Torque teno sus virus 1b

Taxonomy: Viruses; Anelloviridae; Iotatorquevirus

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E0Y3X8|E0Y3X8_9VIRU ORF2 OS=Torque teno sus virus 1b OX=687387 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.51EE2 pKa = 4.92EE3 pKa = 3.49RR4 pKa = 11.84WLTVAYY10 pKa = 8.84CAHH13 pKa = 7.1GLFCDD18 pKa = 3.9CKK20 pKa = 10.75DD21 pKa = 3.68PKK23 pKa = 10.89KK24 pKa = 10.17HH25 pKa = 6.64LEE27 pKa = 3.92KK28 pKa = 10.88CLTDD32 pKa = 5.18AIADD36 pKa = 3.82AEE38 pKa = 4.42GDD40 pKa = 3.68RR41 pKa = 11.84QEE43 pKa = 5.44DD44 pKa = 4.1GGTGGGDD51 pKa = 2.92ATFDD55 pKa = 3.25IGIDD59 pKa = 3.51ALLAAAAQRR68 pKa = 3.68

Molecular weight: 7.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E0Y3X8|E0Y3X8_9VIRU ORF2 OS=Torque teno sus virus 1b OX=687387 GN=ORF2 PE=4 SV=1
MM1 pKa = 8.01PYY3 pKa = 9.82RR4 pKa = 11.84RR5 pKa = 11.84YY6 pKa = 9.5RR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84PTRR15 pKa = 11.84RR16 pKa = 11.84WRR18 pKa = 11.84HH19 pKa = 4.47RR20 pKa = 11.84RR21 pKa = 11.84WRR23 pKa = 11.84RR24 pKa = 11.84YY25 pKa = 7.81FRR27 pKa = 11.84YY28 pKa = 9.49RR29 pKa = 11.84YY30 pKa = 9.15RR31 pKa = 11.84RR32 pKa = 11.84APRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84TKK40 pKa = 8.79VRR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84KK47 pKa = 10.11APVIQWNPPSRR58 pKa = 11.84RR59 pKa = 11.84TCLIEE64 pKa = 4.59GFWPLSYY71 pKa = 10.62GHH73 pKa = 7.13WFRR76 pKa = 11.84TCLPFRR82 pKa = 11.84RR83 pKa = 11.84KK84 pKa = 10.05NGLIFTGGGCDD95 pKa = 2.95WTQWSLQNLYY105 pKa = 10.4HH106 pKa = 7.36EE107 pKa = 4.67KK108 pKa = 10.89LNWRR112 pKa = 11.84NIWTASNVGMEE123 pKa = 4.38FTRR126 pKa = 11.84FLRR129 pKa = 11.84GKK131 pKa = 9.95FYY133 pKa = 10.73FFRR136 pKa = 11.84HH137 pKa = 5.36PWRR140 pKa = 11.84NYY142 pKa = 8.91IVTWDD147 pKa = 3.48QDD149 pKa = 3.94IPCKK153 pKa = 9.77PLPYY157 pKa = 10.09QNLHH161 pKa = 6.55PLLMLLKK168 pKa = 9.36KK169 pKa = 8.04QHH171 pKa = 6.65KK172 pKa = 9.91LVLSQQNCNPNRR184 pKa = 11.84KK185 pKa = 8.66QKK187 pKa = 10.48PVTLKK192 pKa = 10.25FRR194 pKa = 11.84PPPKK198 pKa = 9.71LTSQWRR204 pKa = 11.84LSRR207 pKa = 11.84EE208 pKa = 3.95LAKK211 pKa = 10.31MPLIRR216 pKa = 11.84LGVSFIDD223 pKa = 4.12LTEE226 pKa = 4.07PWLEE230 pKa = 3.71GWGNAFYY237 pKa = 11.12SVLGYY242 pKa = 9.89EE243 pKa = 4.55AIKK246 pKa = 10.32EE247 pKa = 3.95QGHH250 pKa = 5.32WSNWAQVKK258 pKa = 8.7YY259 pKa = 10.38YY260 pKa = 9.75WIYY263 pKa = 9.93DD264 pKa = 3.69TGVGNAVYY272 pKa = 10.73VVMLKK277 pKa = 10.14QEE279 pKa = 3.97VDD281 pKa = 3.76DD282 pKa = 5.19NPGKK286 pKa = 9.45MASTFKK292 pKa = 8.49TTQGQHH298 pKa = 6.25PNAIDD303 pKa = 4.13HH304 pKa = 6.87IEE306 pKa = 4.66LINEE310 pKa = 4.42GWPYY314 pKa = 10.19WLYY317 pKa = 11.05FFGKK321 pKa = 9.84SEE323 pKa = 3.97QDD325 pKa = 3.06IKK327 pKa = 11.32KK328 pKa = 9.07EE329 pKa = 3.82AHH331 pKa = 5.24SQEE334 pKa = 3.81IARR337 pKa = 11.84EE338 pKa = 3.91YY339 pKa = 9.47ATNPKK344 pKa = 9.84SKK346 pKa = 9.86KK347 pKa = 9.88LKK349 pKa = 9.95IGIVGWASSNFTTPGSSQNTGGNTAAIQGGYY380 pKa = 7.85VAWAGGQGKK389 pKa = 9.92LNLGAGSIGNLYY401 pKa = 8.43QQGWPSNQNWPNTNRR416 pKa = 11.84DD417 pKa = 3.24EE418 pKa = 4.83TNFDD422 pKa = 2.67WGLRR426 pKa = 11.84SLCILRR432 pKa = 11.84DD433 pKa = 3.61NMQLGSQEE441 pKa = 5.12LDD443 pKa = 3.89DD444 pKa = 4.58EE445 pKa = 4.72CTMLSLFGPFVEE457 pKa = 4.54KK458 pKa = 10.79ANPIFATTDD467 pKa = 3.16PKK469 pKa = 11.11YY470 pKa = 10.66FKK472 pKa = 10.64PEE474 pKa = 3.89LKK476 pKa = 10.28DD477 pKa = 3.23YY478 pKa = 10.97NLIMKK483 pKa = 8.98YY484 pKa = 10.38AFKK487 pKa = 10.3FQWGGHH493 pKa = 3.76GTEE496 pKa = 4.41RR497 pKa = 11.84FKK499 pKa = 9.27TTIGDD504 pKa = 3.85PSTIPCPFEE513 pKa = 5.34PGDD516 pKa = 3.9RR517 pKa = 11.84FHH519 pKa = 9.18SGIQDD524 pKa = 3.36PSKK527 pKa = 10.94VQNTVLNPWDD537 pKa = 4.05YY538 pKa = 11.7DD539 pKa = 3.39CDD541 pKa = 4.87GIVRR545 pKa = 11.84KK546 pKa = 8.78DD547 pKa = 3.28TLKK550 pKa = 10.91RR551 pKa = 11.84LLEE554 pKa = 4.48LPTEE558 pKa = 4.31TEE560 pKa = 4.42EE561 pKa = 4.42EE562 pKa = 4.15EE563 pKa = 4.2KK564 pKa = 10.55AYY566 pKa = 9.87PLLGQKK572 pKa = 7.42TEE574 pKa = 4.39KK575 pKa = 10.65EE576 pKa = 4.16PLSDD580 pKa = 3.53SDD582 pKa = 3.95EE583 pKa = 4.33EE584 pKa = 4.55SVISSTSSGSSQEE597 pKa = 4.44EE598 pKa = 3.84EE599 pKa = 4.09TQRR602 pKa = 11.84RR603 pKa = 11.84KK604 pKa = 8.99HH605 pKa = 5.93HH606 pKa = 6.35KK607 pKa = 7.96PSKK610 pKa = 9.9RR611 pKa = 11.84RR612 pKa = 11.84LLKK615 pKa = 10.16HH616 pKa = 5.57LQRR619 pKa = 11.84VVKK622 pKa = 10.41RR623 pKa = 11.84MKK625 pKa = 9.97TLL627 pKa = 3.31

Molecular weight: 73.93 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

695

68

627

347.5

40.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.892 ± 4.87

1.871 ± 1.731

4.892 ± 3.601

5.755 ± 0.689

4.173 ± 0.531

7.626 ± 1.786

2.446 ± 0.214

4.317 ± 0.041

7.194 ± 0.566

8.489 ± 0.144

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.583 ± 0.048

4.748 ± 2.049

6.043 ± 1.973

4.892 ± 0.842

8.633 ± 1.822

5.18 ± 2.236

6.043 ± 0.069

3.453 ± 0.856

3.885 ± 1.042

3.885 ± 1.042
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski