Circovirus-like genome DCCV-1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A190WH92|A0A190WH92_9CIRC ATP-dependent helicase Rep OS=Circovirus-like genome DCCV-1 OX=1788437 PE=3 SV=1
MM1 pKa = 7.29ATRR4 pKa = 11.84HH5 pKa = 5.27VVFTINNWTEE15 pKa = 4.2EE16 pKa = 3.48IWLEE20 pKa = 4.01VTQFDD25 pKa = 3.56WLYY28 pKa = 9.87VVVGKK33 pKa = 10.39EE34 pKa = 3.68IGEE37 pKa = 4.35SGTPHH42 pKa = 5.84LQGYY46 pKa = 9.16GCFHH50 pKa = 7.04KK51 pKa = 10.34KK52 pKa = 7.76QRR54 pKa = 11.84YY55 pKa = 5.61ATLARR60 pKa = 11.84KK61 pKa = 8.4WKK63 pKa = 9.77GHH65 pKa = 5.45FEE67 pKa = 4.18VSRR70 pKa = 11.84GTPQQASDD78 pKa = 3.77YY79 pKa = 8.91CKK81 pKa = 10.51KK82 pKa = 10.85GGDD85 pKa = 3.66YY86 pKa = 10.66FEE88 pKa = 6.17KK89 pKa = 11.22GEE91 pKa = 4.1LPEE94 pKa = 4.28SQSAKK99 pKa = 10.3GGEE102 pKa = 4.22ATKK105 pKa = 10.76KK106 pKa = 10.12LYY108 pKa = 10.75EE109 pKa = 4.46DD110 pKa = 4.38AFSLAQKK117 pKa = 10.99GEE119 pKa = 4.05ILSIPEE125 pKa = 3.75PLRR128 pKa = 11.84TRR130 pKa = 11.84FYY132 pKa = 10.3ATYY135 pKa = 10.42KK136 pKa = 10.45KK137 pKa = 10.1VAKK140 pKa = 10.16DD141 pKa = 3.45YY142 pKa = 9.59MPKK145 pKa = 10.17PEE147 pKa = 4.72SLSEE151 pKa = 4.49LKK153 pKa = 10.83NLWICGEE160 pKa = 4.08AGVGKK165 pKa = 8.15TVLADD170 pKa = 4.88LILPDD175 pKa = 5.15AYY177 pKa = 11.23SKK179 pKa = 11.26NCNKK183 pKa = 9.26WWDD186 pKa = 4.07GYY188 pKa = 9.2QNEE191 pKa = 4.76PGVIINDD198 pKa = 3.76LGIEE202 pKa = 4.15HH203 pKa = 7.15KK204 pKa = 11.1VLGHH208 pKa = 6.35HH209 pKa = 6.51LKK211 pKa = 10.68LWGEE215 pKa = 3.95HH216 pKa = 6.04RR217 pKa = 11.84GFIAEE222 pKa = 4.29TKK224 pKa = 10.47GGALHH229 pKa = 6.66IRR231 pKa = 11.84PEE233 pKa = 4.32RR234 pKa = 11.84IIITSQYY241 pKa = 10.55EE242 pKa = 3.7IGQVFEE248 pKa = 4.43DD249 pKa = 3.95WEE251 pKa = 4.28TRR253 pKa = 11.84DD254 pKa = 3.75AIRR257 pKa = 11.84RR258 pKa = 11.84RR259 pKa = 11.84YY260 pKa = 8.62KK261 pKa = 8.31QHH263 pKa = 6.85KK264 pKa = 8.3LTGAFTRR271 pKa = 11.84EE272 pKa = 3.76ALIEE276 pKa = 4.08LASKK280 pKa = 10.49LL281 pKa = 3.79

Molecular weight: 32.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A190WH92|A0A190WH92_9CIRC ATP-dependent helicase Rep OS=Circovirus-like genome DCCV-1 OX=1788437 PE=3 SV=1
MM1 pKa = 7.29ATRR4 pKa = 11.84HH5 pKa = 5.27VVFTINNWTEE15 pKa = 4.2EE16 pKa = 3.48IWLEE20 pKa = 4.01VTQFDD25 pKa = 3.56WLYY28 pKa = 9.87VVVGKK33 pKa = 10.39EE34 pKa = 3.68IGEE37 pKa = 4.35SGTPHH42 pKa = 5.84LQGYY46 pKa = 9.16GCFHH50 pKa = 7.04KK51 pKa = 10.34KK52 pKa = 7.76QRR54 pKa = 11.84YY55 pKa = 5.61ATLARR60 pKa = 11.84KK61 pKa = 8.4WKK63 pKa = 9.77GHH65 pKa = 5.45FEE67 pKa = 4.18VSRR70 pKa = 11.84GTPQQASDD78 pKa = 3.77YY79 pKa = 8.91CKK81 pKa = 10.51KK82 pKa = 10.85GGDD85 pKa = 3.66YY86 pKa = 10.66FEE88 pKa = 6.17KK89 pKa = 11.22GEE91 pKa = 4.1LPEE94 pKa = 4.28SQSAKK99 pKa = 10.3GGEE102 pKa = 4.22ATKK105 pKa = 10.76KK106 pKa = 10.12LYY108 pKa = 10.75EE109 pKa = 4.46DD110 pKa = 4.38AFSLAQKK117 pKa = 10.99GEE119 pKa = 4.05ILSIPEE125 pKa = 3.75PLRR128 pKa = 11.84TRR130 pKa = 11.84FYY132 pKa = 10.3ATYY135 pKa = 10.42KK136 pKa = 10.45KK137 pKa = 10.1VAKK140 pKa = 10.16DD141 pKa = 3.45YY142 pKa = 9.59MPKK145 pKa = 10.17PEE147 pKa = 4.72SLSEE151 pKa = 4.49LKK153 pKa = 10.83NLWICGEE160 pKa = 4.08AGVGKK165 pKa = 8.15TVLADD170 pKa = 4.88LILPDD175 pKa = 5.15AYY177 pKa = 11.23SKK179 pKa = 11.26NCNKK183 pKa = 9.26WWDD186 pKa = 4.07GYY188 pKa = 9.2QNEE191 pKa = 4.76PGVIINDD198 pKa = 3.76LGIEE202 pKa = 4.15HH203 pKa = 7.15KK204 pKa = 11.1VLGHH208 pKa = 6.35HH209 pKa = 6.51LKK211 pKa = 10.68LWGEE215 pKa = 3.95HH216 pKa = 6.04RR217 pKa = 11.84GFIAEE222 pKa = 4.29TKK224 pKa = 10.47GGALHH229 pKa = 6.66IRR231 pKa = 11.84PEE233 pKa = 4.32RR234 pKa = 11.84IIITSQYY241 pKa = 10.55EE242 pKa = 3.7IGQVFEE248 pKa = 4.43DD249 pKa = 3.95WEE251 pKa = 4.28TRR253 pKa = 11.84DD254 pKa = 3.75AIRR257 pKa = 11.84RR258 pKa = 11.84RR259 pKa = 11.84YY260 pKa = 8.62KK261 pKa = 8.31QHH263 pKa = 6.85KK264 pKa = 8.3LTGAFTRR271 pKa = 11.84EE272 pKa = 3.76ALIEE276 pKa = 4.08LASKK280 pKa = 10.49LL281 pKa = 3.79

Molecular weight: 32.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

281

281

281

281.0

32.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.762 ± 0.0

1.423 ± 0.0

3.915 ± 0.0

9.253 ± 0.0

3.559 ± 0.0

9.253 ± 0.0

3.559 ± 0.0

6.406 ± 0.0

9.253 ± 0.0

8.541 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

0.712 ± 0.0

2.491 ± 0.0

3.559 ± 0.0

3.915 ± 0.0

4.982 ± 0.0

4.27 ± 0.0

5.694 ± 0.0

4.626 ± 0.0

3.203 ± 0.0

4.626 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski