Papaya meleira virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; unclassified Totiviridae

Average proteome isoelectric point is 8.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0P0QL14|A0A0P0QL14_9VIRU RNA-directed RNA polymerase OS=Papaya meleira virus OX=1497848 GN=pol PE=3 SV=1
MM1 pKa = 7.5AASQGRR7 pKa = 11.84YY8 pKa = 9.13CEE10 pKa = 3.99EE11 pKa = 3.63RR12 pKa = 11.84FNLFKK17 pKa = 10.66EE18 pKa = 4.32YY19 pKa = 10.51TSLNEE24 pKa = 4.83FPDD27 pKa = 3.81LNLKK31 pKa = 10.14VEE33 pKa = 4.26EE34 pKa = 4.25TFKK37 pKa = 11.44NFVFKK42 pKa = 10.9LSEE45 pKa = 4.13IEE47 pKa = 4.2GLPLLSHH54 pKa = 7.0CNLLIDD60 pKa = 4.87IKK62 pKa = 11.19GFLDD66 pKa = 3.87KK67 pKa = 10.96FPLIHH72 pKa = 6.88YY73 pKa = 8.03DD74 pKa = 3.6YY75 pKa = 11.2NNSNFRR81 pKa = 11.84NIVTWIFIEE90 pKa = 3.97PLPRR94 pKa = 11.84EE95 pKa = 4.18IYY97 pKa = 10.27SYY99 pKa = 11.55LPVKK103 pKa = 10.39LFNTINIFILKK114 pKa = 9.84DD115 pKa = 3.57LEE117 pKa = 4.6KK118 pKa = 10.23EE119 pKa = 3.94LPKK122 pKa = 10.57INFISNLILNKK133 pKa = 10.4NNLEE137 pKa = 3.78ITNNLFFKK145 pKa = 10.73PLGRR149 pKa = 11.84LGGKK153 pKa = 6.24THH155 pKa = 7.39LLIGDD160 pKa = 4.21FLKK163 pKa = 11.05LFNFSFSDD171 pKa = 3.12IGRR174 pKa = 11.84EE175 pKa = 3.52EE176 pKa = 4.49DD177 pKa = 3.07KK178 pKa = 11.15GKK180 pKa = 10.72KK181 pKa = 8.79VVHH184 pKa = 6.02ILINKK189 pKa = 8.38NRR191 pKa = 11.84VNNNIGIYY199 pKa = 10.45DD200 pKa = 4.07FNNLIKK206 pKa = 10.74LNKK209 pKa = 9.03DD210 pKa = 3.53TILSNDD216 pKa = 3.51IIYY219 pKa = 9.22TLISVLLYY227 pKa = 10.26QLEE230 pKa = 4.48LGCEE234 pKa = 4.13EE235 pKa = 4.35SWNSLNVAGLLISPITSPLGFICTLFFISSNITKK269 pKa = 8.93LTILEE274 pKa = 3.99ASKK277 pKa = 10.34ICKK280 pKa = 9.85KK281 pKa = 10.16FQNTVRR287 pKa = 11.84IGGRR291 pKa = 11.84LPIFNIPITDD301 pKa = 3.67DD302 pKa = 3.07NKK304 pKa = 10.87YY305 pKa = 10.7FLDD308 pKa = 4.17GQKK311 pKa = 10.86GILSIEE317 pKa = 4.86GIRR320 pKa = 11.84MLYY323 pKa = 10.63GIDD326 pKa = 3.64SLLGPSEE333 pKa = 4.4FYY335 pKa = 10.67KK336 pKa = 10.65YY337 pKa = 10.9DD338 pKa = 4.9PISEE342 pKa = 4.36IITRR346 pKa = 11.84QVHH349 pKa = 6.1PNLEE353 pKa = 3.84LSLYY357 pKa = 10.5KK358 pKa = 10.7GGSRR362 pKa = 11.84SNKK365 pKa = 9.39AYY367 pKa = 10.49SSTIEE372 pKa = 3.9AVNKK376 pKa = 9.7RR377 pKa = 11.84EE378 pKa = 3.94EE379 pKa = 4.38IIRR382 pKa = 11.84QDD384 pKa = 3.26MYY386 pKa = 11.29NSLFFSVVKK395 pKa = 10.47KK396 pKa = 8.9LHH398 pKa = 6.52RR399 pKa = 11.84PFKK402 pKa = 10.25TFRR405 pKa = 11.84EE406 pKa = 4.09WFNIKK411 pKa = 10.21FSWSASGGCPGAKK424 pKa = 9.85VFWSEE429 pKa = 4.1SEE431 pKa = 4.03KK432 pKa = 10.68IRR434 pKa = 11.84VNKK437 pKa = 10.19RR438 pKa = 11.84GALLNVKK445 pKa = 9.83VDD447 pKa = 4.15DD448 pKa = 3.95VVKK451 pKa = 10.83AINEE455 pKa = 4.41TYY457 pKa = 10.56NNPVHH462 pKa = 6.08YY463 pKa = 10.45SKK465 pKa = 11.04AARR468 pKa = 11.84KK469 pKa = 8.91YY470 pKa = 8.46EE471 pKa = 3.9KK472 pKa = 10.67GKK474 pKa = 10.12NRR476 pKa = 11.84VIWNTTLLMYY486 pKa = 10.3LAQSYY491 pKa = 10.61LLYY494 pKa = 9.98TFEE497 pKa = 6.42SILDD501 pKa = 3.93PLQHH505 pKa = 6.92DD506 pKa = 4.68FSFEE510 pKa = 4.08LKK512 pKa = 10.5QISSWNSSTANADD525 pKa = 2.91MRR527 pKa = 11.84FISNQEE533 pKa = 3.75RR534 pKa = 11.84LRR536 pKa = 11.84SLKK539 pKa = 10.8DD540 pKa = 3.19NSGLMFDD547 pKa = 4.57YY548 pKa = 11.23SDD550 pKa = 4.25FNINHH555 pKa = 6.69SIVVQNKK562 pKa = 9.75LYY564 pKa = 10.86DD565 pKa = 3.56VLSQVLFNKK574 pKa = 9.69MKK576 pKa = 10.6VNQEE580 pKa = 3.72NYY582 pKa = 9.79FQVLKK587 pKa = 10.31DD588 pKa = 3.5IKK590 pKa = 10.39WITEE594 pKa = 3.93YY595 pKa = 10.63ILRR598 pKa = 11.84AKK600 pKa = 8.99TFSVLDD606 pKa = 3.73AGVTDD611 pKa = 4.26NYY613 pKa = 10.2VSQVMRR619 pKa = 11.84SLEE622 pKa = 4.0SGEE625 pKa = 4.49RR626 pKa = 11.84GTSFINTFLSNCYY639 pKa = 9.5IRR641 pKa = 11.84NLNTNSRR648 pKa = 11.84SLFGRR653 pKa = 11.84QLLINNLWLQGDD665 pKa = 4.34DD666 pKa = 3.49VFAMTKK672 pKa = 10.1NLEE675 pKa = 4.57DD676 pKa = 3.49GCLAVNLFNCLGYY689 pKa = 10.63AGQPSKK695 pKa = 10.84IGLSLYY701 pKa = 11.07NNGEE705 pKa = 4.31FLRR708 pKa = 11.84LSYY711 pKa = 10.91DD712 pKa = 3.48PSCEE716 pKa = 3.97IIGGYY721 pKa = 8.69PIRR724 pKa = 11.84STSGLISGEE733 pKa = 3.94FFKK736 pKa = 11.06EE737 pKa = 4.1SIYY740 pKa = 11.28DD741 pKa = 3.59PDD743 pKa = 3.79TRR745 pKa = 11.84AGCYY749 pKa = 8.85LSSVIRR755 pKa = 11.84CNVRR759 pKa = 11.84GAIIPNNLIYY769 pKa = 10.28ILCQRR774 pKa = 11.84NCRR777 pKa = 11.84LIYY780 pKa = 8.85TKK782 pKa = 10.42PNSKK786 pKa = 10.3EE787 pKa = 4.01KK788 pKa = 10.36IVMIGDD794 pKa = 3.65PVLALIPSILGGFGINSILDD814 pKa = 3.2IGMKK818 pKa = 9.84HH819 pKa = 5.17QVPGTDD825 pKa = 2.82QLLNRR830 pKa = 11.84LQLSPKK836 pKa = 8.72MISGGWFSSKK846 pKa = 9.87FKK848 pKa = 10.83NLNPPKK854 pKa = 10.17DD855 pKa = 3.7SLPIGEE861 pKa = 5.07LFWIRR866 pKa = 11.84RR867 pKa = 11.84VSNNSNNNFNSYY879 pKa = 10.31YY880 pKa = 10.6VINTTKK886 pKa = 10.56SNPILRR892 pKa = 11.84FDD894 pKa = 5.2NIPDD898 pKa = 3.4ILGDD902 pKa = 3.5KK903 pKa = 10.27SIPDD907 pKa = 3.69FLSAYY912 pKa = 6.97TICNKK917 pKa = 10.35SLTKK921 pKa = 10.47EE922 pKa = 3.47ITQNIVKK929 pKa = 9.87SSVMGALPLDD939 pKa = 4.38LLSKK943 pKa = 10.76SLTKK947 pKa = 10.79YY948 pKa = 11.0GEE950 pKa = 4.19DD951 pKa = 3.24QLEE954 pKa = 4.03YY955 pKa = 10.17RR956 pKa = 11.84SKK958 pKa = 11.54CNVHH962 pKa = 4.24WVKK965 pKa = 9.72YY966 pKa = 7.49TSNFGSLNIKK976 pKa = 10.32LSFISHH982 pKa = 6.69YY983 pKa = 9.76ISNFIKK989 pKa = 10.49FLISDD994 pKa = 4.65EE995 pKa = 4.46IKK997 pKa = 9.49TSHH1000 pKa = 7.15KK1001 pKa = 10.17IDD1003 pKa = 2.97ISVNLNYY1010 pKa = 10.89GILPTLFIEE1019 pKa = 4.83YY1020 pKa = 10.32GFSLQEE1026 pKa = 3.71NFEE1029 pKa = 4.19RR1030 pKa = 11.84VIDD1033 pKa = 3.99EE1034 pKa = 4.89LNTKK1038 pKa = 9.68EE1039 pKa = 4.25LLEE1042 pKa = 5.1LIASKK1047 pKa = 7.55QTKK1050 pKa = 9.48KK1051 pKa = 10.86FSITSFFKK1059 pKa = 11.05NILILNKK1066 pKa = 10.29YY1067 pKa = 6.55NTKK1070 pKa = 10.68LYY1072 pKa = 10.63LKK1074 pKa = 8.9WIKK1077 pKa = 10.67GKK1079 pKa = 10.03ILLFPPVFSLIDD1091 pKa = 3.5SDD1093 pKa = 5.78IINIWRR1099 pKa = 11.84GWSLFSVEE1107 pKa = 5.05KK1108 pKa = 10.35MILHH1112 pKa = 6.1GVNLRR1117 pKa = 11.84EE1118 pKa = 4.5DD1119 pKa = 4.99DD1120 pKa = 3.36IPYY1123 pKa = 10.16IILEE1127 pKa = 4.27LEE1129 pKa = 4.16LLIEE1133 pKa = 4.29NYY1135 pKa = 9.98IKK1137 pKa = 10.82DD1138 pKa = 3.73SLEE1141 pKa = 3.91SLNKK1145 pKa = 9.36INKK1148 pKa = 8.62FYY1150 pKa = 11.56SMQTKK1155 pKa = 10.07AA1156 pKa = 4.14

Molecular weight: 132.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0P0QKV0|A0A0P0QKV0_9VIRU Putative structural protein OS=Papaya meleira virus OX=1497848 GN=gag PE=4 SV=1
MM1 pKa = 7.41VEE3 pKa = 4.51RR4 pKa = 11.84LTGMTNGFCHH14 pKa = 6.89RR15 pKa = 11.84LNSPALNRR23 pKa = 11.84GRR25 pKa = 11.84PILLSNCYY33 pKa = 10.09LPLSNFSSNRR43 pKa = 11.84SKK45 pKa = 11.13DD46 pKa = 2.81IGRR49 pKa = 11.84ATRR52 pKa = 11.84LAFEE56 pKa = 5.12LPDD59 pKa = 3.86LLSPSFLISLTLHH72 pKa = 6.37FEE74 pKa = 3.67AHH76 pKa = 6.94FISFVYY82 pKa = 10.15II83 pKa = 3.73

Molecular weight: 9.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

2835

83

1596

945.0

107.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.633 ± 0.8

1.199 ± 0.317

4.656 ± 0.541

5.15 ± 0.368

5.115 ± 1.073

5.15 ± 0.144

2.046 ± 0.597

8.536 ± 1.207

6.772 ± 1.414

10.265 ± 2.09

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.623 ± 0.258

8.289 ± 0.517

5.256 ± 1.069

3.069 ± 0.882

4.656 ± 0.997

8.924 ± 0.759

4.974 ± 0.544

5.397 ± 0.994

1.199 ± 0.287

4.092 ± 0.414
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski