.59GDD836 pKa = 3.36GRR838 pKa = 11.84VRR840 pKa = 11.84RR841 pKa = 11.84AKK843 pKa = 10.23GSRR846 pKa = 11.84DD847 pKa = 3.25VTYY850 pKa = 10.73HH851 pKa = 6.4HH852 pKa = 7.25LLLPRR857 pKa = 11.84HH858 pKa = 5.86ALILANGCASEE869 pKa = 4.26SLFPGRR875 pKa = 11.84FALSGFDD882 pKa = 3.19RR883 pKa = 11.84AAKK886 pKa = 10.62AEE888 pKa = 4.1LFDD891 pKa = 5.35LFPALEE897 pKa = 4.51TILRR901 pKa = 11.84SGAPATDD908 pKa = 3.61AARR911 pKa = 11.84MYY913 pKa = 8.49GQPVLRR919 pKa = 11.84FAKK922 pKa = 10.19GRR924 pKa = 11.84DD925 pKa = 2.85WRR927 pKa = 11.84AGHH930 pKa = 6.19IRR932 pKa = 11.84LPKK935 pKa = 9.96RR936 pKa = 11.84AA937 pKa = 3.85

Molecular weight: 96.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0P0ADR4|A0A0P0ADR4_9RHOB Sorbitol-6-phosphate 2-dehydrogenase OS=Celeribacter marinus OX=1397108 GN=IMCC12053_2686 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLVRR12 pKa = 11.84KK13 pKa = 9.18RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.42GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.37AGRR28 pKa = 11.84KK29 pKa = 8.54ILNARR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 9.07SLSAA44 pKa = 3.93

Molecular weight: 5.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3134

0

3134

909897

37

2082

290.3

31.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.03 ± 0.062

0.882 ± 0.014

6.405 ± 0.051

5.571 ± 0.042

3.811 ± 0.027

8.413 ± 0.046

2.114 ± 0.024

5.556 ± 0.033

3.68 ± 0.037

9.518 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.931 ± 0.024

2.837 ± 0.024

4.589 ± 0.034

3.194 ± 0.024

6.073 ± 0.041

5.471 ± 0.035

5.894 ± 0.037

7.476 ± 0.033

1.284 ± 0.018

2.272 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski