Aspergillus homomorphus (strain CBS 101889)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus homomorphus

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11360 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A395HQW8|A0A395HQW8_ASPHC Co-chaperone Hsc20 OS=Aspergillus homomorphus (strain CBS 101889) OX=1450537 GN=BO97DRAFT_407786 PE=3 SV=1
MM1 pKa = 7.83ADD3 pKa = 3.95DD4 pKa = 4.82ALSIYY9 pKa = 10.64DD10 pKa = 4.0EE11 pKa = 4.57IEE13 pKa = 4.35IEE15 pKa = 6.07DD16 pKa = 3.67MTFDD20 pKa = 4.29PNLQIYY26 pKa = 9.03HH27 pKa = 5.7YY28 pKa = 8.84PCPCGDD34 pKa = 3.52RR35 pKa = 11.84FEE37 pKa = 4.77IAIDD41 pKa = 3.76DD42 pKa = 4.15LRR44 pKa = 11.84DD45 pKa = 3.75GEE47 pKa = 5.2DD48 pKa = 2.94IAVCPSCSLMIRR60 pKa = 11.84VIFDD64 pKa = 3.07EE65 pKa = 4.9GDD67 pKa = 3.3LVKK70 pKa = 10.93DD71 pKa = 3.58DD72 pKa = 5.2DD73 pKa = 4.84KK74 pKa = 11.72NGSAGAVAVQAA85 pKa = 4.56

Molecular weight: 9.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A395HQA1|A0A395HQA1_ASPHC Lumazine-binding protein OS=Aspergillus homomorphus (strain CBS 101889) OX=1450537 GN=BO97DRAFT_373533 PE=4 SV=1
MM1 pKa = 7.88PSHH4 pKa = 6.91KK5 pKa = 10.39SFRR8 pKa = 11.84TKK10 pKa = 10.45QKK12 pKa = 9.54LAKK15 pKa = 9.74AQRR18 pKa = 11.84QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TGNTIRR36 pKa = 11.84YY37 pKa = 5.79NAKK40 pKa = 8.89RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.14WRR45 pKa = 11.84KK46 pKa = 7.41TRR48 pKa = 11.84LGII51 pKa = 4.46

Molecular weight: 6.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11360

0

11360

5329795

50

7149

469.2

51.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.776 ± 0.022

1.314 ± 0.01

5.514 ± 0.017

6.074 ± 0.026

3.706 ± 0.013

6.753 ± 0.021

2.524 ± 0.009

4.813 ± 0.014

4.307 ± 0.018

9.257 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.124 ± 0.008

3.468 ± 0.01

6.089 ± 0.024

4.086 ± 0.019

6.298 ± 0.019

8.29 ± 0.027

6.065 ± 0.015

6.228 ± 0.016

1.481 ± 0.008

2.832 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski