Beihai tombus-like virus 17

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KFW8|A0A1L3KFW8_9VIRU Uncharacterized protein OS=Beihai tombus-like virus 17 OX=1922720 PE=4 SV=1
MM1 pKa = 7.36MNTRR5 pKa = 11.84KK6 pKa = 9.78QIRR9 pKa = 11.84NLNFEE14 pKa = 4.94EE15 pKa = 4.22LTKK18 pKa = 10.96ACGCDD23 pKa = 3.18RR24 pKa = 11.84DD25 pKa = 3.89AQNWLKK31 pKa = 10.9VALDD35 pKa = 3.78PFHH38 pKa = 7.79DD39 pKa = 4.36YY40 pKa = 10.89NVQLAGLPDD49 pKa = 4.29NDD51 pKa = 4.4SQPSAIQIVPKK62 pKa = 10.26VYY64 pKa = 10.23QIKK67 pKa = 10.48APAGLAVNEE76 pKa = 4.29TWSAHH81 pKa = 5.68ISTLPIASTHH91 pKa = 5.76ACRR94 pKa = 11.84SYY96 pKa = 11.0YY97 pKa = 10.48RR98 pKa = 11.84NNTSGVVGDD107 pKa = 4.26AAVTLSNDD115 pKa = 3.17GQAGEE120 pKa = 4.52IGTITVITHH129 pKa = 6.29GDD131 pKa = 3.14AGGLNGYY138 pKa = 10.48DD139 pKa = 3.42NLSYY143 pKa = 9.97PANVAQATDD152 pKa = 4.17FGAITRR158 pKa = 11.84EE159 pKa = 4.05FKK161 pKa = 10.96AFSLDD166 pKa = 3.58DD167 pKa = 5.54DD168 pKa = 4.51NDD170 pKa = 3.39KK171 pKa = 10.8TMKK174 pKa = 10.51KK175 pKa = 9.65LVAGGFEE182 pKa = 4.19VHH184 pKa = 6.72NDD186 pKa = 2.87TAALYY191 pKa = 9.15KK192 pKa = 10.25QGSVTVYY199 pKa = 10.7SSGQGTQRR207 pKa = 11.84EE208 pKa = 4.48GALLRR213 pKa = 11.84NADD216 pKa = 3.4TSTVYY221 pKa = 10.19HH222 pKa = 6.18HH223 pKa = 5.08QHH225 pKa = 5.66LRR227 pKa = 11.84KK228 pKa = 9.52SRR230 pKa = 11.84QPPGSKK236 pKa = 10.39AEE238 pKa = 4.31AGSMPDD244 pKa = 2.79SRR246 pKa = 11.84TFEE249 pKa = 4.33AADD252 pKa = 3.47GCYY255 pKa = 10.4VPIRR259 pKa = 11.84LGDD262 pKa = 3.63DD263 pKa = 3.19THH265 pKa = 8.24YY266 pKa = 11.08SIASRR271 pKa = 11.84TTYY274 pKa = 9.33LTEE277 pKa = 4.28SVDD280 pKa = 3.48SSLVTTRR287 pKa = 11.84PAGYY291 pKa = 10.22VITPFAATAGYY302 pKa = 10.19SEE304 pKa = 6.02DD305 pKa = 3.41YY306 pKa = 9.95QANHH310 pKa = 6.95RR311 pKa = 11.84PLDD314 pKa = 3.56IEE316 pKa = 4.14TTGAYY321 pKa = 10.1FSGLSPEE328 pKa = 4.29TTLTLTIKK336 pKa = 10.3FIIEE340 pKa = 4.33LCPTSSNQAMLYY352 pKa = 7.85MASPTAMYY360 pKa = 9.9CPRR363 pKa = 11.84AIEE366 pKa = 5.34LYY368 pKa = 9.39HH369 pKa = 7.39QMIRR373 pKa = 11.84SLPPGVPVSFNDD385 pKa = 3.19KK386 pKa = 10.92GDD388 pKa = 3.72WFRR391 pKa = 11.84MATKK395 pKa = 10.61VMADD399 pKa = 3.44VAPLVSPFLSALNPTLGAGVQLAGQVAKK427 pKa = 9.41ATNKK431 pKa = 10.31AISKK435 pKa = 9.92QEE437 pKa = 3.75TSVAPNQKK445 pKa = 8.41STQPPPRR452 pKa = 11.84TKK454 pKa = 10.42VVSQPNIGRR463 pKa = 11.84SVARR467 pKa = 11.84KK468 pKa = 9.07KK469 pKa = 10.7

Molecular weight:
50.61 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KFW8|A0A1L3KFW8_9VIRU Uncharacterized protein OS=Beihai tombus-like virus 17 OX=1922720 PE=4 SV=1
MM1 pKa = 7.48GKK3 pKa = 9.8KK4 pKa = 9.95KK5 pKa = 10.76SRR7 pKa = 11.84FRR9 pKa = 11.84DD10 pKa = 3.12KK11 pKa = 11.33DD12 pKa = 3.66LLDD15 pKa = 3.72EE16 pKa = 5.3RR17 pKa = 11.84GLGDD21 pKa = 3.65GPVNEE26 pKa = 4.05PQKK29 pKa = 10.83RR30 pKa = 11.84KK31 pKa = 10.54DD32 pKa = 3.48YY33 pKa = 10.81LRR35 pKa = 11.84EE36 pKa = 3.76RR37 pKa = 11.84NLISFKK43 pKa = 11.21GEE45 pKa = 3.41NTGRR49 pKa = 11.84QNQKK53 pKa = 10.43FEE55 pKa = 4.88DD56 pKa = 4.66DD57 pKa = 3.73YY58 pKa = 11.9NSYY61 pKa = 11.04LKK63 pKa = 10.65RR64 pKa = 11.84EE65 pKa = 4.04PVSNKK70 pKa = 9.32EE71 pKa = 3.89KK72 pKa = 10.04EE73 pKa = 4.42AKK75 pKa = 10.03EE76 pKa = 3.64KK77 pKa = 9.26TAYY80 pKa = 9.32NARR83 pKa = 11.84IRR85 pKa = 11.84LLRR88 pKa = 11.84KK89 pKa = 10.14DD90 pKa = 4.17KK91 pKa = 10.79EE92 pKa = 4.35LTDD95 pKa = 3.9GKK97 pKa = 9.43PVKK100 pKa = 10.43GQIRR104 pKa = 11.84ILDD107 pKa = 3.69DD108 pKa = 4.76KK109 pKa = 10.57ITVGGSKK116 pKa = 10.19NVTYY120 pKa = 10.32AVPGIRR126 pKa = 11.84RR127 pKa = 11.84PEE129 pKa = 3.94TQRR132 pKa = 11.84VDD134 pKa = 2.87GGNRR138 pKa = 11.84MRR140 pKa = 11.84DD141 pKa = 3.4RR142 pKa = 11.84QGKK145 pKa = 6.18GHH147 pKa = 6.25RR148 pKa = 11.84TVVPHH153 pKa = 5.82PRR155 pKa = 11.84EE156 pKa = 3.77YY157 pKa = 10.75TIVDD161 pKa = 3.51NSSEE165 pKa = 4.15MTVTFHH171 pKa = 7.1GFFSEE176 pKa = 4.54VVTFTTLPKK185 pKa = 9.48PHH187 pKa = 6.66QSRR190 pKa = 11.84LDD192 pKa = 3.52RR193 pKa = 11.84HH194 pKa = 6.61GGGQDD199 pKa = 3.68DD200 pKa = 4.37NDD202 pKa = 3.98VVYY205 pKa = 9.13TWDD208 pKa = 3.23LGRR211 pKa = 11.84IKK213 pKa = 10.54RR214 pKa = 11.84NKK216 pKa = 9.2LVHH219 pKa = 6.07ALKK222 pKa = 11.0GNTPYY227 pKa = 10.48VWHH230 pKa = 6.57VPRR233 pKa = 11.84KK234 pKa = 8.54EE235 pKa = 3.97ANKK238 pKa = 9.92LQHH241 pKa = 6.41SLNGNTPEE249 pKa = 4.58AEE251 pKa = 4.17PKK253 pKa = 10.36KK254 pKa = 10.48AVCNTCGKK262 pKa = 9.84EE263 pKa = 3.92GHH265 pKa = 6.47FKK267 pKa = 10.74RR268 pKa = 11.84NCPKK272 pKa = 10.66AGAKK276 pKa = 10.11GGGRR280 pKa = 11.84GGDD283 pKa = 3.21KK284 pKa = 9.73MLKK287 pKa = 10.05RR288 pKa = 11.84GMADD292 pKa = 2.95MEE294 pKa = 4.3AQRR297 pKa = 11.84KK298 pKa = 9.13AEE300 pKa = 3.96NDD302 pKa = 2.99NAKK305 pKa = 10.19EE306 pKa = 3.94KK307 pKa = 10.99RR308 pKa = 11.84GDD310 pKa = 3.44QKK312 pKa = 11.22KK313 pKa = 9.86EE314 pKa = 3.72KK315 pKa = 9.95EE316 pKa = 4.06AVKK319 pKa = 10.68CRR321 pKa = 11.84FFNDD325 pKa = 2.85NLEE328 pKa = 4.59PIRR331 pKa = 11.84FKK333 pKa = 11.55VEE335 pKa = 3.6VKK337 pKa = 10.74EE338 pKa = 4.18PVTPMSWIRR347 pKa = 11.84LGFLFRR353 pKa = 11.84IAPLMMGFFFFDD365 pKa = 3.43LGLWPHH371 pKa = 6.98ISNLAATLAEE381 pKa = 4.29HH382 pKa = 5.94VVHH385 pKa = 6.96VILFLPVFVGMMMLEE400 pKa = 4.36NIFVGLVAYY409 pKa = 9.13RR410 pKa = 11.84AKK412 pKa = 10.8AVFTFFLGKK421 pKa = 8.84LTVRR425 pKa = 11.84HH426 pKa = 6.5SIALYY431 pKa = 8.5PVPDD435 pKa = 3.33HH436 pKa = 7.4RR437 pKa = 11.84EE438 pKa = 3.67FSVEE442 pKa = 3.61EE443 pKa = 4.08DD444 pKa = 4.27KK445 pKa = 11.49RR446 pKa = 11.84PLDD449 pKa = 3.6CTFGPRR455 pKa = 11.84AYY457 pKa = 10.44VAGICRR463 pKa = 11.84YY464 pKa = 7.55TVTEE468 pKa = 3.97CFYY471 pKa = 11.52VSFPYY476 pKa = 9.32WQIHH480 pKa = 4.7MALGSRR486 pKa = 11.84RR487 pKa = 11.84LAVRR491 pKa = 11.84EE492 pKa = 4.08CSSTAIALYY501 pKa = 10.59GSVINSNLTVEE512 pKa = 5.07EE513 pKa = 3.93YY514 pKa = 10.8RR515 pKa = 11.84DD516 pKa = 3.77AIRR519 pKa = 11.84RR520 pKa = 11.84NLSKK524 pKa = 10.48CSKK527 pKa = 9.74IDD529 pKa = 3.09WDD531 pKa = 3.98AEE533 pKa = 3.77EE534 pKa = 4.61MIRR537 pKa = 11.84GNILEE542 pKa = 4.3NTCSYY547 pKa = 11.43LEE549 pKa = 3.93YY550 pKa = 10.88LKK552 pKa = 11.21LKK554 pKa = 10.18VDD556 pKa = 3.42QGDD559 pKa = 3.57FDD561 pKa = 4.43KK562 pKa = 11.45SLEE565 pKa = 3.96NRR567 pKa = 11.84SYY569 pKa = 11.74EE570 pKa = 4.72DD571 pKa = 2.94VDD573 pKa = 5.55LFDD576 pKa = 5.69APWFHH581 pKa = 6.55TKK583 pKa = 10.14AGRR586 pKa = 11.84IFSVLFVLGLVYY598 pKa = 10.61FGGGTLASIVMALFRR613 pKa = 11.84VVAAVWTAISAFMVQCNEE631 pKa = 3.82FAGSIASLRR640 pKa = 11.84PLGVYY645 pKa = 9.98GYY647 pKa = 10.06SVSDD651 pKa = 4.36PIFQNVSINEE661 pKa = 3.81VDD663 pKa = 3.5PEE665 pKa = 4.21KK666 pKa = 10.67FLSFTSIFPALNKK679 pKa = 8.89TRR681 pKa = 11.84AVMATFSPFAIPGIALPMTDD701 pKa = 4.23RR702 pKa = 11.84GDD704 pKa = 3.84MLTTAAGLIHH714 pKa = 7.19RR715 pKa = 11.84GAALTPKK722 pKa = 9.82VDD724 pKa = 4.78KK725 pKa = 10.23IWNRR729 pKa = 11.84AKK731 pKa = 10.68RR732 pKa = 11.84EE733 pKa = 3.96IVDD736 pKa = 3.78QIVDD740 pKa = 3.77RR741 pKa = 11.84FFLPLSDD748 pKa = 4.04SDD750 pKa = 5.66LIGFDD755 pKa = 4.22EE756 pKa = 5.48MIDD759 pKa = 3.61NTNYY763 pKa = 9.78TLDD766 pKa = 3.4RR767 pKa = 11.84KK768 pKa = 10.33KK769 pKa = 10.55QIKK772 pKa = 7.58TWHH775 pKa = 6.76KK776 pKa = 10.05NRR778 pKa = 11.84KK779 pKa = 9.01SDD781 pKa = 3.52FARR784 pKa = 11.84PTKK787 pKa = 10.48HH788 pKa = 6.72KK789 pKa = 8.52EE790 pKa = 3.47TGMFNKK796 pKa = 10.13EE797 pKa = 3.46EE798 pKa = 4.58PYY800 pKa = 10.86SVLKK804 pKa = 9.21QARR807 pKa = 11.84SIQGMYY813 pKa = 10.4RR814 pKa = 11.84SLLEE818 pKa = 3.92SDD820 pKa = 3.21VWGSVGRR827 pKa = 11.84LVHH830 pKa = 6.03TVQKK834 pKa = 9.21TVYY837 pKa = 9.59SLPPSIKK844 pKa = 10.32KK845 pKa = 10.03LDD847 pKa = 3.61PQGIVDD853 pKa = 4.5KK854 pKa = 10.73LLSLGPGSKK863 pKa = 8.77TVSDD867 pKa = 4.01YY868 pKa = 11.76SSYY871 pKa = 10.36EE872 pKa = 3.63ASFKK876 pKa = 9.98EE877 pKa = 4.59TVKK880 pKa = 10.53EE881 pKa = 3.65AAQFRR886 pKa = 11.84LYY888 pKa = 11.11DD889 pKa = 3.68RR890 pKa = 11.84LTEE893 pKa = 4.08NLSGYY898 pKa = 9.81AKK900 pKa = 9.73QVRR903 pKa = 11.84GQARR907 pKa = 11.84WVLGRR912 pKa = 11.84EE913 pKa = 3.74VSVRR917 pKa = 11.84NKK919 pKa = 10.01FFNASIKK926 pKa = 10.39NIKK929 pKa = 10.15CSGDD933 pKa = 3.19FDD935 pKa = 4.19TSLSNWFDD943 pKa = 4.19NVATWLTVFEE953 pKa = 4.72MKK955 pKa = 10.48HH956 pKa = 4.79GVHH959 pKa = 5.61WTDD962 pKa = 3.91AINWILCEE970 pKa = 4.21GDD972 pKa = 5.28DD973 pKa = 5.87NITDD977 pKa = 3.41DD978 pKa = 4.59HH979 pKa = 7.03GYY981 pKa = 8.13TFEE984 pKa = 5.86KK985 pKa = 10.78EE986 pKa = 4.32DD987 pKa = 3.75FAKK990 pKa = 10.79LGMTAKK996 pKa = 10.05IEE998 pKa = 4.34SGLEE1002 pKa = 3.55LSEE1005 pKa = 5.84AGFCQKK1011 pKa = 10.2YY1012 pKa = 9.86VNVSTGTLIGDD1023 pKa = 4.27VITFLGKK1030 pKa = 9.88RR1031 pKa = 11.84QYY1033 pKa = 11.36LPARR1037 pKa = 11.84YY1038 pKa = 8.93QNSSQVTKK1046 pKa = 10.96LSLSKK1051 pKa = 9.69ATAMSVLSMFKK1062 pKa = 9.95NAPGISEE1069 pKa = 3.87WAYY1072 pKa = 10.03KK1073 pKa = 10.32VLEE1076 pKa = 4.31LTSGITVRR1084 pKa = 11.84AKK1086 pKa = 10.57HH1087 pKa = 5.81LVAEE1091 pKa = 4.49VDD1093 pKa = 3.41KK1094 pKa = 10.51HH1095 pKa = 5.18AHH1097 pKa = 5.84SGTGVKK1103 pKa = 10.6LSTLFTKK1110 pKa = 10.35PVILDD1115 pKa = 3.12SDD1117 pKa = 4.44RR1118 pKa = 11.84IMVSRR1123 pKa = 11.84VFGFTLEE1130 pKa = 4.04QQAILTTALDD1140 pKa = 3.42AWTGGPLQLPLSWFPDD1156 pKa = 3.36LWRR1159 pKa = 11.84DD1160 pKa = 3.76FYY1162 pKa = 11.75GGYY1165 pKa = 8.08NTLLVGPSHH1174 pKa = 6.79EE1175 pKa = 4.89FFNEE1179 pKa = 3.75TNTISEE1185 pKa = 4.51LRR1187 pKa = 11.84RR1188 pKa = 11.84KK1189 pKa = 9.82FPEE1192 pKa = 4.04LLEE1195 pKa = 4.26

Molecular weight:
135.4 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1664

469

1195

832.0

93.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.572 ± 1.67

1.202 ± 0.039

5.889 ± 0.067

5.228 ± 0.919

4.808 ± 1.029

7.212 ± 0.089

2.284 ± 0.031

4.627 ± 0.076

6.851 ± 1.092

8.293 ± 0.636

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.224 ± 0.046

4.567 ± 0.17

4.748 ± 0.726

3.185 ± 0.761

5.889 ± 0.714

6.851 ± 0.633

6.731 ± 1.017

7.091 ± 0.351

1.382 ± 0.375

3.365 ± 0.347

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski