Mesocestoides corti

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Mesocestoididae; Mesocestoides

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10572 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R3UD67|A0A0R3UD67_9CEST Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS4866 PE=4 SV=1
MM1 pKa = 7.73KK2 pKa = 8.09MTTLTTTANLPDD14 pKa = 3.84YY15 pKa = 11.04QFATDD20 pKa = 5.42DD21 pKa = 3.78YY22 pKa = 8.97TASIPAYY29 pKa = 8.88ISPITTTPPSTTNTASDD46 pKa = 4.12DD47 pKa = 3.68QSHH50 pKa = 6.61TDD52 pKa = 2.78NHH54 pKa = 6.04TASNPADD61 pKa = 4.01LSPTKK66 pKa = 10.04ATAPSTAIASSDD78 pKa = 3.5NQSYY82 pKa = 9.74TDD84 pKa = 4.96DD85 pKa = 3.86YY86 pKa = 11.84ANSNLADD93 pKa = 3.72ISPTTTVPLSTTNTASNDD111 pKa = 3.42MPNTDD116 pKa = 4.05GYY118 pKa = 11.51AALILTDD125 pKa = 3.91ISSMTTTPPSTTNTSSDD142 pKa = 3.48GLTLIDD148 pKa = 3.86DD149 pKa = 4.13HH150 pKa = 6.77TNPVHH155 pKa = 6.6TDD157 pKa = 2.86TFRR160 pKa = 11.84ITRR163 pKa = 11.84TTTLTTSTYY172 pKa = 10.84SQDD175 pKa = 3.21QTSSINSTAA184 pKa = 3.09

Molecular weight: 19.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3P6HTI6|A0A3P6HTI6_9CEST Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS10553 PE=4 SV=1
MM1 pKa = 7.22HH2 pKa = 7.27LWMRR6 pKa = 11.84NVMQMRR12 pKa = 11.84GRR14 pKa = 11.84RR15 pKa = 11.84KK16 pKa = 8.75RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84KK22 pKa = 8.36RR23 pKa = 11.84KK24 pKa = 7.59MMKK27 pKa = 9.6RR28 pKa = 11.84SLMRR32 pKa = 11.84MRR34 pKa = 11.84RR35 pKa = 11.84PSRR38 pKa = 3.37

Molecular weight: 5.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10572

0

10572

4885022

30

6604

462.1

51.3

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.677 ± 0.025

2.179 ± 0.015

5.213 ± 0.019

5.961 ± 0.028

3.976 ± 0.018

5.818 ± 0.029

2.545 ± 0.01

4.625 ± 0.02

4.645 ± 0.022

9.759 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.998 ± 0.01

3.891 ± 0.013

6.135 ± 0.031

4.046 ± 0.018

6.324 ± 0.019

9.094 ± 0.031

5.872 ± 0.018

6.582 ± 0.02

1.106 ± 0.008

2.552 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski