BtMf-AlphaCoV/AH2011
Average proteome isoelectric point is 7.23
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A0U1WJT6|A0A0U1WJT6_9ALPC Envelope small membrane protein OS=BtMf-AlphaCoV/AH2011 OX=1503278 GN=E PE=3 SV=1
MM1 pKa = 7.56 FLILCIALCINFVSSNIGCNSNGNLGMYY29 pKa = 9.8 RR30 pKa = 11.84 LKK32 pKa = 10.88 LGLPSDD38 pKa = 3.64 VTNAYY43 pKa = 10.11 VSGYY47 pKa = 10.12 LPSPNAWNCTINSPGTANITFNAKK71 pKa = 9.86 AVFISYY77 pKa = 9.44 YY78 pKa = 9.83 KK79 pKa = 10.21 NGRR82 pKa = 11.84 EE83 pKa = 3.98 VAVGVGNSKK92 pKa = 11.2 SNDD95 pKa = 3.45 SIGIYY100 pKa = 10.17 FNHH103 pKa = 6.91 HH104 pKa = 6.3 NGNKK108 pKa = 8.3 KK109 pKa = 9.15 TILRR113 pKa = 11.84 VCRR116 pKa = 11.84 WRR118 pKa = 11.84 KK119 pKa = 9.29 YY120 pKa = 11.42 AMPTYY125 pKa = 10.67 NPTITTNGEE134 pKa = 3.49 DD135 pKa = 4.31 CYY137 pKa = 11.4 INTNLKK143 pKa = 10.46 LDD145 pKa = 4.19 FVDD148 pKa = 3.85 QANHH152 pKa = 6.31 SDD154 pKa = 3.58 VFGLSWSGDD163 pKa = 3.15 RR164 pKa = 11.84 LVIYY168 pKa = 10.53 LPDD171 pKa = 3.86 RR172 pKa = 11.84 VTSYY176 pKa = 10.22 YY177 pKa = 10.72 VPGIGEE183 pKa = 4.46 LDD185 pKa = 3.52 VVSFRR190 pKa = 11.84 CVLKK194 pKa = 8.58 EE195 pKa = 4.05 TCAHH199 pKa = 5.26 QVITKK204 pKa = 9.52 PITAIVNTTSDD215 pKa = 3.8 GFISGYY221 pKa = 7.72 SVCDD225 pKa = 3.37 EE226 pKa = 4.17 CDD228 pKa = 3.25 GFPKK232 pKa = 10.64 YY233 pKa = 10.7 VFAATEE239 pKa = 4.27 GGAIPPNFQFDD250 pKa = 2.88 NWFYY254 pKa = 10.18 LTNSSTPISGMFTSVQPFNLSCVWPIPVLTSNSLPVHH291 pKa = 6.55 FNMSLNKK298 pKa = 9.85 GANCNGYY305 pKa = 10.81 SNLDD309 pKa = 3.5 VGLVDD314 pKa = 5.3 AMRR317 pKa = 11.84 FSLNFTDD324 pKa = 3.59 NQIIRR329 pKa = 11.84 TGVISVKK336 pKa = 10.16 TGTNVYY342 pKa = 10.38 NFSCTNSSVFGDD354 pKa = 3.34 ISVIPFGDD362 pKa = 3.57 VEE364 pKa = 4.2 QTHH367 pKa = 6.22 YY368 pKa = 11.34 CFINYY373 pKa = 7.01 FTNISTGEE381 pKa = 3.95 NASQFVGILPPQVKK395 pKa = 9.71 EE396 pKa = 3.69 FVIMRR401 pKa = 11.84 NGDD404 pKa = 3.34 FHH406 pKa = 8.25 LNGYY410 pKa = 10.11 RR411 pKa = 11.84 IFSVDD416 pKa = 3.08 TVEE419 pKa = 5.22 SVIFNISTRR428 pKa = 11.84 DD429 pKa = 3.45 GRR431 pKa = 11.84 DD432 pKa = 2.95 FWTVAFANNAEE443 pKa = 4.17 VLTEE447 pKa = 4.01 INATSIQNLLYY458 pKa = 10.82 CNNPVNSIKK467 pKa = 10.55 CQQLRR472 pKa = 11.84 FNLDD476 pKa = 2.92 NGFYY480 pKa = 10.78 SHH482 pKa = 6.97 TFDD485 pKa = 5.15 SADD488 pKa = 3.42 NLPRR492 pKa = 11.84 TIVRR496 pKa = 11.84 LPKK499 pKa = 10.35 YY500 pKa = 8.48 VTHH503 pKa = 6.86 SYY505 pKa = 11.09 INVTVGVNFEE515 pKa = 3.98 NRR517 pKa = 11.84 TLTNYY522 pKa = 10.51 LVDD525 pKa = 4.43 FAPDD529 pKa = 3.37 GTSIGKK535 pKa = 9.9 DD536 pKa = 3.13 NITTVCVDD544 pKa = 3.1 TTTFTTRR551 pKa = 11.84 LNVLAFSAFSTAVDD565 pKa = 3.81 IQAGTCPFSYY575 pKa = 11.29 NNLNNYY581 pKa = 9.99 LGFGSLCFSTRR592 pKa = 11.84 PNGGCMMSVVARR604 pKa = 11.84 GYY606 pKa = 9.89 FGEE609 pKa = 4.14 FQKK612 pKa = 11.28 VGVLYY617 pKa = 11.01 VSFTKK622 pKa = 10.63 GDD624 pKa = 3.57 NVLGVPPDD632 pKa = 3.68 NVPTIGVSDD641 pKa = 3.73 MSDD644 pKa = 2.75 VKK646 pKa = 11.41 LNVCTTFTIYY656 pKa = 10.65 GHH658 pKa = 5.54 TGRR661 pKa = 11.84 GIINKK666 pKa = 9.73 SNNTFVSGLFYY677 pKa = 10.84 TSVTGNLLGFKK688 pKa = 10.45 NSTTGEE694 pKa = 4.0 IFSISPCQLTTQVAVVSDD712 pKa = 4.41 KK713 pKa = 11.04 IVGVAAATKK722 pKa = 9.06 EE723 pKa = 4.15 VKK725 pKa = 10.64 LPFDD729 pKa = 3.47 THH731 pKa = 6.71 VSLGSFYY738 pKa = 11.14 YY739 pKa = 10.56 HH740 pKa = 6.92 FSNSSAEE747 pKa = 4.08 LCKK750 pKa = 10.85 NPSLMYY756 pKa = 10.57 GGLGVCEE763 pKa = 5.02 DD764 pKa = 3.57 GRR766 pKa = 11.84 LVNISRR772 pKa = 11.84 SEE774 pKa = 4.02 DD775 pKa = 3.45 TFVPSAVISGNITIPANFSFVVQPEE800 pKa = 4.31 YY801 pKa = 10.43 IQIMTKK807 pKa = 9.87 PVSVDD812 pKa = 2.99 CSVYY816 pKa = 10.26 VCNGNPRR823 pKa = 11.84 CLQLLTQYY831 pKa = 11.57 ASVCRR836 pKa = 11.84 TVEE839 pKa = 4.29 EE840 pKa = 4.13 PLQLNARR847 pKa = 11.84 LEE849 pKa = 4.16 ALEE852 pKa = 4.37 LTSMIIVQDD861 pKa = 3.61 KK862 pKa = 9.2 TLHH865 pKa = 6.43 LGVASNFNDD874 pKa = 3.82 TFDD877 pKa = 3.91 LTLALPRR884 pKa = 11.84 QHH886 pKa = 6.45 QSRR889 pKa = 11.84 SAIEE893 pKa = 4.54 DD894 pKa = 3.65 LLFSKK899 pKa = 10.43 IVTSGLGTVDD909 pKa = 5.34 DD910 pKa = 5.32 DD911 pKa = 4.97 YY912 pKa = 11.92 KK913 pKa = 11.26 EE914 pKa = 4.45 CAAKK918 pKa = 9.16 MANTIAEE925 pKa = 4.49 AGCVQYY931 pKa = 11.5 YY932 pKa = 9.78 NGIMVLPGVVDD943 pKa = 4.33 PSLLSQYY950 pKa = 9.05 TAALTGAMVLGGVTAAAAIPFSLAVQARR978 pKa = 11.84 LNYY981 pKa = 10.03 LALQTDD987 pKa = 4.14 VLQRR991 pKa = 11.84 NQMILAQSFNAAMGNITVAFSGVSNAIQQTAQSLNTISQALNKK1034 pKa = 9.73 VEE1036 pKa = 4.27 NVVNEE1041 pKa = 3.91 QGTALSQLTKK1051 pKa = 10.61 QLASNFQAISSSIEE1065 pKa = 3.69 DD1066 pKa = 3.97 LYY1068 pKa = 11.84 NRR1070 pKa = 11.84 LDD1072 pKa = 3.6 TLEE1075 pKa = 5.38 ADD1077 pKa = 3.74 QQVDD1081 pKa = 3.46 RR1082 pKa = 11.84 LITGRR1087 pKa = 11.84 LAALNAFVTQQLLRR1101 pKa = 11.84 YY1102 pKa = 8.9 SEE1104 pKa = 4.28 VRR1106 pKa = 11.84 ASRR1109 pKa = 11.84 QLAQEE1114 pKa = 4.75 KK1115 pKa = 10.45 INEE1118 pKa = 4.44 CVKK1121 pKa = 10.53 SQSSRR1126 pKa = 11.84 YY1127 pKa = 8.35 GFCGNGTHH1135 pKa = 5.87 VFSVANAAPDD1145 pKa = 4.45 GIMFLHH1151 pKa = 6.91 ANLVPTAFIEE1161 pKa = 4.41 VSAFAGVCVDD1171 pKa = 3.46 GRR1173 pKa = 11.84 ALVLRR1178 pKa = 11.84 GRR1180 pKa = 11.84 DD1181 pKa = 3.0 EE1182 pKa = 4.81 VLFQKK1187 pKa = 10.66 PGTNDD1192 pKa = 3.15 YY1193 pKa = 11.03 LITPRR1198 pKa = 11.84 LLFEE1202 pKa = 4.25 PRR1204 pKa = 11.84 VPVSADD1210 pKa = 3.25 FVEE1213 pKa = 4.87 VSSCNVTFINLTINEE1228 pKa = 4.53 LPEE1231 pKa = 4.46 LLPDD1235 pKa = 4.18 YY1236 pKa = 10.98 IDD1238 pKa = 3.45 VNKK1241 pKa = 9.25 TLKK1244 pKa = 10.34 EE1245 pKa = 3.88 FAATIPNRR1253 pKa = 11.84 TEE1255 pKa = 3.59 MQLTLNTYY1263 pKa = 9.78 NATVLNLTDD1272 pKa = 3.74 EE1273 pKa = 4.85 VKK1275 pKa = 10.99 SLMSQADD1282 pKa = 4.45 DD1283 pKa = 3.54 LTKK1286 pKa = 10.24 IASEE1290 pKa = 4.28 LNLTISKK1297 pKa = 10.27 INNTLVEE1304 pKa = 4.51 LEE1306 pKa = 3.89 WLNRR1310 pKa = 11.84 VEE1312 pKa = 5.97 TYY1314 pKa = 10.4 IKK1316 pKa = 9.3 WPWYY1320 pKa = 7.96 VWLAIAVTLIILVGLMLWCCLATGCCGCCSCLVNSCGDD1358 pKa = 3.59 CGGKK1362 pKa = 9.74 RR1363 pKa = 11.84 LQRR1366 pKa = 11.84 YY1367 pKa = 8.14 EE1368 pKa = 3.77 IEE1370 pKa = 4.3 KK1371 pKa = 10.33 VHH1373 pKa = 5.94 IQQ1375 pKa = 3.19
Molecular weight: 150.65 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.041
IPC2_protein 5.245
IPC_protein 5.232
Toseland 5.245
ProMoST 5.436
Dawson 5.296
Bjellqvist 5.397
Wikipedia 5.207
Rodwell 5.219
Grimsley 5.194
Solomon 5.296
Lehninger 5.27
Nozaki 5.448
DTASelect 5.639
Thurlkill 5.334
EMBOSS 5.321
Sillero 5.525
Patrickios 1.672
IPC_peptide 5.308
IPC2_peptide 5.525
IPC2.peptide.svr19 5.352
Protein with the highest isoelectric point:
>tr|A0A0U1WHB2|A0A0U1WHB2_9ALPC 3C-like proteinase OS=BtMf-AlphaCoV/AH2011 OX=1503278 PE=3 SV=1
MM1 pKa = 7.75 ASVQFEE7 pKa = 4.47 DD8 pKa = 3.64 TNSRR12 pKa = 11.84 GRR14 pKa = 11.84 SGRR17 pKa = 11.84 IPLSYY22 pKa = 9.62 YY23 pKa = 10.63 APVRR27 pKa = 11.84 VADD30 pKa = 4.65 DD31 pKa = 3.83 KK32 pKa = 11.82 LFLKK36 pKa = 10.66 SMPGNGVPKK45 pKa = 10.76 GMGGKK50 pKa = 9.77 AEE52 pKa = 4.14 QIGYY56 pKa = 6.34 WTEE59 pKa = 3.6 QRR61 pKa = 11.84 RR62 pKa = 11.84 WRR64 pKa = 11.84 MNKK67 pKa = 8.32 GQRR70 pKa = 11.84 KK71 pKa = 8.92 DD72 pKa = 4.4 LPSNWHH78 pKa = 6.54 FYY80 pKa = 10.83 YY81 pKa = 10.82 LGTGPHH87 pKa = 6.91 ADD89 pKa = 2.92 LKK91 pKa = 10.62 FRR93 pKa = 11.84 EE94 pKa = 4.21 RR95 pKa = 11.84 QVGVFWVAKK104 pKa = 9.45 QGSKK108 pKa = 9.38 TEE110 pKa = 4.03 PTNLGTRR117 pKa = 11.84 NRR119 pKa = 11.84 NQQLRR124 pKa = 11.84 IPEE127 pKa = 4.11 FDD129 pKa = 3.1 FTLPDD134 pKa = 3.11 SLEE137 pKa = 4.06 IVNSDD142 pKa = 2.95 SRR144 pKa = 11.84 PASRR148 pKa = 11.84 SNSRR152 pKa = 11.84 SQSKK156 pKa = 10.82 SNNQSRR162 pKa = 11.84 SNSKK166 pKa = 10.5 ARR168 pKa = 11.84 DD169 pKa = 3.42 QSGTRR174 pKa = 11.84 TPKK177 pKa = 10.4 NASQNQKK184 pKa = 9.64 PKK186 pKa = 10.77 KK187 pKa = 9.04 NQQEE191 pKa = 4.18 DD192 pKa = 3.64 LVAAVRR198 pKa = 11.84 EE199 pKa = 4.15 ALKK202 pKa = 11.01 GLGIQQSRR210 pKa = 11.84 SSSGKK215 pKa = 8.13 STPARR220 pKa = 11.84 SKK222 pKa = 11.13 SPARR226 pKa = 11.84 PSNKK230 pKa = 9.31 KK231 pKa = 9.84 QLDD234 pKa = 3.49 KK235 pKa = 11.31 PEE237 pKa = 4.08 WKK239 pKa = 9.82 RR240 pKa = 11.84 VPNRR244 pKa = 11.84 TEE246 pKa = 3.54 NATTCFGQRR255 pKa = 11.84 SVEE258 pKa = 4.2 RR259 pKa = 11.84 NCGSASVVGMGVEE272 pKa = 4.43 APNFPQIAEE281 pKa = 4.98 LIPTQAALFFGSRR294 pKa = 11.84 VSTKK298 pKa = 10.23 EE299 pKa = 3.51 VGDD302 pKa = 3.76 TVEE305 pKa = 4.23 IKK307 pKa = 10.26 YY308 pKa = 9.74 HH309 pKa = 5.79 YY310 pKa = 10.05 KK311 pKa = 9.87 MSVPKK316 pKa = 9.99 TNPNLPYY323 pKa = 10.51 FLQQVNAYY331 pKa = 9.7 LDD333 pKa = 4.12 PNSDD337 pKa = 3.17 QPIPKK342 pKa = 9.52 KK343 pKa = 10.36 PKK345 pKa = 9.69 AKK347 pKa = 10.09 PEE349 pKa = 3.99 EE350 pKa = 4.21 VPQLNPAAPVFTPPAQEE367 pKa = 3.78 PAVEE371 pKa = 4.41 LEE373 pKa = 4.26 MVDD376 pKa = 3.64 EE377 pKa = 4.78 VFDD380 pKa = 4.29 IDD382 pKa = 4.1 PLGDD386 pKa = 3.55 SVAA389 pKa = 3.81
Molecular weight: 43.31 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.019
IPC2_protein 9.136
IPC_protein 9.077
Toseland 10.028
ProMoST 9.604
Dawson 10.175
Bjellqvist 9.794
Wikipedia 10.306
Rodwell 10.687
Grimsley 10.233
Solomon 10.204
Lehninger 10.175
Nozaki 10.014
DTASelect 9.794
Thurlkill 10.043
EMBOSS 10.409
Sillero 10.087
Patrickios 10.335
IPC_peptide 10.204
IPC2_peptide 8.244
IPC2.peptide.svr19 8.141
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
6
0
6
9241
74
6931
1540.2
171.13
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.558 ± 0.124
3.344 ± 0.558
5.476 ± 0.756
4.145 ± 0.26
5.746 ± 0.386
6.493 ± 0.311
1.84 ± 0.272
5.378 ± 0.576
5.724 ± 0.929
8.311 ± 0.808
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.056 ± 0.241
6.352 ± 0.659
3.528 ± 0.852
2.738 ± 0.769
3.322 ± 0.575
7.359 ± 0.398
5.995 ± 0.728
10.096 ± 0.77
1.115 ± 0.286
4.415 ± 0.389
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here