Canine papillomavirus 22

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Taupapillomavirus; unclassified Taupapillomavirus

Average proteome isoelectric point is 6.25

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346M198|A0A346M198_9PAPI Protein E6 OS=Canine papillomavirus 22 OX=2304620 GN=E6 PE=3 SV=1
MM1 pKa = 7.0MACIMRR7 pKa = 11.84TRR9 pKa = 11.84MEE11 pKa = 4.06NRR13 pKa = 11.84CIFAILKK20 pKa = 6.02QTPVALAPEE29 pKa = 4.91AYY31 pKa = 10.22GEE33 pKa = 4.08FCIRR37 pKa = 11.84MSACLPLFLARR48 pKa = 11.84DD49 pKa = 3.79PVPRR53 pKa = 11.84PPAAPTPGPGGDD65 pKa = 3.3RR66 pKa = 11.84IGPRR70 pKa = 11.84PHH72 pKa = 6.82NPQDD76 pKa = 3.82PNQAPPPQPDD86 pKa = 3.18TRR88 pKa = 11.84GDD90 pKa = 3.55RR91 pKa = 11.84QSPGGGEE98 pKa = 3.76QGPGDD103 pKa = 4.35EE104 pKa = 4.59EE105 pKa = 6.37DD106 pKa = 3.64EE107 pKa = 6.04DD108 pKa = 4.23EE109 pKa = 6.57DD110 pKa = 4.3EE111 pKa = 6.27DD112 pKa = 4.58EE113 pKa = 5.44DD114 pKa = 5.11RR115 pKa = 11.84PPPPPPPPAACNCQGRR131 pKa = 11.84TPQRR135 pKa = 11.84EE136 pKa = 3.47RR137 pKa = 11.84DD138 pKa = 3.06RR139 pKa = 11.84RR140 pKa = 11.84RR141 pKa = 11.84RR142 pKa = 11.84RR143 pKa = 11.84RR144 pKa = 11.84GRR146 pKa = 11.84ARR148 pKa = 11.84LRR150 pKa = 11.84FQGPEE155 pKa = 3.64GGEE158 pKa = 3.96EE159 pKa = 3.92EE160 pKa = 4.22KK161 pKa = 10.98AHH163 pKa = 6.07YY164 pKa = 10.08EE165 pKa = 3.89EE166 pKa = 6.43AGEE169 pKa = 4.19KK170 pKa = 10.79DD171 pKa = 3.55PDD173 pKa = 3.96EE174 pKa = 4.97EE175 pKa = 5.84DD176 pKa = 3.03PHH178 pKa = 7.26QPPTEE183 pKa = 4.07EE184 pKa = 4.28EE185 pKa = 4.48KK186 pKa = 11.14EE187 pKa = 3.83NSPPHH192 pKa = 6.39KK193 pKa = 9.38PAPLRR198 pKa = 11.84RR199 pKa = 11.84PYY201 pKa = 10.55YY202 pKa = 10.15SPPPGPLGDD211 pKa = 3.77STEE214 pKa = 4.97DD215 pKa = 3.79DD216 pKa = 4.21DD217 pKa = 5.67EE218 pKa = 6.8GPASLLKK225 pKa = 10.85DD226 pKa = 4.23LGRR229 pKa = 11.84KK230 pKa = 8.27WGADD234 pKa = 3.39LDD236 pKa = 4.22ALHH239 pKa = 6.54HH240 pKa = 6.4KK241 pKa = 9.85IWGDD245 pKa = 3.51LEE247 pKa = 4.08KK248 pKa = 11.14LRR250 pKa = 11.84DD251 pKa = 3.74RR252 pKa = 11.84LGASQQ257 pKa = 3.78

Molecular weight: 28.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346M197|A0A346M197_9PAPI E4 OS=Canine papillomavirus 22 OX=2304620 PE=4 SV=1
MM1 pKa = 6.81QNLRR5 pKa = 11.84IRR7 pKa = 11.84YY8 pKa = 8.63DD9 pKa = 3.41AVQEE13 pKa = 3.99ALFAHH18 pKa = 6.39YY19 pKa = 9.71EE20 pKa = 4.04QGSKK24 pKa = 10.54SLNDD28 pKa = 3.23QVSYY32 pKa = 10.32WEE34 pKa = 3.79LRR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84EE39 pKa = 4.01SAILYY44 pKa = 6.54WARR47 pKa = 11.84KK48 pKa = 9.28NGISTLGFQPVPSLQSSEE66 pKa = 5.1ANAKK70 pKa = 9.68SAIGMSLTLQSLLASPFGQEE90 pKa = 3.56PWTLPEE96 pKa = 4.29TSLEE100 pKa = 4.1MWNTPPKK107 pKa = 10.91NCMKK111 pKa = 10.55KK112 pKa = 9.64HH113 pKa = 5.05GFTVEE118 pKa = 3.66VHH120 pKa = 6.56FDD122 pKa = 3.65NDD124 pKa = 3.66PEE126 pKa = 4.22NAFPYY131 pKa = 9.6TCWQSIYY138 pKa = 10.67YY139 pKa = 9.74QDD141 pKa = 4.39AEE143 pKa = 4.23TNEE146 pKa = 4.15WVKK149 pKa = 10.37TSGKK153 pKa = 9.1VAHH156 pKa = 7.18DD157 pKa = 3.21GMYY160 pKa = 10.87YY161 pKa = 10.05EE162 pKa = 5.78DD163 pKa = 4.93KK164 pKa = 11.01DD165 pKa = 3.8GEE167 pKa = 4.41QVYY170 pKa = 9.47FCHH173 pKa = 7.11FEE175 pKa = 3.86TDD177 pKa = 2.82ASRR180 pKa = 11.84FSTRR184 pKa = 11.84GIWRR188 pKa = 11.84VLYY191 pKa = 10.96KK192 pKa = 10.37NVCLSASVSSSGSGAPAAGGSNTGPWWGQDD222 pKa = 2.82WPEE225 pKa = 4.13APQPAGPQPSAASSTRR241 pKa = 11.84HH242 pKa = 5.25SRR244 pKa = 11.84GSPEE248 pKa = 3.53PRR250 pKa = 11.84RR251 pKa = 11.84RR252 pKa = 11.84GTGSRR257 pKa = 11.84GRR259 pKa = 11.84GGRR262 pKa = 11.84GRR264 pKa = 11.84GRR266 pKa = 11.84GRR268 pKa = 11.84GSSASPSAPACRR280 pKa = 11.84LQLPGPDD287 pKa = 3.48TPEE290 pKa = 5.62GEE292 pKa = 4.2GSEE295 pKa = 4.21EE296 pKa = 4.16EE297 pKa = 4.28EE298 pKa = 4.3EE299 pKa = 5.18GPCEE303 pKa = 4.15AEE305 pKa = 4.33VPRR308 pKa = 11.84SRR310 pKa = 11.84GRR312 pKa = 11.84GGGKK316 pKa = 9.94GPLRR320 pKa = 11.84GGRR323 pKa = 11.84GKK325 pKa = 10.4RR326 pKa = 11.84PRR328 pKa = 11.84RR329 pKa = 11.84GGPSPTTYY337 pKa = 10.05RR338 pKa = 11.84GRR340 pKa = 11.84EE341 pKa = 4.34GEE343 pKa = 4.0QSTSQTCTPPAPILQPSTGSTGGLYY368 pKa = 10.04RR369 pKa = 11.84GRR371 pKa = 11.84RR372 pKa = 11.84RR373 pKa = 11.84GPCLSPEE380 pKa = 4.34GSWSKK385 pKa = 10.66VGCRR389 pKa = 11.84PRR391 pKa = 11.84RR392 pKa = 11.84SSSQDD397 pKa = 2.96LGGPGEE403 pKa = 4.51ASGQTGRR410 pKa = 11.84VPIVVVKK417 pKa = 9.29GEE419 pKa = 4.21CNALKK424 pKa = 10.29CYY426 pKa = 10.24RR427 pKa = 11.84LRR429 pKa = 11.84LRR431 pKa = 11.84RR432 pKa = 11.84RR433 pKa = 11.84HH434 pKa = 5.26RR435 pKa = 11.84HH436 pKa = 4.03TFDD439 pKa = 4.91FISTGFGWIGGEE451 pKa = 3.86GRR453 pKa = 11.84KK454 pKa = 9.59VGRR457 pKa = 11.84QRR459 pKa = 11.84MLIAFSGYY467 pKa = 7.48DD468 pKa = 3.09QRR470 pKa = 11.84DD471 pKa = 3.44FFLGHH476 pKa = 5.32VKK478 pKa = 9.88IPKK481 pKa = 10.32LMDD484 pKa = 3.23VSLGEE489 pKa = 4.25LDD491 pKa = 3.81SLL493 pKa = 4.86

Molecular weight: 54.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2616

96

605

373.7

41.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.422 ± 0.567

2.599 ± 0.81

6.537 ± 0.788

6.307 ± 0.73

4.243 ± 0.764

8.142 ± 1.311

2.561 ± 0.38

3.593 ± 0.63

4.778 ± 0.86

8.142 ± 1.077

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.606 ± 0.433

3.211 ± 0.742

7.913 ± 1.438

4.434 ± 0.442

6.804 ± 1.075

7.645 ± 1.016

5.696 ± 0.453

5.657 ± 0.919

1.376 ± 0.311

2.332 ± 0.411
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski