Coriobacteriaceae bacterium EMTCatB1

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; unclassified Coriobacteriaceae

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1659 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1V1RG50|A0A1V1RG50_9ACTN ATPase related to the helicase subunit of the Holliday junction resolvase OS=Coriobacteriaceae bacterium EMTCatB1 OX=1927122 GN=1c0252 PE=3 SV=1
MM1 pKa = 7.58RR2 pKa = 11.84PARR5 pKa = 11.84RR6 pKa = 11.84PLSSKK11 pKa = 10.09EE12 pKa = 3.79AVLRR16 pKa = 11.84GADD19 pKa = 3.26AVYY22 pKa = 10.73DD23 pKa = 3.87GGGATGWFDD32 pKa = 3.43VSPRR36 pKa = 11.84GHH38 pKa = 6.39NSAAAWDD45 pKa = 3.83AGYY48 pKa = 8.73TGAGVKK54 pKa = 9.85IAVADD59 pKa = 4.16DD60 pKa = 4.1SVDD63 pKa = 3.81FAHH66 pKa = 7.82PDD68 pKa = 3.36LQGTQSVVSDD78 pKa = 4.11PASPYY83 pKa = 10.11YY84 pKa = 10.36GWPEE88 pKa = 3.74AFDD91 pKa = 4.51PYY93 pKa = 11.18SALLYY98 pKa = 10.59AYY100 pKa = 9.39DD101 pKa = 3.62VYY103 pKa = 11.64YY104 pKa = 9.19GTSYY108 pKa = 10.25VANGQTWWSDD118 pKa = 2.81TSATITEE125 pKa = 4.65ADD127 pKa = 3.51PTFDD131 pKa = 2.84GKK133 pKa = 9.09TFVTPGTSLSGTYY146 pKa = 10.03HH147 pKa = 7.22IGYY150 pKa = 9.38LWDD153 pKa = 3.64EE154 pKa = 4.3NLYY157 pKa = 11.29AWMSDD162 pKa = 2.15WSEE165 pKa = 4.19YY166 pKa = 8.66PTVLVADD173 pKa = 3.87EE174 pKa = 4.45TTPGVYY180 pKa = 9.07DD181 pKa = 3.4TVYY184 pKa = 10.32VDD186 pKa = 2.63VWMDD190 pKa = 3.24YY191 pKa = 11.13DD192 pKa = 4.42FSYY195 pKa = 10.95EE196 pKa = 4.16KK197 pKa = 10.32PCTIDD202 pKa = 3.97SPISYY207 pKa = 10.36LDD209 pKa = 3.47YY210 pKa = 10.37WDD212 pKa = 5.52SEE214 pKa = 4.28ADD216 pKa = 3.62DD217 pKa = 4.57YY218 pKa = 12.18GPDD221 pKa = 3.61GYY223 pKa = 11.63ADD225 pKa = 3.81LSGGTVYY232 pKa = 10.42WISDD236 pKa = 3.97GEE238 pKa = 4.2HH239 pKa = 5.65QPPGFEE245 pKa = 4.04FLINGSDD252 pKa = 3.56PSAPVPGNGEE262 pKa = 4.19LVCFMGALNFDD273 pKa = 4.37EE274 pKa = 4.87NHH276 pKa = 5.82GTLCASNVVGQGMTDD291 pKa = 3.67GPSDD295 pKa = 4.79PIMDD299 pKa = 4.87DD300 pKa = 3.18GVYY303 pKa = 10.4PPFKK307 pKa = 9.91TPTGGGDD314 pKa = 3.87GIVQGAARR322 pKa = 11.84DD323 pKa = 3.95SKK325 pKa = 11.31VVAFSDD331 pKa = 3.64IYY333 pKa = 10.8WNFFTSTLLAYY344 pKa = 10.16DD345 pKa = 3.96YY346 pKa = 10.39ATFGADD352 pKa = 3.29MEE354 pKa = 5.33AGTGDD359 pKa = 4.05EE360 pKa = 4.12IQIVSNSYY368 pKa = 10.77GDD370 pKa = 3.8SAVDD374 pKa = 3.3ADD376 pKa = 3.3EE377 pKa = 4.11WDD379 pKa = 3.47YY380 pKa = 11.62HH381 pKa = 5.95SRR383 pKa = 11.84YY384 pKa = 8.12VTALNTYY391 pKa = 8.14VNSMTSFLFSTGNGAPGYY409 pKa = 7.73GTNAPPTPSTGIGIGASTQLGACGGWDD436 pKa = 3.62SIYY439 pKa = 10.98DD440 pKa = 3.78ADD442 pKa = 3.88QVTVGDD448 pKa = 4.02VIPWSNRR455 pKa = 11.84GPSAMGHH462 pKa = 6.81AGPAVVADD470 pKa = 4.31GAYY473 pKa = 10.52SSGAMALNQGAWDD486 pKa = 4.14GWRR489 pKa = 11.84SWIVWGGTSRR499 pKa = 11.84SCPVAAGNMALIYY512 pKa = 10.5DD513 pKa = 4.17AFKK516 pKa = 10.94QRR518 pKa = 11.84FGRR521 pKa = 11.84YY522 pKa = 4.06PTYY525 pKa = 9.2WQARR529 pKa = 11.84NYY531 pKa = 10.7LMAGARR537 pKa = 11.84DD538 pKa = 3.99LSYY541 pKa = 11.52DD542 pKa = 3.69PAVQGAGMVDD552 pKa = 3.16AKK554 pKa = 10.85KK555 pKa = 10.84SIDD558 pKa = 3.86IITGDD563 pKa = 3.59GGIEE567 pKa = 3.7ISPSQWYY574 pKa = 8.45PGDD577 pKa = 3.79YY578 pKa = 10.18RR579 pKa = 11.84GEE581 pKa = 4.36TYY583 pKa = 11.02ASFPSVVYY591 pKa = 10.12PGQTYY596 pKa = 10.81DD597 pKa = 3.55GTLQVDD603 pKa = 3.54NRR605 pKa = 11.84STTDD609 pKa = 2.56SDD611 pKa = 4.43VNVTVSDD618 pKa = 3.65KK619 pKa = 10.77TLEE622 pKa = 4.14PVAASSMLVEE632 pKa = 4.53LDD634 pKa = 3.4GSKK637 pKa = 10.57EE638 pKa = 3.95SPYY641 pKa = 11.3DD642 pKa = 3.48FNRR645 pKa = 11.84PDD647 pKa = 3.28WLSDD651 pKa = 3.18LSALVRR657 pKa = 11.84DD658 pKa = 4.18YY659 pKa = 11.52DD660 pKa = 3.96PDD662 pKa = 3.88LMVVRR667 pKa = 11.84TATPFADD674 pKa = 4.92FAPTGAFNTSGSTHH688 pKa = 5.12NTTRR692 pKa = 11.84LLAYY696 pKa = 9.65DD697 pKa = 4.17WKK699 pKa = 11.1DD700 pKa = 3.29QDD702 pKa = 3.69EE703 pKa = 5.83DD704 pKa = 4.08GVLWNDD710 pKa = 3.23GDD712 pKa = 3.91GDD714 pKa = 4.49GYY716 pKa = 11.33VDD718 pKa = 4.33PGEE721 pKa = 4.29MDD723 pKa = 2.73SGEE726 pKa = 4.19YY727 pKa = 9.64MRR729 pKa = 11.84FTYY732 pKa = 10.84SNNFANSHH740 pKa = 6.44EE741 pKa = 4.13IRR743 pKa = 11.84VQNPVEE749 pKa = 4.05RR750 pKa = 11.84MHH752 pKa = 7.56DD753 pKa = 4.08GIFLGLQHH761 pKa = 6.7NNDD764 pKa = 3.03ATADD768 pKa = 3.7KK769 pKa = 9.29TVSVQIVVEE778 pKa = 4.55LYY780 pKa = 10.73KK781 pKa = 10.53EE782 pKa = 4.46TDD784 pKa = 3.71HH785 pKa = 6.96PWLSSSMEE793 pKa = 4.04GSPHH797 pKa = 7.78LLMGGSSMQVPVRR810 pKa = 11.84LTVPEE815 pKa = 4.12DD816 pKa = 3.51AKK818 pKa = 10.66PGVYY822 pKa = 9.83EE823 pKa = 4.34GEE825 pKa = 4.36FVFTTDD831 pKa = 4.47RR832 pKa = 11.84GGDD835 pKa = 3.52LYY837 pKa = 10.9TSVVPVHH844 pKa = 5.9ITVASDD850 pKa = 3.51SPNFAFGDD858 pKa = 3.58VGMVEE863 pKa = 4.17PRR865 pKa = 11.84GLRR868 pKa = 11.84PTGLGPADD876 pKa = 4.62PSPLLPNYY884 pKa = 9.83QLFGGQSWNWRR895 pKa = 11.84AEE897 pKa = 4.05SGDD900 pKa = 3.0WRR902 pKa = 11.84FYY904 pKa = 10.51FADD907 pKa = 3.85VKK909 pKa = 11.22DD910 pKa = 4.47EE911 pKa = 4.21EE912 pKa = 4.68PLPAGATWLVKK923 pKa = 7.34TTWPDD928 pKa = 2.57SGQPVDD934 pKa = 3.8TDD936 pKa = 3.22IDD938 pKa = 3.83TLLYY942 pKa = 11.0GPVDD946 pKa = 4.71DD947 pKa = 5.5GWSSMDD953 pKa = 3.48PGVFGPHH960 pKa = 5.31GMEE963 pKa = 4.2LKK965 pKa = 10.73GGSSNTNIGSGIWLWQTTTGTTEE988 pKa = 3.64EE989 pKa = 4.51WVAGPLEE996 pKa = 4.58RR997 pKa = 11.84GLNEE1001 pKa = 3.75IMLHH1005 pKa = 4.72SVVWSGEE1012 pKa = 3.82SWRR1015 pKa = 11.84EE1016 pKa = 3.86PVSGEE1021 pKa = 3.87AGVVGVDD1028 pKa = 3.46PSSIDD1033 pKa = 3.31VCDD1036 pKa = 3.68SAGSGSVPLQFTTTMDD1052 pKa = 3.98LNGLASEE1059 pKa = 4.81SYY1061 pKa = 9.42GVTRR1065 pKa = 11.84RR1066 pKa = 11.84LHH1068 pKa = 5.89YY1069 pKa = 9.39PAEE1072 pKa = 4.69SISQDD1077 pKa = 2.64EE1078 pKa = 4.18DD1079 pKa = 3.98VYY1081 pKa = 11.83YY1082 pKa = 10.86DD1083 pKa = 4.36LEE1085 pKa = 4.88LSGAAYY1091 pKa = 10.78LDD1093 pKa = 3.75VSISAAGGSDD1103 pKa = 3.43LDD1105 pKa = 5.15LYY1107 pKa = 9.13VWWWDD1112 pKa = 3.32GSSWQLVGASEE1123 pKa = 4.1TATGDD1128 pKa = 3.02EE1129 pKa = 4.91HH1130 pKa = 8.99VRR1132 pKa = 11.84IDD1134 pKa = 3.55QPADD1138 pKa = 2.82GSYY1141 pKa = 10.56VVDD1144 pKa = 3.88VYY1146 pKa = 11.24GYY1148 pKa = 9.88SVSGTDD1154 pKa = 3.07TFEE1157 pKa = 3.82ITASYY1162 pKa = 10.62PMGDD1166 pKa = 3.73DD1167 pKa = 3.41VTVTGLPAGPLVAGQVVPMSVDD1189 pKa = 2.69WTKK1192 pKa = 11.0YY1193 pKa = 10.31RR1194 pKa = 11.84GDD1196 pKa = 3.55LPDD1199 pKa = 4.08RR1200 pKa = 11.84EE1201 pKa = 4.47GVYY1204 pKa = 10.52EE1205 pKa = 4.08GVVYY1209 pKa = 10.58LGPTEE1214 pKa = 4.19APRR1217 pKa = 11.84AIAIPFEE1224 pKa = 3.84LSYY1227 pKa = 10.71PFEE1230 pKa = 4.47VEE1232 pKa = 4.0QYY1234 pKa = 9.54TPNPSQPAMSPTTAIEE1250 pKa = 3.88IQFSKK1255 pKa = 10.88RR1256 pKa = 11.84LDD1258 pKa = 3.54EE1259 pKa = 5.53DD1260 pKa = 4.13SIGDD1264 pKa = 3.7GTFTLTDD1271 pKa = 3.55GTEE1274 pKa = 4.23EE1275 pKa = 4.01IPLDD1279 pKa = 3.7VSADD1283 pKa = 3.44AEE1285 pKa = 4.47TGHH1288 pKa = 6.79VVLTPQDD1295 pKa = 3.6MLKK1298 pKa = 10.65SSTEE1302 pKa = 3.79YY1303 pKa = 10.7LVEE1306 pKa = 4.68IDD1308 pKa = 4.59GLLSRR1313 pKa = 11.84DD1314 pKa = 3.26GDD1316 pKa = 4.12EE1317 pKa = 5.63LSTALPFSTTDD1328 pKa = 3.66AIVRR1332 pKa = 11.84AMGDD1336 pKa = 3.23TRR1338 pKa = 11.84YY1339 pKa = 8.79DD1340 pKa = 3.24TAVAVSQQSFDD1351 pKa = 3.36AAEE1354 pKa = 4.15AVVLATGEE1362 pKa = 4.28KK1363 pKa = 10.63FPDD1366 pKa = 3.55ALSASGLAGQVKK1378 pKa = 10.44GPVLLTKK1385 pKa = 10.09PDD1387 pKa = 3.5TLLPQVRR1394 pKa = 11.84DD1395 pKa = 3.85EE1396 pKa = 4.1IARR1399 pKa = 11.84LGATKK1404 pKa = 10.37VYY1406 pKa = 10.7LIGGTGALSSNVASAVDD1423 pKa = 3.66ALPGVSIEE1431 pKa = 4.25RR1432 pKa = 11.84VQGADD1437 pKa = 3.15RR1438 pKa = 11.84YY1439 pKa = 8.89ATAAEE1444 pKa = 4.34VARR1447 pKa = 11.84KK1448 pKa = 9.02IAALRR1453 pKa = 11.84GSALSDD1459 pKa = 3.18AFLVRR1464 pKa = 11.84GDD1466 pKa = 3.96EE1467 pKa = 4.31YY1468 pKa = 11.53ADD1470 pKa = 3.59GVAVSPYY1477 pKa = 10.31AYY1479 pKa = 9.32RR1480 pKa = 11.84QAMPVLLTMPNDD1492 pKa = 3.54LPAVTRR1498 pKa = 11.84SALSDD1503 pKa = 3.59LSVSDD1508 pKa = 3.09VWIAGGVGAVSNRR1521 pKa = 11.84VVGQLPSGTTSHH1533 pKa = 6.83RR1534 pKa = 11.84MGGANRR1540 pKa = 11.84YY1541 pKa = 7.29ATAATIAQTAVGNSWAVWTVVGVATGRR1568 pKa = 11.84NFPDD1572 pKa = 3.71ALTGGVGIGKK1582 pKa = 9.39QKK1584 pKa = 11.01GVMLLTEE1591 pKa = 4.29PTVLSPEE1598 pKa = 4.06TKK1600 pKa = 9.55TAIEE1604 pKa = 4.39SNASEE1609 pKa = 4.05ILKK1612 pKa = 10.45LSVIGGPGAVSAAVSNAIADD1632 pKa = 4.36LLWW1635 pKa = 5.21

Molecular weight:
174.51 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1V1REZ6|A0A1V1REZ6_9ACTN NDH-1 subunit N 1 OS=Coriobacteriaceae bacterium EMTCatB1 OX=1927122 GN=nuoN PE=4 SV=1
MM1 pKa = 7.47RR2 pKa = 11.84AVLAGVVRR10 pKa = 11.84RR11 pKa = 11.84AQPARR16 pKa = 11.84HH17 pKa = 5.72HH18 pKa = 6.37RR19 pKa = 11.84GARR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84DD26 pKa = 3.18HH27 pKa = 6.62AGSRR31 pKa = 11.84KK32 pKa = 9.67RR33 pKa = 11.84PSCVAGRR40 pKa = 11.84CVRR43 pKa = 11.84RR44 pKa = 11.84VVWQRR49 pKa = 11.84AGDD52 pKa = 3.74RR53 pKa = 11.84RR54 pKa = 11.84HH55 pKa = 5.83GVAAGGSRR63 pKa = 11.84SCGGAVAPAFALPDD77 pKa = 3.43LRR79 pKa = 11.84QEE81 pKa = 3.81PRR83 pKa = 11.84RR84 pKa = 11.84RR85 pKa = 11.84AEE87 pKa = 3.62RR88 pKa = 11.84GEE90 pKa = 4.04RR91 pKa = 11.84LMGALLVSIGLPLAITVVIVAGGARR116 pKa = 11.84SVRR119 pKa = 11.84VTRR122 pKa = 11.84VFALAGPLAALAAGASLIASAHH144 pKa = 5.92GGAAAPSWNGAWLAQGGAAAPVGFAGDD171 pKa = 3.46ALAALMLVIVGAVAACVVAFSWGYY195 pKa = 8.18MAHH198 pKa = 7.38EE199 pKa = 5.39DD200 pKa = 3.85GQPRR204 pKa = 11.84YY205 pKa = 9.73YY206 pKa = 10.75AVLMLFVSAMSVLVLADD223 pKa = 3.5NLVTLFIGWEE233 pKa = 3.97LVGACSYY240 pKa = 11.33LLIGFWYY247 pKa = 9.69RR248 pKa = 11.84KK249 pKa = 8.5PAATRR254 pKa = 11.84AAIKK258 pKa = 10.7AFMTTRR264 pKa = 11.84VGDD267 pKa = 3.54VAMLVGMAVLWRR279 pKa = 11.84HH280 pKa = 6.03AGTLSVRR287 pKa = 11.84EE288 pKa = 3.95IVAALPRR295 pKa = 11.84MEE297 pKa = 5.44PGVITAAALLLFGGAAGKK315 pKa = 9.66SAQFPLHH322 pKa = 5.89IWLPDD327 pKa = 3.24AMEE330 pKa = 4.92GPTPVSALIHH340 pKa = 6.2AATMVASGVFLVARR354 pKa = 11.84TWPVFEE360 pKa = 5.01ASALARR366 pKa = 11.84TVMLAIGVVTALYY379 pKa = 10.2AAVVALAQTDD389 pKa = 3.69IKK391 pKa = 11.29KK392 pKa = 9.04MLAYY396 pKa = 9.55STISQLGFMFAALGAGAWGAAMFHH420 pKa = 6.46LTTHH424 pKa = 7.02AAFKK428 pKa = 10.94ALLFLAAGSVIHH440 pKa = 6.84GAGTQDD446 pKa = 3.19MRR448 pKa = 11.84EE449 pKa = 3.94MGGLAKK455 pKa = 10.66AMPVTAACWTAGALALSGWWPLSGFFSKK483 pKa = 10.79DD484 pKa = 3.1AIVAAVGHH492 pKa = 5.61VSSVASAALILTSALTALYY511 pKa = 9.79VWRR514 pKa = 11.84ATALAFLGSRR524 pKa = 11.84RR525 pKa = 11.84SDD527 pKa = 3.27QHH529 pKa = 7.29AHH531 pKa = 5.96EE532 pKa = 5.25SGIAMAAPLAVLAVLAVGLGWFGRR556 pKa = 11.84PFFEE560 pKa = 5.18LLSAEE565 pKa = 4.34EE566 pKa = 4.08AHH568 pKa = 6.68PAAATIALAVVAVAAGTAAAFAWWARR594 pKa = 11.84GRR596 pKa = 11.84EE597 pKa = 4.12APEE600 pKa = 4.05SGVCGSAWDD609 pKa = 3.66RR610 pKa = 11.84VRR612 pKa = 11.84AGFGVDD618 pKa = 3.05AALQAVTVRR627 pKa = 11.84PVLALARR634 pKa = 11.84WLDD637 pKa = 3.73DD638 pKa = 3.59VADD641 pKa = 3.76EE642 pKa = 5.39RR643 pKa = 11.84IIDD646 pKa = 3.81RR647 pKa = 11.84LAEE650 pKa = 4.34GSGKK654 pKa = 10.18LAVAAGGALAKK665 pKa = 10.12LQSGEE670 pKa = 3.9ADD672 pKa = 3.46VYY674 pKa = 11.45ASFVAVGFVVLAAIVLWAGGRR695 pKa = 3.53

Molecular weight:
71.8 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1659

0

1659

552506

34

2925

333.0

35.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.068 ± 0.088

1.077 ± 0.031

5.639 ± 0.037

6.77 ± 0.071

3.051 ± 0.033

8.553 ± 0.06

2.055 ± 0.035

4.349 ± 0.043

2.869 ± 0.054

9.679 ± 0.068

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.162 ± 0.028

1.717 ± 0.028

5.074 ± 0.042

2.537 ± 0.035

8.008 ± 0.078

5.444 ± 0.045

5.069 ± 0.047

9.522 ± 0.057

1.105 ± 0.022

2.252 ± 0.036

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski