Diaminobutyricibacter tongyongensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Microbacteriaceae; Diaminobutyricibacter

Average proteome isoelectric point is 6.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3799 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6L9XSM7|A0A6L9XSM7_9MICO Response regulator transcription factor OS=Diaminobutyricibacter tongyongensis OX=1268043 GN=G3T36_00865 PE=4 SV=1
MM1 pKa = 7.84DD2 pKa = 3.86TTDD5 pKa = 3.54GATGGTGIDD14 pKa = 3.6QGNVQQPSAAHH25 pKa = 5.86SGVSRR30 pKa = 11.84GRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84VVVLSAALAATVVAGATAGVAANGFASRR63 pKa = 11.84SAAAASTSSTSANIHH78 pKa = 5.86NALGPGSYY86 pKa = 10.58GYY88 pKa = 10.64GGYY91 pKa = 10.92GSGGYY96 pKa = 9.59GGYY99 pKa = 10.35GGYY102 pKa = 10.94ASGGYY107 pKa = 10.24GSGGYY112 pKa = 9.86GSSSGSTGSAALASATPAEE131 pKa = 4.41EE132 pKa = 4.11VGVVDD137 pKa = 3.51ITSEE141 pKa = 3.9LTYY144 pKa = 10.61QQAEE148 pKa = 4.28SAGTGLVLTSDD159 pKa = 4.83GEE161 pKa = 4.28ILTNNHH167 pKa = 4.8VVAGATSISVTVVSTGATFTATVVGTDD194 pKa = 3.25ATDD197 pKa = 4.88DD198 pKa = 3.57IAVLHH203 pKa = 6.53LSNASGLSTAHH214 pKa = 7.36LDD216 pKa = 3.85TSNSPAVGDD225 pKa = 3.7AVTGVGNAGGTGGTPSASPGTVTALDD251 pKa = 3.59QTITTQAEE259 pKa = 4.24GSAASEE265 pKa = 4.16TLNGLIEE272 pKa = 4.27TDD274 pKa = 3.59ADD276 pKa = 3.55IQAGDD281 pKa = 3.23SGGPLFNSADD291 pKa = 3.58QVIGIDD297 pKa = 3.32TAAASGGATPAGYY310 pKa = 10.33AIPIRR315 pKa = 11.84SALAVAGEE323 pKa = 4.32IVAGHH328 pKa = 7.03ASSTVTIGYY337 pKa = 7.9PAFLGVEE344 pKa = 4.42VGSSADD350 pKa = 3.31GTAAATPGAAIAGVIDD366 pKa = 4.3GSPAATAGLAAGDD379 pKa = 4.44TITALNGTTIDD390 pKa = 3.63SQQALTATLQTLAPGQRR407 pKa = 11.84VSIAWTDD414 pKa = 3.29QSGASQSAPITLASGPVAA432 pKa = 4.2

Molecular weight: 40.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6L9XVF8|A0A6L9XVF8_9MICO Alpha/beta hydrolase OS=Diaminobutyricibacter tongyongensis OX=1268043 GN=G3T36_05890 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84KK12 pKa = 8.98RR13 pKa = 11.84AKK15 pKa = 8.46THH17 pKa = 5.11GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILAARR35 pKa = 11.84RR36 pKa = 11.84TKK38 pKa = 10.79GRR40 pKa = 11.84TKK42 pKa = 10.84LSAA45 pKa = 3.61

Molecular weight: 5.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3799

0

3799

1213229

27

10786

319.4

34.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.001 ± 0.075

0.493 ± 0.009

6.007 ± 0.038

5.36 ± 0.053

3.321 ± 0.027

8.801 ± 0.056

1.976 ± 0.018

4.87 ± 0.031

2.199 ± 0.029

10.032 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.736 ± 0.02

2.328 ± 0.031

5.337 ± 0.033

2.846 ± 0.025

6.919 ± 0.058

6.06 ± 0.046

6.268 ± 0.074

8.813 ± 0.039

1.511 ± 0.023

2.122 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski