Glutamicibacter creatinolyticus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales;

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2880 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5B7WTE2|A0A5B7WTE2_9MICC ABC transporter ATP-binding protein OS=Glutamicibacter creatinolyticus OX=162496 GN=GcLGCM259_0731 PE=4 SV=1
MM1 pKa = 7.43SVDD4 pKa = 3.49PNYY7 pKa = 11.07ALQVFIARR15 pKa = 11.84LEE17 pKa = 3.94NHH19 pKa = 6.84LEE21 pKa = 4.22VISTSRR27 pKa = 11.84GATDD31 pKa = 3.36ATVDD35 pKa = 3.39AAFGALADD43 pKa = 3.98AFEE46 pKa = 5.79AYY48 pKa = 10.4DD49 pKa = 3.54DD50 pKa = 4.19ALYY53 pKa = 11.01DD54 pKa = 3.71KK55 pKa = 10.98YY56 pKa = 11.52GEE58 pKa = 4.58LLPFTIPNDD67 pKa = 3.43EE68 pKa = 4.2SS69 pKa = 3.45

Molecular weight: 7.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5B7WVK7|A0A5B7WVK7_9MICC Sugar phosphate isomerase OS=Glutamicibacter creatinolyticus OX=162496 GN=GcLGCM259_2218 PE=4 SV=1
MM1 pKa = 7.28GSVVKK6 pKa = 10.44KK7 pKa = 9.48RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.32RR11 pKa = 11.84MSKK14 pKa = 9.76KK15 pKa = 9.54KK16 pKa = 9.79HH17 pKa = 5.67RR18 pKa = 11.84KK19 pKa = 8.31LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2880

0

2880

940657

32

1689

326.6

35.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.254 ± 0.06

0.652 ± 0.013

5.295 ± 0.044

6.049 ± 0.05

3.193 ± 0.03

8.524 ± 0.038

2.275 ± 0.022

4.616 ± 0.034

2.883 ± 0.039

10.675 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.18 ± 0.021

2.59 ± 0.023

5.134 ± 0.032

4.103 ± 0.033

6.636 ± 0.045

5.841 ± 0.032

5.61 ± 0.027

7.953 ± 0.033

1.394 ± 0.019

2.144 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski