Inhangapi virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Arurhavirus; Inhangapi arurhavirus

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D3R128|A0A0D3R128_9RHAB Nucleocapsid protein OS=Inhangapi virus OX=1620892 PE=4 SV=1
MM1 pKa = 7.61EE2 pKa = 5.65KK3 pKa = 10.43FNSSNFCFPDD13 pKa = 3.26MSSTFKK19 pKa = 10.77DD20 pKa = 2.87IRR22 pKa = 11.84EE23 pKa = 3.95ISDD26 pKa = 4.69LIEE29 pKa = 5.83DD30 pKa = 5.08DD31 pKa = 5.28LPPPPPDD38 pKa = 4.23PPTFDD43 pKa = 3.06SAEE46 pKa = 4.15FPNQQLDD53 pKa = 3.2WGDD56 pKa = 3.52KK57 pKa = 7.57VTEE60 pKa = 3.91EE61 pKa = 4.15AARR64 pKa = 11.84GDD66 pKa = 3.7WEE68 pKa = 4.54LPPPAGDD75 pKa = 3.16NVFTFRR81 pKa = 11.84TSSLKK86 pKa = 10.64DD87 pKa = 3.25LEE89 pKa = 4.26RR90 pKa = 11.84AAIEE94 pKa = 4.21SEE96 pKa = 4.62LINLIAWIYY105 pKa = 10.19KK106 pKa = 8.19HH107 pKa = 5.58THH109 pKa = 5.83LLLDD113 pKa = 3.82YY114 pKa = 10.15RR115 pKa = 11.84VSDD118 pKa = 4.33DD119 pKa = 4.91GIDD122 pKa = 3.31VLTIEE127 pKa = 4.9KK128 pKa = 10.65GEE130 pKa = 4.08SLEE133 pKa = 4.15WEE135 pKa = 4.28NPKK138 pKa = 10.29PEE140 pKa = 4.16QPSPCSVNGKK150 pKa = 7.76TLDD153 pKa = 4.37DD154 pKa = 4.05ALADD158 pKa = 3.63YY159 pKa = 10.73RR160 pKa = 11.84EE161 pKa = 4.19LMKK164 pKa = 10.25IEE166 pKa = 4.68PPAKK170 pKa = 9.33PVPEE174 pKa = 4.08TSRR177 pKa = 11.84EE178 pKa = 4.08SKK180 pKa = 9.37TVNKK184 pKa = 9.85NVSYY188 pKa = 10.54QKK190 pKa = 10.92EE191 pKa = 4.29KK192 pKa = 10.32MGEE195 pKa = 4.09TEE197 pKa = 4.15GGKK200 pKa = 10.07KK201 pKa = 9.83PGSLYY206 pKa = 10.64IMFKK210 pKa = 10.38NGIRR214 pKa = 11.84FEE216 pKa = 4.09KK217 pKa = 9.76RR218 pKa = 11.84TGHH221 pKa = 5.25GTLKK225 pKa = 10.46ISLDD229 pKa = 3.68TPGITEE235 pKa = 3.83KK236 pKa = 10.96AIAEE240 pKa = 4.24GEE242 pKa = 4.09NMNLKK247 pKa = 10.68DD248 pKa = 4.07GLKK251 pKa = 10.33KK252 pKa = 10.36ALKK255 pKa = 10.26KK256 pKa = 10.61SGIYY260 pKa = 9.49KK261 pKa = 10.61ALALKK266 pKa = 10.59ADD268 pKa = 3.94INNPIWPKK276 pKa = 10.1MDD278 pKa = 3.74FF279 pKa = 3.61

Molecular weight: 31.35 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D3R1G5|A0A0D3R1G5_9RHAB G OS=Inhangapi virus OX=1620892 PE=4 SV=1
MM1 pKa = 7.6NITSRR6 pKa = 11.84INWQSVDD13 pKa = 3.23PSKK16 pKa = 10.45WFEE19 pKa = 4.24GIKK22 pKa = 10.71DD23 pKa = 3.61GANSFFSSLKK33 pKa = 10.65VVFQDD38 pKa = 2.91TKK40 pKa = 9.71YY41 pKa = 10.21WINLFFWLIVAILIMVIVLKK61 pKa = 10.31FSNYY65 pKa = 10.31LIGLINQCGACVKK78 pKa = 10.27MIGNCQCKK86 pKa = 9.83CKK88 pKa = 10.53KK89 pKa = 9.47KK90 pKa = 10.05AKK92 pKa = 9.9KK93 pKa = 9.19RR94 pKa = 11.84GKK96 pKa = 9.54IIKK99 pKa = 9.43INKK102 pKa = 8.78IYY104 pKa = 10.67NPRR107 pKa = 11.84NMM109 pKa = 4.28

Molecular weight: 12.66 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

3813

109

2104

635.5

72.85

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.436 ± 0.648

1.678 ± 0.318

5.953 ± 0.467

6.216 ± 0.544

3.855 ± 0.287

5.744 ± 0.138

2.229 ± 0.344

8.786 ± 0.717

7.815 ± 0.724

9.31 ± 0.605

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.016 ± 0.245

5.56 ± 0.402

4.878 ± 0.8

3.173 ± 0.262

4.485 ± 0.371

7.763 ± 0.257

5.612 ± 0.485

4.721 ± 0.544

1.836 ± 0.207

3.934 ± 0.378
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski