Amino acid dipepetide frequency for Hubei odonate virus 4

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
2.759AlaAla: 2.759 ± 0.0
0.69AlaCys: 0.69 ± 0.0
3.448AlaAsp: 3.448 ± 0.0
3.103AlaGlu: 3.103 ± 0.0
2.759AlaPhe: 2.759 ± 0.0
4.828AlaGly: 4.828 ± 0.0
1.724AlaHis: 1.724 ± 0.0
4.138AlaIle: 4.138 ± 0.0
2.414AlaLys: 2.414 ± 0.0
4.828AlaLeu: 4.828 ± 0.0
1.724AlaMet: 1.724 ± 0.0
3.793AlaAsn: 3.793 ± 0.0
1.724AlaPro: 1.724 ± 0.0
2.069AlaGln: 2.069 ± 0.0
4.483AlaArg: 4.483 ± 0.0
4.828AlaSer: 4.828 ± 0.0
3.103AlaThr: 3.103 ± 0.0
3.793AlaVal: 3.793 ± 0.0
1.034AlaTrp: 1.034 ± 0.0
2.414AlaTyr: 2.414 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.379CysAla: 1.379 ± 0.0
0.0CysCys: 0.0 ± 0.0
1.379CysAsp: 1.379 ± 0.0
0.69CysGlu: 0.69 ± 0.0
0.69CysPhe: 0.69 ± 0.0
1.379CysGly: 1.379 ± 0.0
0.345CysHis: 0.345 ± 0.0
0.0CysIle: 0.0 ± 0.0
2.414CysLys: 2.414 ± 0.0
2.069CysLeu: 2.069 ± 0.0
0.345CysMet: 0.345 ± 0.0
1.724CysAsn: 1.724 ± 0.0
1.379CysPro: 1.379 ± 0.0
0.345CysGln: 0.345 ± 0.0
1.379CysArg: 1.379 ± 0.0
2.069CysSer: 2.069 ± 0.0
0.345CysThr: 0.345 ± 0.0
0.69CysVal: 0.69 ± 0.0
0.345CysTrp: 0.345 ± 0.0
0.345CysTyr: 0.345 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.448AspAla: 3.448 ± 0.0
0.345AspCys: 0.345 ± 0.0
3.448AspAsp: 3.448 ± 0.0
3.793AspGlu: 3.793 ± 0.0
4.138AspPhe: 4.138 ± 0.0
3.103AspGly: 3.103 ± 0.0
2.069AspHis: 2.069 ± 0.0
3.793AspIle: 3.793 ± 0.0
3.103AspLys: 3.103 ± 0.0
8.276AspLeu: 8.276 ± 0.0
1.379AspMet: 1.379 ± 0.0
2.069AspAsn: 2.069 ± 0.0
1.724AspPro: 1.724 ± 0.0
0.69AspGln: 0.69 ± 0.0
5.172AspArg: 5.172 ± 0.0
3.103AspSer: 3.103 ± 0.0
2.069AspThr: 2.069 ± 0.0
3.793AspVal: 3.793 ± 0.0
0.345AspTrp: 0.345 ± 0.0
2.759AspTyr: 2.759 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.138GluAla: 4.138 ± 0.0
1.724GluCys: 1.724 ± 0.0
5.517GluAsp: 5.517 ± 0.0
4.483GluGlu: 4.483 ± 0.0
3.793GluPhe: 3.793 ± 0.0
1.724GluGly: 1.724 ± 0.0
1.724GluHis: 1.724 ± 0.0
5.862GluIle: 5.862 ± 0.0
3.793GluLys: 3.793 ± 0.0
5.172GluLeu: 5.172 ± 0.0
2.759GluMet: 2.759 ± 0.0
2.069GluAsn: 2.069 ± 0.0
2.414GluPro: 2.414 ± 0.0
1.379GluGln: 1.379 ± 0.0
3.448GluArg: 3.448 ± 0.0
4.483GluSer: 4.483 ± 0.0
2.414GluThr: 2.414 ± 0.0
3.103GluVal: 3.103 ± 0.0
1.034GluTrp: 1.034 ± 0.0
3.103GluTyr: 3.103 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.103PheAla: 3.103 ± 0.0
0.345PheCys: 0.345 ± 0.0
3.103PheAsp: 3.103 ± 0.0
2.759PheGlu: 2.759 ± 0.0
1.034PhePhe: 1.034 ± 0.0
3.793PheGly: 3.793 ± 0.0
1.034PheHis: 1.034 ± 0.0
2.414PheIle: 2.414 ± 0.0
3.448PheLys: 3.448 ± 0.0
3.448PheLeu: 3.448 ± 0.0
1.034PheMet: 1.034 ± 0.0
1.724PheAsn: 1.724 ± 0.0
2.759PhePro: 2.759 ± 0.0
1.379PheGln: 1.379 ± 0.0
2.414PheArg: 2.414 ± 0.0
3.103PheSer: 3.103 ± 0.0
5.172PheThr: 5.172 ± 0.0
2.759PheVal: 2.759 ± 0.0
0.69PheTrp: 0.69 ± 0.0
1.379PheTyr: 1.379 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.103GlyAla: 3.103 ± 0.0
1.034GlyCys: 1.034 ± 0.0
3.448GlyAsp: 3.448 ± 0.0
2.414GlyGlu: 2.414 ± 0.0
3.448GlyPhe: 3.448 ± 0.0
2.759GlyGly: 2.759 ± 0.0
1.724GlyHis: 1.724 ± 0.0
5.172GlyIle: 5.172 ± 0.0
4.483GlyLys: 4.483 ± 0.0
3.793GlyLeu: 3.793 ± 0.0
2.069GlyMet: 2.069 ± 0.0
4.483GlyAsn: 4.483 ± 0.0
2.759GlyPro: 2.759 ± 0.0
1.724GlyGln: 1.724 ± 0.0
1.724GlyArg: 1.724 ± 0.0
4.483GlySer: 4.483 ± 0.0
3.448GlyThr: 3.448 ± 0.0
3.793GlyVal: 3.793 ± 0.0
0.69GlyTrp: 0.69 ± 0.0
1.379GlyTyr: 1.379 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.69HisAla: 0.69 ± 0.0
1.034HisCys: 1.034 ± 0.0
2.414HisAsp: 2.414 ± 0.0
1.379HisGlu: 1.379 ± 0.0
0.0HisPhe: 0.0 ± 0.0
2.069HisGly: 2.069 ± 0.0
0.69HisHis: 0.69 ± 0.0
3.103HisIle: 3.103 ± 0.0
1.724HisLys: 1.724 ± 0.0
1.724HisLeu: 1.724 ± 0.0
0.345HisMet: 0.345 ± 0.0
0.69HisAsn: 0.69 ± 0.0
1.724HisPro: 1.724 ± 0.0
0.69HisGln: 0.69 ± 0.0
0.345HisArg: 0.345 ± 0.0
1.034HisSer: 1.034 ± 0.0
0.69HisThr: 0.69 ± 0.0
2.069HisVal: 2.069 ± 0.0
0.345HisTrp: 0.345 ± 0.0
1.379HisTyr: 1.379 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
6.207IleAla: 6.207 ± 0.0
1.724IleCys: 1.724 ± 0.0
2.759IleAsp: 2.759 ± 0.0
4.483IleGlu: 4.483 ± 0.0
3.793IlePhe: 3.793 ± 0.0
5.517IleGly: 5.517 ± 0.0
1.379IleHis: 1.379 ± 0.0
5.172IleIle: 5.172 ± 0.0
4.828IleLys: 4.828 ± 0.0
4.138IleLeu: 4.138 ± 0.0
1.724IleMet: 1.724 ± 0.0
2.759IleAsn: 2.759 ± 0.0
4.828IlePro: 4.828 ± 0.0
2.069IleGln: 2.069 ± 0.0
3.103IleArg: 3.103 ± 0.0
4.138IleSer: 4.138 ± 0.0
4.138IleThr: 4.138 ± 0.0
2.759IleVal: 2.759 ± 0.0
0.69IleTrp: 0.69 ± 0.0
3.103IleTyr: 3.103 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.759LysAla: 2.759 ± 0.0
1.034LysCys: 1.034 ± 0.0
3.793LysAsp: 3.793 ± 0.0
5.517LysGlu: 5.517 ± 0.0
3.103LysPhe: 3.103 ± 0.0
2.069LysGly: 2.069 ± 0.0
2.414LysHis: 2.414 ± 0.0
3.103LysIle: 3.103 ± 0.0
4.138LysLys: 4.138 ± 0.0
4.138LysLeu: 4.138 ± 0.0
1.034LysMet: 1.034 ± 0.0
1.724LysAsn: 1.724 ± 0.0
1.724LysPro: 1.724 ± 0.0
1.724LysGln: 1.724 ± 0.0
2.759LysArg: 2.759 ± 0.0
6.552LysSer: 6.552 ± 0.0
3.103LysThr: 3.103 ± 0.0
3.793LysVal: 3.793 ± 0.0
1.034LysTrp: 1.034 ± 0.0
5.862LysTyr: 5.862 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.483LeuAla: 4.483 ± 0.0
1.724LeuCys: 1.724 ± 0.0
6.897LeuAsp: 6.897 ± 0.0
3.448LeuGlu: 3.448 ± 0.0
3.103LeuPhe: 3.103 ± 0.0
4.138LeuGly: 4.138 ± 0.0
1.724LeuHis: 1.724 ± 0.0
6.552LeuIle: 6.552 ± 0.0
6.207LeuLys: 6.207 ± 0.0
4.828LeuLeu: 4.828 ± 0.0
0.0LeuMet: 0.0 ± 0.0
4.138LeuAsn: 4.138 ± 0.0
3.448LeuPro: 3.448 ± 0.0
3.103LeuGln: 3.103 ± 0.0
4.138LeuArg: 4.138 ± 0.0
5.862LeuSer: 5.862 ± 0.0
4.138LeuThr: 4.138 ± 0.0
7.241LeuVal: 7.241 ± 0.0
0.345LeuTrp: 0.345 ± 0.0
3.448LeuTyr: 3.448 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.379MetAla: 1.379 ± 0.0
0.69MetCys: 0.69 ± 0.0
1.379MetAsp: 1.379 ± 0.0
3.448MetGlu: 3.448 ± 0.0
1.034MetPhe: 1.034 ± 0.0
1.034MetGly: 1.034 ± 0.0
1.034MetHis: 1.034 ± 0.0
2.069MetIle: 2.069 ± 0.0
1.724MetLys: 1.724 ± 0.0
1.034MetLeu: 1.034 ± 0.0
0.69MetMet: 0.69 ± 0.0
1.724MetAsn: 1.724 ± 0.0
0.69MetPro: 0.69 ± 0.0
0.69MetGln: 0.69 ± 0.0
1.379MetArg: 1.379 ± 0.0
1.379MetSer: 1.379 ± 0.0
0.69MetThr: 0.69 ± 0.0
1.034MetVal: 1.034 ± 0.0
0.69MetTrp: 0.69 ± 0.0
0.69MetTyr: 0.69 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.759AsnAla: 2.759 ± 0.0
1.034AsnCys: 1.034 ± 0.0
2.069AsnAsp: 2.069 ± 0.0
1.724AsnGlu: 1.724 ± 0.0
3.103AsnPhe: 3.103 ± 0.0
2.414AsnGly: 2.414 ± 0.0
1.034AsnHis: 1.034 ± 0.0
2.759AsnIle: 2.759 ± 0.0
3.448AsnLys: 3.448 ± 0.0
1.724AsnLeu: 1.724 ± 0.0
0.69AsnMet: 0.69 ± 0.0
2.414AsnAsn: 2.414 ± 0.0
5.862AsnPro: 5.862 ± 0.0
1.034AsnGln: 1.034 ± 0.0
3.448AsnArg: 3.448 ± 0.0
3.793AsnSer: 3.793 ± 0.0
2.759AsnThr: 2.759 ± 0.0
4.828AsnVal: 4.828 ± 0.0
0.69AsnTrp: 0.69 ± 0.0
2.414AsnTyr: 2.414 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.103ProAla: 3.103 ± 0.0
1.034ProCys: 1.034 ± 0.0
1.034ProAsp: 1.034 ± 0.0
4.828ProGlu: 4.828 ± 0.0
2.759ProPhe: 2.759 ± 0.0
3.103ProGly: 3.103 ± 0.0
1.034ProHis: 1.034 ± 0.0
2.759ProIle: 2.759 ± 0.0
1.724ProLys: 1.724 ± 0.0
5.172ProLeu: 5.172 ± 0.0
2.759ProMet: 2.759 ± 0.0
2.759ProAsn: 2.759 ± 0.0
3.103ProPro: 3.103 ± 0.0
2.069ProGln: 2.069 ± 0.0
2.069ProArg: 2.069 ± 0.0
6.207ProSer: 6.207 ± 0.0
1.724ProThr: 1.724 ± 0.0
1.724ProVal: 1.724 ± 0.0
0.345ProTrp: 0.345 ± 0.0
2.414ProTyr: 2.414 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.069GlnAla: 2.069 ± 0.0
0.69GlnCys: 0.69 ± 0.0
1.379GlnAsp: 1.379 ± 0.0
1.034GlnGlu: 1.034 ± 0.0
0.345GlnPhe: 0.345 ± 0.0
0.69GlnGly: 0.69 ± 0.0
1.034GlnHis: 1.034 ± 0.0
2.759GlnIle: 2.759 ± 0.0
2.759GlnLys: 2.759 ± 0.0
4.138GlnLeu: 4.138 ± 0.0
0.345GlnMet: 0.345 ± 0.0
0.69GlnAsn: 0.69 ± 0.0
2.759GlnPro: 2.759 ± 0.0
0.345GlnGln: 0.345 ± 0.0
1.724GlnArg: 1.724 ± 0.0
1.034GlnSer: 1.034 ± 0.0
1.034GlnThr: 1.034 ± 0.0
2.069GlnVal: 2.069 ± 0.0
1.034GlnTrp: 1.034 ± 0.0
1.379GlnTyr: 1.379 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.103ArgAla: 3.103 ± 0.0
1.034ArgCys: 1.034 ± 0.0
4.138ArgAsp: 4.138 ± 0.0
4.483ArgGlu: 4.483 ± 0.0
2.414ArgPhe: 2.414 ± 0.0
2.759ArgGly: 2.759 ± 0.0
0.345ArgHis: 0.345 ± 0.0
4.828ArgIle: 4.828 ± 0.0
2.759ArgLys: 2.759 ± 0.0
4.483ArgLeu: 4.483 ± 0.0
0.69ArgMet: 0.69 ± 0.0
2.069ArgAsn: 2.069 ± 0.0
3.103ArgPro: 3.103 ± 0.0
2.069ArgGln: 2.069 ± 0.0
4.138ArgArg: 4.138 ± 0.0
3.793ArgSer: 3.793 ± 0.0
2.069ArgThr: 2.069 ± 0.0
2.414ArgVal: 2.414 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
2.414ArgTyr: 2.414 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.103SerAla: 3.103 ± 0.0
1.724SerCys: 1.724 ± 0.0
4.483SerAsp: 4.483 ± 0.0
5.172SerGlu: 5.172 ± 0.0
3.448SerPhe: 3.448 ± 0.0
5.172SerGly: 5.172 ± 0.0
1.379SerHis: 1.379 ± 0.0
5.862SerIle: 5.862 ± 0.0
4.138SerLys: 4.138 ± 0.0
8.966SerLeu: 8.966 ± 0.0
3.103SerMet: 3.103 ± 0.0
6.207SerAsn: 6.207 ± 0.0
2.069SerPro: 2.069 ± 0.0
1.379SerGln: 1.379 ± 0.0
2.069SerArg: 2.069 ± 0.0
4.828SerSer: 4.828 ± 0.0
2.759SerThr: 2.759 ± 0.0
4.828SerVal: 4.828 ± 0.0
1.379SerTrp: 1.379 ± 0.0
3.103SerTyr: 3.103 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
4.138ThrAla: 4.138 ± 0.0
0.345ThrCys: 0.345 ± 0.0
2.759ThrAsp: 2.759 ± 0.0
4.138ThrGlu: 4.138 ± 0.0
2.759ThrPhe: 2.759 ± 0.0
3.448ThrGly: 3.448 ± 0.0
1.034ThrHis: 1.034 ± 0.0
2.069ThrIle: 2.069 ± 0.0
1.379ThrLys: 1.379 ± 0.0
3.103ThrLeu: 3.103 ± 0.0
0.69ThrMet: 0.69 ± 0.0
1.724ThrAsn: 1.724 ± 0.0
3.448ThrPro: 3.448 ± 0.0
1.034ThrGln: 1.034 ± 0.0
2.069ThrArg: 2.069 ± 0.0
5.517ThrSer: 5.517 ± 0.0
2.069ThrThr: 2.069 ± 0.0
3.103ThrVal: 3.103 ± 0.0
1.379ThrTrp: 1.379 ± 0.0
2.069ThrTyr: 2.069 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.483ValAla: 4.483 ± 0.0
1.379ValCys: 1.379 ± 0.0
3.103ValAsp: 3.103 ± 0.0
4.483ValGlu: 4.483 ± 0.0
3.448ValPhe: 3.448 ± 0.0
3.448ValGly: 3.448 ± 0.0
1.034ValHis: 1.034 ± 0.0
3.103ValIle: 3.103 ± 0.0
3.793ValLys: 3.793 ± 0.0
3.448ValLeu: 3.448 ± 0.0
0.69ValMet: 0.69 ± 0.0
4.138ValAsn: 4.138 ± 0.0
4.138ValPro: 4.138 ± 0.0
2.759ValGln: 2.759 ± 0.0
3.793ValArg: 3.793 ± 0.0
5.862ValSer: 5.862 ± 0.0
3.103ValThr: 3.103 ± 0.0
6.552ValVal: 6.552 ± 0.0
1.379ValTrp: 1.379 ± 0.0
2.069ValTyr: 2.069 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.69TrpAla: 0.69 ± 0.0
0.345TrpCys: 0.345 ± 0.0
0.345TrpAsp: 0.345 ± 0.0
0.345TrpGlu: 0.345 ± 0.0
0.69TrpPhe: 0.69 ± 0.0
0.69TrpGly: 0.69 ± 0.0
1.034TrpHis: 1.034 ± 0.0
1.724TrpIle: 1.724 ± 0.0
1.034TrpLys: 1.034 ± 0.0
2.069TrpLeu: 2.069 ± 0.0
0.0TrpMet: 0.0 ± 0.0
2.069TrpAsn: 2.069 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.345TrpGln: 0.345 ± 0.0
0.345TrpArg: 0.345 ± 0.0
1.034TrpSer: 1.034 ± 0.0
1.379TrpThr: 1.379 ± 0.0
1.034TrpVal: 1.034 ± 0.0
0.69TrpTrp: 0.69 ± 0.0
0.345TrpTyr: 0.345 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.759TyrAla: 2.759 ± 0.0
1.379TyrCys: 1.379 ± 0.0
2.069TyrAsp: 2.069 ± 0.0
2.414TyrGlu: 2.414 ± 0.0
1.034TyrPhe: 1.034 ± 0.0
3.793TyrGly: 3.793 ± 0.0
0.345TyrHis: 0.345 ± 0.0
2.069TyrIle: 2.069 ± 0.0
2.069TyrLys: 2.069 ± 0.0
2.414TyrLeu: 2.414 ± 0.0
2.069TyrMet: 2.069 ± 0.0
1.034TyrAsn: 1.034 ± 0.0
2.069TyrPro: 2.069 ± 0.0
2.414TyrGln: 2.414 ± 0.0
3.103TyrArg: 3.103 ± 0.0
2.069TyrSer: 2.069 ± 0.0
2.069TyrThr: 2.069 ± 0.0
4.828TyrVal: 4.828 ± 0.0
2.069TyrTrp: 2.069 ± 0.0
3.103TyrTyr: 3.103 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2901 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski