Furfurilactobacillus rossiae DSM 15814

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Furfurilactobacillus; Furfurilactobacillus rossiae

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2635 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R1RDU9|A0A0R1RDU9_9LACO Maltose O-acetyltransferase OS=Furfurilactobacillus rossiae DSM 15814 OX=1114972 GN=FD35_GL002501 PE=3 SV=1
MM1 pKa = 7.64ASDD4 pKa = 3.73AHH6 pKa = 5.35QVPVSFNDD14 pKa = 3.5TTLTDD19 pKa = 3.97LKK21 pKa = 10.6AYY23 pKa = 10.73CEE25 pKa = 4.27FFSVDD30 pKa = 3.13QDD32 pKa = 3.61QLINTVLCHH41 pKa = 5.89FLEE44 pKa = 4.38NHH46 pKa = 6.43EE47 pKa = 4.39SADD50 pKa = 4.19LNKK53 pKa = 10.17LAQGYY58 pKa = 8.86LAMGQLNEE66 pKa = 4.49EE67 pKa = 4.26IADD70 pKa = 3.68EE71 pKa = 4.72FSASEE76 pKa = 4.27AEE78 pKa = 4.83ASRR81 pKa = 11.84LDD83 pKa = 3.47QQ84 pKa = 4.64

Molecular weight: 9.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0R1RL82|A0A0R1RL82_9LACO Glutathione reductase OS=Furfurilactobacillus rossiae DSM 15814 OX=1114972 GN=FD35_GL002479 PE=3 SV=1
MM1 pKa = 7.35SQTHH5 pKa = 4.9WQRR8 pKa = 11.84VRR10 pKa = 11.84NLVAIICFIIFLILLAGVVTDD31 pKa = 5.56ASWLHH36 pKa = 5.83QLDD39 pKa = 3.32QFGTHH44 pKa = 5.88IVRR47 pKa = 11.84HH48 pKa = 5.68PVTEE52 pKa = 3.69EE53 pKa = 3.69RR54 pKa = 11.84TWFFRR59 pKa = 11.84NITRR63 pKa = 11.84LGNVKK68 pKa = 8.72FTMIVMVVFSLGLWWRR84 pKa = 11.84KK85 pKa = 9.39KK86 pKa = 8.67YY87 pKa = 10.45QGAVFFFVNVGVFALAVNTILKK109 pKa = 10.4SLVEE113 pKa = 4.2RR114 pKa = 11.84PRR116 pKa = 11.84PIITHH121 pKa = 6.34LVAAGGFSFPSGHH134 pKa = 6.09SMNVTLMYY142 pKa = 10.58GSLIILCNLYY152 pKa = 10.42VDD154 pKa = 4.48RR155 pKa = 11.84LHH157 pKa = 7.2LRR159 pKa = 11.84AAFNTLLTLLIITICLSRR177 pKa = 11.84VYY179 pKa = 10.52LGVHH183 pKa = 6.31FPSDD187 pKa = 3.74VLAGSALAWSEE198 pKa = 4.02LLMSRR203 pKa = 11.84YY204 pKa = 10.01LFFKK208 pKa = 7.76TTSIHH213 pKa = 6.64AKK215 pKa = 9.69RR216 pKa = 3.91

Molecular weight: 24.67 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2635

0

2635

804405

39

3552

305.3

33.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.697 ± 0.1

0.407 ± 0.01

6.106 ± 0.052

4.904 ± 0.053

4.224 ± 0.048

6.769 ± 0.042

2.403 ± 0.032

6.471 ± 0.057

5.399 ± 0.046

9.564 ± 0.08

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.722 ± 0.029

4.816 ± 0.045

3.681 ± 0.027

4.716 ± 0.038

4.247 ± 0.054

6.259 ± 0.078

6.842 ± 0.098

7.404 ± 0.041

1.132 ± 0.02

3.237 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski