Torrubiella hemipterigena

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Torrubiella

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11466 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1T6B4|A0A0A1T6B4_9HYPO Uncharacterized protein OS=Torrubiella hemipterigena OX=1531966 GN=VHEMI01956 PE=4 SV=1
MM1 pKa = 7.83PSWQDD6 pKa = 3.34LPTVRR11 pKa = 11.84SDD13 pKa = 4.6DD14 pKa = 4.66DD15 pKa = 3.5TDD17 pKa = 3.68QDD19 pKa = 3.93VNAVDD24 pKa = 4.39NRR26 pKa = 11.84AQFPIEE32 pKa = 4.15TFGPDD37 pKa = 3.05NTGGISNDD45 pKa = 3.05LTVFSAHH52 pKa = 6.46VDD54 pKa = 3.93FDD56 pKa = 4.44LDD58 pKa = 3.57ATHH61 pKa = 7.37LEE63 pKa = 4.09FLGPEE68 pKa = 4.09FVVVEE73 pKa = 4.21MPDD76 pKa = 3.69YY77 pKa = 10.73PPHH80 pKa = 6.12QDD82 pKa = 2.37GRR84 pKa = 11.84YY85 pKa = 7.19YY86 pKa = 10.93CRR88 pKa = 11.84DD89 pKa = 3.54AEE91 pKa = 4.36CDD93 pKa = 3.54PRR95 pKa = 11.84PSFTTGSALKK105 pKa = 10.53YY106 pKa = 8.76YY107 pKa = 10.6DD108 pKa = 4.69PYY110 pKa = 11.88SPMM113 pKa = 4.38

Molecular weight: 12.76 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1T084|A0A0A1T084_9HYPO FAD-binding PCMH-type domain-containing protein OS=Torrubiella hemipterigena OX=1531966 GN=VHEMI04053 PE=3 SV=1
MM1 pKa = 7.67HH2 pKa = 7.42ATQLHH7 pKa = 6.05KK8 pKa = 10.36MQALTRR14 pKa = 11.84AARR17 pKa = 11.84PVLRR21 pKa = 11.84TTLPIRR27 pKa = 11.84TFTTMTTPIRR37 pKa = 11.84PSLSASAIRR46 pKa = 11.84RR47 pKa = 11.84PTSLLPSLLTPPPATTTAAAADD69 pKa = 4.03VVSTSAISAHH79 pKa = 6.47PAFAGAQMRR88 pKa = 11.84FGPRR92 pKa = 11.84NTMTGATRR100 pKa = 11.84LVQKK104 pKa = 10.08RR105 pKa = 11.84RR106 pKa = 11.84HH107 pKa = 4.96GFLYY111 pKa = 10.42RR112 pKa = 11.84MRR114 pKa = 11.84SRR116 pKa = 11.84TGRR119 pKa = 11.84KK120 pKa = 8.73IILRR124 pKa = 11.84RR125 pKa = 11.84KK126 pKa = 7.15TKK128 pKa = 9.84GRR130 pKa = 11.84RR131 pKa = 11.84HH132 pKa = 5.06VAWW135 pKa = 4.03

Molecular weight: 14.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10771

695

11466

5553574

50

7027

484.4

53.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.158 ± 0.022

1.274 ± 0.009

5.903 ± 0.018

5.828 ± 0.022

3.749 ± 0.013

6.742 ± 0.02

2.318 ± 0.01

5.097 ± 0.014

5.003 ± 0.018

8.82 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.349 ± 0.009

3.831 ± 0.011

5.717 ± 0.023

4.037 ± 0.016

5.676 ± 0.018

8.028 ± 0.025

6.082 ± 0.015

6.127 ± 0.016

1.455 ± 0.007

2.808 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski