Bovine faeces associated smacovirus 3

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Bovismacovirus; Bovismacovirus bovas2

Average proteome isoelectric point is 5.89

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A161IB94|A0A161IB94_9VIRU Putative capsid protein OS=Bovine faeces associated smacovirus 3 OX=1843751 PE=4 SV=1
MM1 pKa = 7.31EE2 pKa = 5.87AFRR5 pKa = 11.84MVSVTLRR12 pKa = 11.84EE13 pKa = 4.16TYY15 pKa = 10.57DD16 pKa = 3.5LSTKK20 pKa = 8.55QGKK23 pKa = 6.68MTLIGIHH30 pKa = 6.54IPTSNIIQRR39 pKa = 11.84LYY41 pKa = 10.48PGFCEE46 pKa = 3.99QYY48 pKa = 9.9KK49 pKa = 8.73MCRR52 pKa = 11.84INYY55 pKa = 7.55QNVRR59 pKa = 11.84IEE61 pKa = 4.26SASRR65 pKa = 11.84LPLDD69 pKa = 3.71PAGVGVNEE77 pKa = 4.54EE78 pKa = 4.42GLVSPEE84 pKa = 4.31DD85 pKa = 3.56VFNPILYY92 pKa = 9.92KK93 pKa = 10.64AVSNQSLSNLEE104 pKa = 3.55YY105 pKa = 10.48RR106 pKa = 11.84IRR108 pKa = 11.84GLRR111 pKa = 11.84DD112 pKa = 2.94QEE114 pKa = 4.25LSVDD118 pKa = 4.07GEE120 pKa = 4.47SATASNEE127 pKa = 3.75NVTFLDD133 pKa = 3.92DD134 pKa = 3.93EE135 pKa = 5.03FNVYY139 pKa = 10.57YY140 pKa = 10.7SILSNTRR147 pKa = 11.84GWKK150 pKa = 8.69VAHH153 pKa = 6.23PQAGLSMRR161 pKa = 11.84KK162 pKa = 9.14LRR164 pKa = 11.84PLVFEE169 pKa = 4.15KK170 pKa = 10.3WFSEE174 pKa = 4.24GVNGVNDD181 pKa = 3.18FTIPVDD187 pKa = 3.73SSHH190 pKa = 7.7LEE192 pKa = 3.91GEE194 pKa = 4.5TPVNYY199 pKa = 9.4IGQMPDD205 pKa = 2.29EE206 pKa = 4.6AMRR209 pKa = 11.84GRR211 pKa = 11.84PHH213 pKa = 7.84AMPAFNTKK221 pKa = 10.23YY222 pKa = 9.76LTGVQDD228 pKa = 3.5GSGAGVGKK236 pKa = 9.37FQQNGMGDD244 pKa = 4.18GLPGNAQVSMPILPTIYY261 pKa = 9.6TGLILVPPSRR271 pKa = 11.84NTTLYY276 pKa = 9.58YY277 pKa = 10.66RR278 pKa = 11.84MVVEE282 pKa = 4.47TVVSFWGVQTMDD294 pKa = 4.31EE295 pKa = 4.08ITSFFNMNNRR305 pKa = 11.84TRR307 pKa = 11.84FPVYY311 pKa = 8.85WNDD314 pKa = 3.22YY315 pKa = 9.71RR316 pKa = 11.84SEE318 pKa = 4.1NKK320 pKa = 8.61DD321 pKa = 2.98TKK323 pKa = 10.57LTVDD327 pKa = 3.98EE328 pKa = 4.72DD329 pKa = 4.65TVSLSEE335 pKa = 4.19GADD338 pKa = 3.19LKK340 pKa = 11.24KK341 pKa = 10.78IMEE344 pKa = 4.32

Molecular weight: 38.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A161IB94|A0A161IB94_9VIRU Putative capsid protein OS=Bovine faeces associated smacovirus 3 OX=1843751 PE=4 SV=1
MM1 pKa = 7.5GKK3 pKa = 10.37YY4 pKa = 10.17SVTISADD11 pKa = 2.82LWKK14 pKa = 10.66EE15 pKa = 3.49RR16 pKa = 11.84DD17 pKa = 3.72VVRR20 pKa = 11.84LLDD23 pKa = 3.62MVDD26 pKa = 3.03LRR28 pKa = 11.84EE29 pKa = 4.01YY30 pKa = 10.88YY31 pKa = 9.69IGRR34 pKa = 11.84EE35 pKa = 3.79IGKK38 pKa = 9.87GGYY41 pKa = 8.2HH42 pKa = 7.3HH43 pKa = 6.56YY44 pKa = 10.48QCAIDD49 pKa = 4.26CGGDD53 pKa = 3.3LEE55 pKa = 4.86RR56 pKa = 11.84FNGQHH61 pKa = 4.76QLGWHH66 pKa = 6.5IEE68 pKa = 4.26DD69 pKa = 3.85CASWDD74 pKa = 3.37KK75 pKa = 11.02LVRR78 pKa = 11.84YY79 pKa = 8.65CRR81 pKa = 11.84KK82 pKa = 10.24GGDD85 pKa = 3.21YY86 pKa = 10.36RR87 pKa = 11.84YY88 pKa = 9.89IGDD91 pKa = 4.1SIEE94 pKa = 4.09EE95 pKa = 3.49QSYY98 pKa = 10.28RR99 pKa = 11.84SRR101 pKa = 11.84GTTAVGHH108 pKa = 6.54TIDD111 pKa = 3.74THH113 pKa = 7.07LKK115 pKa = 8.72KK116 pKa = 10.89QNDD119 pKa = 4.0RR120 pKa = 11.84QISICVDD127 pKa = 3.27TKK129 pKa = 11.0GGSGKK134 pKa = 6.63TTHH137 pKa = 6.72GYY139 pKa = 10.11DD140 pKa = 3.11RR141 pKa = 11.84SRR143 pKa = 11.84TGEE146 pKa = 4.06YY147 pKa = 10.36FVVPRR152 pKa = 11.84NAEE155 pKa = 3.9TPTRR159 pKa = 11.84IMDD162 pKa = 3.9YY163 pKa = 11.27VAMNYY168 pKa = 10.42DD169 pKa = 3.94NEE171 pKa = 4.18PVIWIDD177 pKa = 3.56LPRR180 pKa = 11.84TRR182 pKa = 11.84KK183 pKa = 8.98IDD185 pKa = 3.4KK186 pKa = 10.46GLATILEE193 pKa = 4.18DD194 pKa = 3.59MKK196 pKa = 11.41DD197 pKa = 3.52GLIYY201 pKa = 9.39SAKK204 pKa = 9.78YY205 pKa = 8.67EE206 pKa = 4.17GQVRR210 pKa = 11.84HH211 pKa = 5.56IKK213 pKa = 9.54GVKK216 pKa = 9.55VLVTTNHH223 pKa = 6.23YY224 pKa = 9.91IEE226 pKa = 4.71KK227 pKa = 9.52PAYY230 pKa = 9.0KK231 pKa = 10.22LLSADD236 pKa = 3.23RR237 pKa = 11.84WDD239 pKa = 3.9VFTPPTKK246 pKa = 10.75AGDD249 pKa = 3.8SRR251 pKa = 11.84DD252 pKa = 3.77GNTGLSPLGGG262 pKa = 3.52

Molecular weight: 29.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

606

262

344

303.0

34.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.125 ± 0.044

1.155 ± 0.453

6.931 ± 1.342

5.941 ± 0.589

2.805 ± 0.999

9.076 ± 0.97

2.145 ± 0.776

5.776 ± 0.659

5.116 ± 1.056

7.261 ± 0.465

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.135 ± 0.738

4.95 ± 1.372

4.455 ± 0.844

3.3 ± 0.378

6.436 ± 0.721

6.436 ± 0.887

6.766 ± 0.063

7.426 ± 0.794

1.485 ± 0.255

5.281 ± 0.727
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski