Caulobacter sp. 17J65-9

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter; unclassified Caulobacter

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4292 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6B3UKC1|A0A6B3UKC1_9CAUL Uncharacterized protein (Fragment) OS=Caulobacter sp. 17J65-9 OX=2709382 GN=G3573_14915 PE=4 SV=1
MM1 pKa = 7.29SSRR4 pKa = 11.84RR5 pKa = 11.84GVLLLGSALGVSIAVLAAAVPNRR28 pKa = 11.84ALAADD33 pKa = 3.59EE34 pKa = 4.88CGAVPAGATPTVTCTVADD52 pKa = 3.7SPYY55 pKa = 10.6PGVQYY60 pKa = 11.08DD61 pKa = 3.9GVEE64 pKa = 4.16DD65 pKa = 3.88LTVVIQPDD73 pKa = 3.73VTVEE77 pKa = 3.75GLVRR81 pKa = 11.84VTGTGDD87 pKa = 3.54LAVNAQAGSSIDD99 pKa = 3.6NPTGAGIQVTSSGTGSVTAASVSAGYY125 pKa = 10.88GDD127 pKa = 4.07GVSVSGEE134 pKa = 3.52AGATVNVGTVSGDD147 pKa = 3.12WTGVAASSNLGSVTVTSTSVTAVEE171 pKa = 4.37GRR173 pKa = 11.84GIFAWARR180 pKa = 11.84AEE182 pKa = 4.09GEE184 pKa = 4.51TINITSGTVEE194 pKa = 4.38SYY196 pKa = 11.51DD197 pKa = 3.5EE198 pKa = 4.94GIYY201 pKa = 10.29AYY203 pKa = 10.42SGEE206 pKa = 4.35GGSADD211 pKa = 3.48VVVDD215 pKa = 3.71SATVTTTRR223 pKa = 11.84SSWATGIVAAASHH236 pKa = 6.8GDD238 pKa = 3.42VTVTSGSVTTAGDD251 pKa = 3.61YY252 pKa = 11.29SEE254 pKa = 5.82GILVKK259 pKa = 10.3AAEE262 pKa = 4.48GEE264 pKa = 4.62VYY266 pKa = 10.35VQSDD270 pKa = 4.15TVHH273 pKa = 5.97TAGDD277 pKa = 3.88YY278 pKa = 8.64STGIKK283 pKa = 10.28VEE285 pKa = 4.32GGLGPVEE292 pKa = 4.07LHH294 pKa = 6.56SGSITTDD301 pKa = 3.13GASASGIDD309 pKa = 3.64VYY311 pKa = 8.93TTSGAVTVTSDD322 pKa = 4.07EE323 pKa = 3.93IALNGGRR330 pKa = 11.84AVEE333 pKa = 4.31TTYY336 pKa = 11.49GEE338 pKa = 4.26YY339 pKa = 10.96GSYY342 pKa = 7.09TTYY345 pKa = 10.62GRR347 pKa = 11.84RR348 pKa = 11.84PVGIDD353 pKa = 3.09VRR355 pKa = 11.84STDD358 pKa = 3.34GAVTITSGDD367 pKa = 3.17ISVTDD372 pKa = 4.66GIGISVEE379 pKa = 3.99TAGNISITSTGTLLVADD396 pKa = 4.63GEE398 pKa = 4.79RR399 pKa = 11.84NGGYY403 pKa = 10.01GYY405 pKa = 11.05SSGIYY410 pKa = 9.82FDD412 pKa = 4.18SQNSGEE418 pKa = 4.4GEE420 pKa = 3.91PGGTVQVVNEE430 pKa = 4.0GRR432 pKa = 11.84IEE434 pKa = 3.74IHH436 pKa = 5.75GSNRR440 pKa = 11.84NGIYY444 pKa = 10.4GYY446 pKa = 10.95GSGSAVSITNAGEE459 pKa = 3.98IVGDD463 pKa = 3.81RR464 pKa = 11.84DD465 pKa = 3.28TTAIRR470 pKa = 11.84VHH472 pKa = 6.93NEE474 pKa = 3.42DD475 pKa = 3.58GGALSVTNQAGASIHH490 pKa = 6.96LYY492 pKa = 9.02DD493 pKa = 3.97TYY495 pKa = 11.13STGIHH500 pKa = 6.68AGTDD504 pKa = 3.22EE505 pKa = 4.51GALTITNAGSIVTEE519 pKa = 4.13GDD521 pKa = 3.3YY522 pKa = 11.35SSAITFHH529 pKa = 7.52SEE531 pKa = 3.46AGTVTLNSTGTIEE544 pKa = 4.02TSGYY548 pKa = 10.36GSGAIYY554 pKa = 9.8GHH556 pKa = 6.45SYY558 pKa = 11.08DD559 pKa = 4.15GDD561 pKa = 3.91VLVDD565 pKa = 3.45VASVHH570 pKa = 6.07VGGGSASGIDD580 pKa = 3.48VWSEE584 pKa = 3.92SGSVRR589 pKa = 11.84VNADD593 pKa = 3.37LVVTGSSCSEE603 pKa = 4.04GEE605 pKa = 4.38GCSGEE610 pKa = 4.1GDD612 pKa = 3.92SVGVSASSGTGNVTIDD628 pKa = 3.49VGSVTTGDD636 pKa = 3.9DD637 pKa = 3.61YY638 pKa = 12.01AVGVSAGMYY647 pKa = 10.43GGFLGDD653 pKa = 3.63AYY655 pKa = 10.79SGEE658 pKa = 4.21GEE660 pKa = 4.59YY661 pKa = 11.09VFGDD665 pKa = 3.39IQVTADD671 pKa = 3.29RR672 pKa = 11.84VTTSGDD678 pKa = 2.81WAAGIQVISGRR689 pKa = 11.84DD690 pKa = 3.6EE691 pKa = 4.6YY692 pKa = 10.94ISGPFGPPPIVRR704 pKa = 11.84TGAVDD709 pKa = 3.59IDD711 pKa = 3.6AGTIVTHH718 pKa = 6.6GSGSAGISVAAGSAEE733 pKa = 3.94DD734 pKa = 4.85VLGFWSGPMLGGEE747 pKa = 4.13GGVNPFALVMGPHH760 pKa = 7.1FGTTGDD766 pKa = 3.19VDD768 pKa = 3.75VDD770 pKa = 4.21VVSVSTDD777 pKa = 2.52GDD779 pKa = 4.04GAVGVYY785 pKa = 10.16ASSGFTLGFYY795 pKa = 11.29GEE797 pKa = 4.53GEE799 pKa = 4.26YY800 pKa = 11.14GGAEE804 pKa = 3.95PGGDD808 pKa = 3.48VIVTSGAIEE817 pKa = 4.0TAGDD821 pKa = 3.64GAIGIVARR829 pKa = 11.84GVAGGVTIDD838 pKa = 3.53SGTIEE843 pKa = 4.11TSGDD847 pKa = 3.58YY848 pKa = 11.05ASGIVANNGGVVFTRR863 pKa = 11.84VEE865 pKa = 4.09IEE867 pKa = 3.88PEE869 pKa = 4.24FYY871 pKa = 8.38TTVPSFVSGGLIDD884 pKa = 3.74VTSDD888 pKa = 3.17KK889 pKa = 10.61IYY891 pKa = 10.73TSGEE895 pKa = 3.81SSAGITAVGMGGGVTIDD912 pKa = 3.66SGIIDD917 pKa = 3.44TWGAYY922 pKa = 10.33ANGIQVMAIGGDD934 pKa = 3.46VSVDD938 pKa = 3.15STRR941 pKa = 11.84IIARR945 pKa = 11.84GDD947 pKa = 3.13RR948 pKa = 11.84SGGILINTANLDD960 pKa = 3.72SFFGEE965 pKa = 4.52GEE967 pKa = 4.03YY968 pKa = 11.08GATFVAGDD976 pKa = 3.19IHH978 pKa = 5.87VTSGTIRR985 pKa = 11.84TEE987 pKa = 3.98GGSADD992 pKa = 4.24GIAVFSGYY1000 pKa = 11.25AFFGEE1005 pKa = 4.63GEE1007 pKa = 4.26YY1008 pKa = 11.21GGGDD1012 pKa = 3.34VDD1014 pKa = 3.56ITSGNITTLGDD1025 pKa = 3.44DD1026 pKa = 3.5SAGIRR1031 pKa = 11.84VTAYY1035 pKa = 10.22GRR1037 pKa = 11.84YY1038 pKa = 7.93TYY1040 pKa = 11.23GDD1042 pKa = 3.62DD1043 pKa = 3.87EE1044 pKa = 4.38SWEE1047 pKa = 3.98IEE1049 pKa = 3.96GDD1051 pKa = 3.89VTVHH1055 pKa = 6.04SGAVITSGDD1064 pKa = 3.74YY1065 pKa = 10.56SDD1067 pKa = 5.59GIVVEE1072 pKa = 4.28ATLGDD1077 pKa = 3.91VNVTANATATSGDD1090 pKa = 3.51SSRR1093 pKa = 11.84GIDD1096 pKa = 3.05IDD1098 pKa = 4.02ADD1100 pKa = 3.68NGDD1103 pKa = 3.76VVVNATAVTTTGGRR1117 pKa = 11.84KK1118 pKa = 9.37ANEE1121 pKa = 3.42VSYY1124 pKa = 10.67YY1125 pKa = 10.95DD1126 pKa = 4.06SYY1128 pKa = 10.51TEE1130 pKa = 3.51SWVYY1134 pKa = 7.95VTEE1137 pKa = 4.2YY1138 pKa = 10.92GHH1140 pKa = 7.07ASDD1143 pKa = 5.49GIRR1146 pKa = 11.84VEE1148 pKa = 4.24TEE1150 pKa = 3.79YY1151 pKa = 11.78GDD1153 pKa = 3.7VTINAQNVTVSGDD1166 pKa = 3.12QATGVLVDD1174 pKa = 4.12SEE1176 pKa = 4.52YY1177 pKa = 11.66GDD1179 pKa = 3.41VKK1181 pKa = 11.25LNLGSVRR1188 pKa = 11.84AQGEE1192 pKa = 3.99AGDD1195 pKa = 4.14AVHH1198 pKa = 6.71VYY1200 pKa = 10.19AYY1202 pKa = 10.14EE1203 pKa = 4.09GDD1205 pKa = 3.23IGVNISGQVTSANGAGVHH1223 pKa = 6.39AYY1225 pKa = 9.8SYY1227 pKa = 11.15YY1228 pKa = 10.93GGVDD1232 pKa = 3.27VKK1234 pKa = 10.68LAAGSRR1240 pKa = 11.84VQGGTVGIYY1249 pKa = 9.98AYY1251 pKa = 10.48SDD1253 pKa = 3.11TGTTITINGTVSAASGLAIDD1273 pKa = 4.46VKK1275 pKa = 11.19GLGAATIHH1283 pKa = 6.03NLSNTVIGGVSLTDD1297 pKa = 3.76NDD1299 pKa = 5.06DD1300 pKa = 4.28LFDD1303 pKa = 3.75NTGTFQATIDD1313 pKa = 3.77SQFGEE1318 pKa = 4.62GVDD1321 pKa = 4.59LFDD1324 pKa = 4.51NTGLLQILPGSSTPGTIVFQGLEE1347 pKa = 4.1TFDD1350 pKa = 3.55NAGVVDD1356 pKa = 5.02LANGHH1361 pKa = 6.61AGDD1364 pKa = 4.29VFDD1367 pKa = 6.09LSSATWNGEE1376 pKa = 3.82AGSTLEE1382 pKa = 4.67LDD1384 pKa = 3.55ISGSGSDD1391 pKa = 3.53TLLVDD1396 pKa = 4.44DD1397 pKa = 4.9ATGHH1401 pKa = 4.52TTIVLSGAGGGIGQALEE1418 pKa = 4.37LVVSNSDD1425 pKa = 3.15EE1426 pKa = 4.25TGNEE1430 pKa = 3.69FTLDD1434 pKa = 3.34GDD1436 pKa = 3.78TGFVKK1441 pKa = 10.81FIMDD1445 pKa = 3.87FDD1447 pKa = 4.51AATDD1451 pKa = 3.21TWSAVGTADD1460 pKa = 3.69TEE1462 pKa = 4.33VFEE1465 pKa = 5.03PGRR1468 pKa = 11.84FLTGAQNFWNEE1479 pKa = 4.02TGDD1482 pKa = 3.2AWSARR1487 pKa = 11.84MTEE1490 pKa = 4.01LRR1492 pKa = 11.84DD1493 pKa = 3.26IGSDD1497 pKa = 3.09RR1498 pKa = 11.84GQGAQGWVQAFGGEE1512 pKa = 4.06QSEE1515 pKa = 4.46DD1516 pKa = 3.07RR1517 pKa = 11.84GTEE1520 pKa = 3.64RR1521 pKa = 11.84FTVGGAPSDD1530 pKa = 3.67VNLAYY1535 pKa = 9.43EE1536 pKa = 3.7QSYY1539 pKa = 10.84RR1540 pKa = 11.84GLQTGVDD1547 pKa = 3.72WSTGDD1552 pKa = 3.27TVLGVTIGFGDD1563 pKa = 3.65SEE1565 pKa = 4.25QRR1567 pKa = 11.84MASGNSAEE1575 pKa = 4.0FGGFNFGAYY1584 pKa = 9.89GGWNPGSFFVNGLVKK1599 pKa = 10.54ADD1601 pKa = 3.59VYY1603 pKa = 10.02KK1604 pKa = 10.68TRR1606 pKa = 11.84LGLRR1610 pKa = 11.84TLQASEE1616 pKa = 4.25EE1617 pKa = 4.24VDD1619 pKa = 3.16GRR1621 pKa = 11.84TWGAKK1626 pKa = 9.9AEE1628 pKa = 4.32AGWRR1632 pKa = 11.84VGGDD1636 pKa = 2.75GWFFEE1641 pKa = 4.61PSARR1645 pKa = 11.84LSWTDD1650 pKa = 2.53VDD1652 pKa = 3.68MDD1654 pKa = 3.98GFSAAGGTVEE1664 pKa = 5.76FGDD1667 pKa = 3.82ASSLLGEE1674 pKa = 4.25AGARR1678 pKa = 11.84FGTHH1682 pKa = 4.32WTNGVVDD1689 pKa = 4.81LVPYY1693 pKa = 10.6LGLFAVDD1700 pKa = 4.49EE1701 pKa = 4.59FDD1703 pKa = 5.96GEE1705 pKa = 4.27NQTAFSIAGDD1715 pKa = 3.79TFRR1718 pKa = 11.84LTDD1721 pKa = 3.61EE1722 pKa = 4.25AAGAHH1727 pKa = 5.55GRR1729 pKa = 11.84VDD1731 pKa = 4.27FGVTAVTFHH1740 pKa = 6.28GLEE1743 pKa = 4.16GFVKK1747 pKa = 10.91GEE1749 pKa = 3.93ALVGGDD1755 pKa = 3.53AEE1757 pKa = 5.05GYY1759 pKa = 8.32SARR1762 pKa = 11.84LGVRR1766 pKa = 11.84WRR1768 pKa = 11.84WW1769 pKa = 3.03

Molecular weight: 178.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6B3USG0|A0A6B3USG0_9CAUL Alpha/beta hydrolase OS=Caulobacter sp. 17J65-9 OX=2709382 GN=G3573_16210 PE=4 SV=1
AA1 pKa = 7.78SSAQSRR7 pKa = 11.84SAQARR12 pKa = 11.84GTRR15 pKa = 11.84RR16 pKa = 11.84WPPVIALSAAAAVSAGLWVAVVAAVRR42 pKa = 11.84ALLL45 pKa = 3.85

Molecular weight: 4.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4292

0

4292

1247758

35

2282

290.7

31.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.464 ± 0.058

0.745 ± 0.014

5.869 ± 0.035

5.817 ± 0.04

3.554 ± 0.022

9.155 ± 0.051

1.737 ± 0.017

3.584 ± 0.022

3.063 ± 0.034

9.963 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.091 ± 0.017

2.134 ± 0.024

5.529 ± 0.032

2.975 ± 0.022

7.591 ± 0.039

4.786 ± 0.03

5.123 ± 0.042

8.106 ± 0.032

1.566 ± 0.017

2.146 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski