Capybara microvirus Cap1_SP_145

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7X8|A0A4P8W7X8_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_145 OX=2585390 PE=4 SV=1
MM1 pKa = 7.83KK2 pKa = 10.49YY3 pKa = 10.56LEE5 pKa = 5.05RR6 pKa = 11.84DD7 pKa = 3.17NKK9 pKa = 10.97SIVTVTEE16 pKa = 3.85YY17 pKa = 10.48MSLAEE22 pKa = 4.46CIAYY26 pKa = 9.02YY27 pKa = 10.63EE28 pKa = 4.47RR29 pKa = 11.84TNEE32 pKa = 4.08LPPIGEE38 pKa = 4.47TKK40 pKa = 10.81GEE42 pKa = 4.08YY43 pKa = 9.98DD44 pKa = 3.68DD45 pKa = 6.11SITISEE51 pKa = 4.31AEE53 pKa = 3.74ARR55 pKa = 11.84TINVAKK61 pKa = 10.38LYY63 pKa = 10.81KK64 pKa = 10.21FDD66 pKa = 4.95DD67 pKa = 4.24DD68 pKa = 4.54RR69 pKa = 11.84VSDD72 pKa = 3.82MDD74 pKa = 3.48ISDD77 pKa = 3.81MRR79 pKa = 11.84NSSSEE84 pKa = 4.15SYY86 pKa = 10.45ILEE89 pKa = 4.09ASAEE93 pKa = 4.03KK94 pKa = 10.5SAEE97 pKa = 3.8KK98 pKa = 10.31SAEE101 pKa = 3.63ISVEE105 pKa = 4.11NISVEE110 pKa = 4.2QVSPQATAEE119 pKa = 4.24KK120 pKa = 10.68

Molecular weight: 13.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W5G0|A0A4P8W5G0_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_145 OX=2585390 PE=4 SV=1
MM1 pKa = 7.53GSGLHH6 pKa = 6.05RR7 pKa = 11.84VNTVPCGKK15 pKa = 10.05CVACRR20 pKa = 11.84SNKK23 pKa = 9.11RR24 pKa = 11.84EE25 pKa = 3.69EE26 pKa = 4.09WASRR30 pKa = 11.84LAMEE34 pKa = 5.34YY35 pKa = 9.22YY36 pKa = 7.87TTFKK40 pKa = 10.78KK41 pKa = 10.77GFEE44 pKa = 4.32TFFITLTFNDD54 pKa = 4.37EE55 pKa = 4.08NLQNPSLDD63 pKa = 3.44KK64 pKa = 10.98RR65 pKa = 11.84DD66 pKa = 3.23IQLFNKK72 pKa = 9.7KK73 pKa = 8.87FRR75 pKa = 11.84HH76 pKa = 5.05YY77 pKa = 10.94LSYY80 pKa = 10.95KK81 pKa = 9.75YY82 pKa = 8.95FFCGEE87 pKa = 4.11YY88 pKa = 10.56GDD90 pKa = 4.28KK91 pKa = 10.39FDD93 pKa = 4.43RR94 pKa = 11.84KK95 pKa = 9.63HH96 pKa = 4.14YY97 pKa = 10.02HH98 pKa = 6.86ALIFCNTVVTPEE110 pKa = 3.92YY111 pKa = 9.27FTRR114 pKa = 11.84SLEE117 pKa = 4.14KK118 pKa = 9.13CWPYY122 pKa = 11.54GFVKK126 pKa = 10.64ADD128 pKa = 2.94NFTYY132 pKa = 10.74ARR134 pKa = 11.84ARR136 pKa = 11.84YY137 pKa = 7.08VAKK140 pKa = 10.73YY141 pKa = 10.24ALKK144 pKa = 10.43DD145 pKa = 4.13DD146 pKa = 3.92NWSDD150 pKa = 3.95TNLSPPFALMSTKK163 pKa = 10.14PAICYY168 pKa = 10.14DD169 pKa = 3.87YY170 pKa = 11.74VKK172 pKa = 10.57LFHH175 pKa = 6.12NQIYY179 pKa = 10.37DD180 pKa = 3.78GQSLFYY186 pKa = 9.53CDD188 pKa = 2.75SVGYY192 pKa = 9.99HH193 pKa = 6.36RR194 pKa = 11.84LPRR197 pKa = 11.84YY198 pKa = 9.07VKK200 pKa = 10.07EE201 pKa = 4.48KK202 pKa = 10.11IFSKK206 pKa = 10.01IWLRR210 pKa = 11.84EE211 pKa = 3.67QNDD214 pKa = 3.75AYY216 pKa = 11.41SRR218 pKa = 11.84LEE220 pKa = 3.96FNKK223 pKa = 10.08EE224 pKa = 3.78LYY226 pKa = 10.15VLRR229 pKa = 11.84NLQLLHH235 pKa = 6.7GGNHH239 pKa = 5.91NAVNSAYY246 pKa = 10.01RR247 pKa = 11.84AYY249 pKa = 9.83MYY251 pKa = 10.37QKK253 pKa = 10.41YY254 pKa = 9.9KK255 pKa = 10.78SPEE258 pKa = 3.55VNYY261 pKa = 10.02FSNKK265 pKa = 9.25YY266 pKa = 9.4IYY268 pKa = 10.75SRR270 pKa = 11.84FKK272 pKa = 11.5NNFF275 pKa = 2.99

Molecular weight: 33.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1482

106

604

296.4

34.2

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.478 ± 0.56

1.282 ± 0.429

4.858 ± 0.775

6.005 ± 1.09

5.398 ± 0.916

4.858 ± 0.625

1.619 ± 0.554

5.87 ± 0.689

6.883 ± 0.554

9.109 ± 1.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.092 ± 0.173

7.152 ± 0.949

3.509 ± 0.411

4.926 ± 1.167

3.914 ± 0.529

8.367 ± 0.683

5.466 ± 0.365

3.914 ± 0.562

1.552 ± 0.224

6.748 ± 0.861
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski