Sinosporangium album

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Streptosporangiales; Streptosporangiaceae; Sinosporangium

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6239 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G7ZRL7|A0A1G7ZRL7_9ACTN DNA-binding transcriptional regulator LysR family OS=Sinosporangium album OX=504805 GN=SAMN05421505_111173 PE=3 SV=1
MM1 pKa = 7.58KK2 pKa = 10.37ISVDD6 pKa = 3.42YY7 pKa = 10.67DD8 pKa = 3.67LCEE11 pKa = 4.48SNALCMEE18 pKa = 4.75IAPEE22 pKa = 4.03VFEE25 pKa = 4.93VRR27 pKa = 11.84DD28 pKa = 3.84DD29 pKa = 3.69NFLYY33 pKa = 11.04VLDD36 pKa = 4.87EE37 pKa = 4.68SPAQAVWPQVEE48 pKa = 4.37DD49 pKa = 4.03ALRR52 pKa = 11.84ACPKK56 pKa = 10.14GAISIEE62 pKa = 4.27DD63 pKa = 3.25

Molecular weight: 7.06 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G8B453|A0A1G8B453_9ACTN LacI family transcriptional regulator OS=Sinosporangium album OX=504805 GN=SAMN05421505_113121 PE=4 SV=1
MM1 pKa = 7.62LSGPRR6 pKa = 11.84ARR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84SVKK13 pKa = 10.07RR14 pKa = 11.84IQRR17 pKa = 11.84PVVRR21 pKa = 11.84TGLRR25 pKa = 11.84VPLAGEE31 pKa = 4.06RR32 pKa = 11.84AMSGAMSGAVPRR44 pKa = 11.84ALSRR48 pKa = 11.84TGSLSRR54 pKa = 11.84TGSLSRR60 pKa = 11.84TGSLSRR66 pKa = 11.84TGSLSRR72 pKa = 11.84TGSVGHH78 pKa = 5.78TVRR81 pKa = 11.84GHH83 pKa = 5.27RR84 pKa = 11.84RR85 pKa = 11.84PRR87 pKa = 11.84RR88 pKa = 11.84GRR90 pKa = 11.84IRR92 pKa = 11.84ARR94 pKa = 11.84TAEE97 pKa = 4.19VVKK100 pKa = 10.48RR101 pKa = 11.84ATRR104 pKa = 11.84GAGSGTQFIPKK115 pKa = 9.4LRR117 pKa = 11.84LVFLPPSS124 pKa = 3.5

Molecular weight: 13.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6239

0

6239

2028968

25

10262

325.2

34.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.298 ± 0.064

0.799 ± 0.009

5.846 ± 0.027

5.639 ± 0.031

2.769 ± 0.017

9.328 ± 0.041

2.324 ± 0.016

3.615 ± 0.029

2.155 ± 0.026

10.267 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.893 ± 0.014

1.79 ± 0.016

6.171 ± 0.035

2.597 ± 0.017

8.303 ± 0.033

5.253 ± 0.022

5.822 ± 0.029

8.592 ± 0.031

1.497 ± 0.013

2.042 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski