Tortoise microvirus 55

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7G9|A0A4P8W7G9_9VIRU Uncharacterized protein OS=Tortoise microvirus 55 OX=2583160 PE=4 SV=1
MM1 pKa = 7.5KK2 pKa = 10.7NNVYY6 pKa = 8.78TLYY9 pKa = 9.29NTLSSRR15 pKa = 11.84YY16 pKa = 8.69GEE18 pKa = 4.25VMSFPSDD25 pKa = 2.84AFAVQRR31 pKa = 11.84IRR33 pKa = 11.84EE34 pKa = 4.12AMKK37 pKa = 10.26PEE39 pKa = 3.71MLAEE43 pKa = 4.27IEE45 pKa = 4.2LCNVGFIDD53 pKa = 3.77IDD55 pKa = 3.61TGIVEE60 pKa = 4.03AHH62 pKa = 5.87APVRR66 pKa = 11.84ISLTSPEE73 pKa = 4.41SPVPIDD79 pKa = 3.71NLEE82 pKa = 3.95KK83 pKa = 10.87

Molecular weight: 9.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W770|A0A4P8W770_9VIRU Uncharacterized protein OS=Tortoise microvirus 55 OX=2583160 PE=4 SV=1
MM1 pKa = 7.51ISSISLQLLIVTRR14 pKa = 11.84WRR16 pKa = 11.84MSDD19 pKa = 3.26MSCSNPLTINVKK31 pKa = 9.67GRR33 pKa = 11.84AVSVPCRR40 pKa = 11.84YY41 pKa = 10.15CMSCRR46 pKa = 11.84TEE48 pKa = 4.02YY49 pKa = 10.73QSALLFGAKK58 pKa = 9.68HH59 pKa = 5.83EE60 pKa = 5.09LFDD63 pKa = 4.85CYY65 pKa = 10.42RR66 pKa = 11.84AGLGASFVTLTYY78 pKa = 10.87SDD80 pKa = 3.29NCLPEE85 pKa = 4.76NGSLRR90 pKa = 11.84KK91 pKa = 9.53KK92 pKa = 10.45DD93 pKa = 3.61VQNLLKK99 pKa = 10.51NVRR102 pKa = 11.84IQAKK106 pKa = 9.67RR107 pKa = 11.84KK108 pKa = 7.62TNLPPFKK115 pKa = 10.65YY116 pKa = 10.15IMCGEE121 pKa = 4.19YY122 pKa = 10.25GDD124 pKa = 4.21KK125 pKa = 10.43FGRR128 pKa = 11.84PHH130 pKa = 4.73YY131 pKa = 9.98HH132 pKa = 5.82IVFIGLSDD140 pKa = 3.74VLVHH144 pKa = 6.66NFVKK148 pKa = 10.37PLWKK152 pKa = 10.38FGLIDD157 pKa = 3.29IGVLRR162 pKa = 11.84EE163 pKa = 3.78GGLRR167 pKa = 11.84YY168 pKa = 9.55ALKK171 pKa = 10.43YY172 pKa = 7.66CTKK175 pKa = 10.26AARR178 pKa = 11.84GKK180 pKa = 10.15KK181 pKa = 10.14AEE183 pKa = 4.18EE184 pKa = 4.68LYY186 pKa = 11.0DD187 pKa = 3.64NQSIEE192 pKa = 4.29RR193 pKa = 11.84PFICHH198 pKa = 5.72SRR200 pKa = 11.84GIGKK204 pKa = 8.54NWFMKK209 pKa = 10.65NADD212 pKa = 4.98DD213 pKa = 5.48IIAHH217 pKa = 6.03NFTYY221 pKa = 10.71LEE223 pKa = 3.99NGIRR227 pKa = 11.84KK228 pKa = 8.03PVPAYY233 pKa = 9.93FRR235 pKa = 11.84RR236 pKa = 11.84QYY238 pKa = 11.51DD239 pKa = 3.23AFKK242 pKa = 10.04TFDD245 pKa = 3.19VSEE248 pKa = 4.42SIKK251 pKa = 10.67YY252 pKa = 10.17LSEE255 pKa = 3.53EE256 pKa = 4.2ARR258 pKa = 11.84LHH260 pKa = 6.91GYY262 pKa = 10.58DD263 pKa = 5.19NYY265 pKa = 11.19RR266 pKa = 11.84DD267 pKa = 3.24WSKK270 pKa = 11.22QKK272 pKa = 9.69TYY274 pKa = 7.88QTEE277 pKa = 4.25KK278 pKa = 10.76NLTAAARR285 pKa = 11.84ASGIPVDD292 pKa = 4.72DD293 pKa = 3.79SSLRR297 pKa = 11.84LQSGFTANDD306 pKa = 3.06YY307 pKa = 10.93RR308 pKa = 11.84PLVNTLLAPRR318 pKa = 11.84RR319 pKa = 11.84EE320 pKa = 3.94ATTNFKK326 pKa = 10.31EE327 pKa = 4.17

Molecular weight: 37.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1791

76

571

223.9

25.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.203 ± 1.202

1.284 ± 0.518

6.253 ± 0.417

4.858 ± 0.657

4.802 ± 0.641

5.36 ± 0.717

1.563 ± 0.184

5.416 ± 0.791

4.69 ± 1.019

9.436 ± 1.006

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.127 ± 0.391

5.918 ± 0.897

4.634 ± 0.608

3.573 ± 1.075

5.695 ± 0.398

9.38 ± 0.741

6.477 ± 0.48

5.025 ± 0.515

0.838 ± 0.22

4.467 ± 0.654
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski