Longjawed orbweaver circular virus 1

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses; Circularisvirus

Average proteome isoelectric point is 7.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BPA7|A0A346BPA7_9VIRU Putative capsid protein OS=Longjawed orbweaver circular virus 1 OX=2293294 PE=4 SV=1
MM1 pKa = 7.4SRR3 pKa = 11.84QKK5 pKa = 10.11GWCYY9 pKa = 10.06TRR11 pKa = 11.84FDD13 pKa = 3.7IEE15 pKa = 4.7NIPVYY20 pKa = 10.45NEE22 pKa = 4.06HH23 pKa = 6.86EE24 pKa = 4.12EE25 pKa = 4.35SYY27 pKa = 10.73HH28 pKa = 6.31IFGRR32 pKa = 11.84EE33 pKa = 3.65RR34 pKa = 11.84CPSTGRR40 pKa = 11.84IHH42 pKa = 5.79YY43 pKa = 10.22QGFIYY48 pKa = 9.91FKK50 pKa = 9.58QRR52 pKa = 11.84KK53 pKa = 8.91RR54 pKa = 11.84LTQLKK59 pKa = 8.72KK60 pKa = 10.55VGYY63 pKa = 7.81TGHH66 pKa = 6.56FEE68 pKa = 4.24AMRR71 pKa = 11.84GSPQQASEE79 pKa = 4.29YY80 pKa = 9.66CKK82 pKa = 10.35KK83 pKa = 10.84DD84 pKa = 2.79SDD86 pKa = 4.03YY87 pKa = 11.71TEE89 pKa = 5.42FGQLPVVSSGGSVFADD105 pKa = 3.46ALAKK109 pKa = 10.59AKK111 pKa = 10.82AGDD114 pKa = 3.58FDD116 pKa = 5.9SIEE119 pKa = 4.18EE120 pKa = 3.97NHH122 pKa = 6.81PGVFLRR128 pKa = 11.84YY129 pKa = 9.49RR130 pKa = 11.84GTLLSCFKK138 pKa = 10.89YY139 pKa = 10.83NVVEE143 pKa = 4.2LLNSCGVWICGPPRR157 pKa = 11.84SGKK160 pKa = 10.17DD161 pKa = 3.15YY162 pKa = 11.03SVRR165 pKa = 11.84KK166 pKa = 9.87LSSLYY171 pKa = 10.13IKK173 pKa = 10.02PLNKK177 pKa = 9.22WWDD180 pKa = 3.51GYY182 pKa = 9.8MNEE185 pKa = 4.42DD186 pKa = 3.31NVLISDD192 pKa = 3.8VDD194 pKa = 3.91VSHH197 pKa = 6.68GNWLGYY203 pKa = 8.57FLKK206 pKa = 10.23IWMDD210 pKa = 3.74RR211 pKa = 11.84YY212 pKa = 11.21AFIGEE217 pKa = 4.2IKK219 pKa = 10.43GGSIKK224 pKa = 10.03IRR226 pKa = 11.84PKK228 pKa = 10.56KK229 pKa = 10.79VFVTSNFLIEE239 pKa = 4.37DD240 pKa = 3.72VFVNEE245 pKa = 4.07QVCAAVKK252 pKa = 10.12ARR254 pKa = 11.84CNIYY258 pKa = 10.7NLFEE262 pKa = 4.26HH263 pKa = 6.35VVTRR267 pKa = 11.84RR268 pKa = 11.84VDD270 pKa = 3.35INPSDD275 pKa = 4.5DD276 pKa = 3.64LFKK279 pKa = 11.14LLEE282 pKa = 4.27EE283 pKa = 4.7NGDD286 pKa = 3.84VVQTSTRR293 pKa = 11.84APLSEE298 pKa = 4.06VQAEE302 pKa = 4.58VVAGPSGHH310 pKa = 6.25VPPKK314 pKa = 9.99KK315 pKa = 8.63KK316 pKa = 10.54CKK318 pKa = 8.51VAEE321 pKa = 4.18VFSDD325 pKa = 4.0SEE327 pKa = 4.26DD328 pKa = 3.81FEE330 pKa = 4.65

Molecular weight: 37.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BPA7|A0A346BPA7_9VIRU Putative capsid protein OS=Longjawed orbweaver circular virus 1 OX=2293294 PE=4 SV=1
MM1 pKa = 7.71LFRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84LGLRR10 pKa = 11.84YY11 pKa = 9.13RR12 pKa = 11.84RR13 pKa = 11.84YY14 pKa = 9.86RR15 pKa = 11.84RR16 pKa = 11.84KK17 pKa = 9.32SWPARR22 pKa = 11.84RR23 pKa = 11.84AMYY26 pKa = 9.96RR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84SAKK33 pKa = 8.79LRR35 pKa = 11.84KK36 pKa = 8.88SSRR39 pKa = 11.84IRR41 pKa = 11.84RR42 pKa = 11.84ISNDD46 pKa = 3.03YY47 pKa = 9.68TKK49 pKa = 10.06EE50 pKa = 4.13TFSDD54 pKa = 3.12VTMYY58 pKa = 11.27VLLPDD63 pKa = 3.41KK64 pKa = 10.66VKK66 pKa = 10.66PEE68 pKa = 4.3RR69 pKa = 11.84PSSTSFEE76 pKa = 4.38MFTSAIGTDD85 pKa = 3.34SMNSDD90 pKa = 3.28RR91 pKa = 11.84FGFLCTVYY99 pKa = 10.41KK100 pKa = 10.14YY101 pKa = 11.41VKK103 pKa = 9.59FNSFVWHH110 pKa = 5.27VTCDD114 pKa = 3.99PITAVSGAFAVEE126 pKa = 3.92KK127 pKa = 9.63TVVKK131 pKa = 9.63GTVSGLNEE139 pKa = 3.81FFKK142 pKa = 11.55NEE144 pKa = 3.91DD145 pKa = 4.33FYY147 pKa = 12.15VSWDD151 pKa = 3.39LNFAYY156 pKa = 10.07DD157 pKa = 3.44ASKK160 pKa = 11.07AITVKK165 pKa = 10.75DD166 pKa = 3.34LTGIHH171 pKa = 6.44AKK173 pKa = 7.98KK174 pKa = 8.86TRR176 pKa = 11.84IGGHH180 pKa = 5.92KK181 pKa = 9.62PAIFKK186 pKa = 10.12WKK188 pKa = 9.88VPQKK192 pKa = 9.82LRR194 pKa = 11.84EE195 pKa = 3.94YY196 pKa = 9.18VLCSEE201 pKa = 4.55VPDD204 pKa = 3.73ARR206 pKa = 11.84SGNVPIGSFFNNLLEE221 pKa = 4.45RR222 pKa = 11.84KK223 pKa = 9.5NINVPNYY230 pKa = 10.24FIGCGTEE237 pKa = 3.78IMRR240 pKa = 11.84KK241 pKa = 9.4LPNFNNMFDD250 pKa = 3.66DD251 pKa = 3.48VRR253 pKa = 11.84FVLRR257 pKa = 11.84VNCFVNCTFHH267 pKa = 6.91GAVILKK273 pKa = 9.13QQ274 pKa = 3.26

Molecular weight: 31.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

604

274

330

302.0

34.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.801 ± 0.19

2.483 ± 0.181

5.298 ± 0.341

5.464 ± 1.119

6.788 ± 0.766

6.457 ± 0.831

1.987 ± 0.325

4.967 ± 0.137

7.781 ± 0.153

6.291 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.821 ± 0.452

5.298 ± 0.559

4.139 ± 0.077

1.987 ± 0.775

7.45 ± 1.483

7.616 ± 0.195

4.305 ± 0.947

8.94 ± 0.112

1.656 ± 0.121

4.47 ± 0.281
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski