Klebsiella phage NL_ZS_2

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Przondovirus; unclassified Przondovirus

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 49 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A7G9UTH3|A0A7G9UTH3_9CAUD Uncharacterized protein OS=Klebsiella phage NL_ZS_2 OX=2769331 PE=4 SV=1
MM1 pKa = 7.37EE2 pKa = 5.49RR3 pKa = 11.84NANAYY8 pKa = 10.1YY9 pKa = 10.68DD10 pKa = 4.19LLAATVEE17 pKa = 4.25LFNEE21 pKa = 5.42RR22 pKa = 11.84IQQDD26 pKa = 4.36EE27 pKa = 4.43LTEE30 pKa = 4.32DD31 pKa = 4.55ADD33 pKa = 3.65WSDD36 pKa = 3.57ALHH39 pKa = 6.1EE40 pKa = 4.49VVDD43 pKa = 4.59GQVPHH48 pKa = 6.66YY49 pKa = 9.14YY50 pKa = 10.31SEE52 pKa = 4.24IFTVMAADD60 pKa = 5.45GIDD63 pKa = 3.77HH64 pKa = 6.79EE65 pKa = 5.26FDD67 pKa = 4.04DD68 pKa = 5.49SGLIPDD74 pKa = 4.27TKK76 pKa = 10.52DD77 pKa = 3.0VSRR80 pKa = 11.84ICQARR85 pKa = 11.84IYY87 pKa = 9.16EE88 pKa = 4.1ALYY91 pKa = 10.87NDD93 pKa = 3.61VSNDD97 pKa = 3.09SGIIWWEE104 pKa = 3.81EE105 pKa = 3.75PEE107 pKa = 5.89DD108 pKa = 4.06EE109 pKa = 6.18DD110 pKa = 5.71EE111 pKa = 4.61EE112 pKa = 5.45CSDD115 pKa = 4.78DD116 pKa = 3.91

Molecular weight: 13.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A7G9UTD2|A0A7G9UTD2_9CAUD Nucleotide kinase OS=Klebsiella phage NL_ZS_2 OX=2769331 PE=4 SV=1
MM1 pKa = 7.88RR2 pKa = 11.84LHH4 pKa = 6.7FNKK7 pKa = 10.46SNGIFSVRR15 pKa = 11.84RR16 pKa = 11.84EE17 pKa = 4.04DD18 pKa = 3.55RR19 pKa = 11.84STVAASEE26 pKa = 4.13RR27 pKa = 11.84HH28 pKa = 4.99GKK30 pKa = 8.95IPRR33 pKa = 11.84IGDD36 pKa = 3.66TFEE39 pKa = 4.6LAPSVHH45 pKa = 6.56ILVTRR50 pKa = 11.84GLYY53 pKa = 9.93EE54 pKa = 4.12LAQTKK59 pKa = 9.86SRR61 pKa = 11.84PFVPVVVTKK70 pKa = 9.98WPRR73 pKa = 11.84LRR75 pKa = 11.84LFWEE79 pKa = 4.85RR80 pKa = 11.84IKK82 pKa = 11.06EE83 pKa = 4.25VVNDD87 pKa = 3.83

Molecular weight: 10.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

49

0

49

12401

36

1321

253.1

28.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.894 ± 0.531

0.911 ± 0.16

6.411 ± 0.201

6.943 ± 0.533

3.701 ± 0.17

7.975 ± 0.384

1.951 ± 0.198

4.83 ± 0.135

6.709 ± 0.376

8.193 ± 0.339

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.589 ± 0.158

4.29 ± 0.245

3.782 ± 0.157

4.056 ± 0.317

5.379 ± 0.201

5.975 ± 0.364

5.588 ± 0.333

6.83 ± 0.366

1.492 ± 0.178

3.5 ± 0.198
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski