Brazilian cedratvirus IHUMI

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA viruses; Pithoviridae

Average proteome isoelectric point is 6.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 533 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2R8FE23|A0A2R8FE23_9VIRU 5'-nucleotidase/apyrase OS=Brazilian cedratvirus IHUMI OX=2126980 GN=BRZCDTV_242 PE=4 SV=1
MM1 pKa = 7.77SNTTYY6 pKa = 10.03LTFNIARR13 pKa = 11.84NGNLLEE19 pKa = 4.29THH21 pKa = 6.55TEE23 pKa = 4.06TVLPQGKK30 pKa = 9.03LVIDD34 pKa = 3.89AQGTSFVSLRR44 pKa = 11.84YY45 pKa = 9.69NINSALIYY53 pKa = 10.81ARR55 pKa = 11.84DD56 pKa = 3.43EE57 pKa = 4.13LGILFTRR64 pKa = 11.84PYY66 pKa = 10.13KK67 pKa = 9.98MVWRR71 pKa = 11.84DD72 pKa = 2.95HH73 pKa = 6.74RR74 pKa = 11.84GRR76 pKa = 11.84LEE78 pKa = 3.8EE79 pKa = 3.91RR80 pKa = 11.84VYY82 pKa = 11.27SVDD85 pKa = 4.8DD86 pKa = 3.79NLPYY90 pKa = 10.26HH91 pKa = 6.79ASFVGDD97 pKa = 3.31YY98 pKa = 10.54SVEE101 pKa = 4.03IVKK104 pKa = 10.86LEE106 pKa = 3.84VLEE109 pKa = 4.35EE110 pKa = 4.2EE111 pKa = 5.25EE112 pKa = 4.54NEE114 pKa = 4.05FWNDD118 pKa = 3.13DD119 pKa = 3.65DD120 pKa = 5.5VEE122 pKa = 4.22EE123 pKa = 4.21TEE125 pKa = 5.28YY126 pKa = 11.43YY127 pKa = 10.75DD128 pKa = 4.73EE129 pKa = 5.31LDD131 pKa = 3.62EE132 pKa = 4.9YY133 pKa = 11.25EE134 pKa = 4.23EE135 pKa = 4.12EE136 pKa = 4.89PYY138 pKa = 10.98LEE140 pKa = 4.27EE141 pKa = 4.41EE142 pKa = 4.8EE143 pKa = 4.62YY144 pKa = 11.38

Molecular weight: 17.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2R8FEG9|A0A2R8FEG9_9VIRU Ribonucleoside-diphosphate reductase OS=Brazilian cedratvirus IHUMI OX=2126980 GN=BRZCDTV_310 PE=3 SV=1
LL1 pKa = 5.95GTNRR5 pKa = 11.84SLFTQHH11 pKa = 6.92RR12 pKa = 11.84SITFTKK18 pKa = 10.38RR19 pKa = 11.84EE20 pKa = 4.09NFVLLCSLSLSLSLSSPNVRR40 pKa = 11.84TSFSPKK46 pKa = 6.45VTKK49 pKa = 10.67VEE51 pKa = 4.1EE52 pKa = 4.36GTNRR56 pKa = 11.84SPLLSLYY63 pKa = 7.95TQGYY67 pKa = 4.9QTRR70 pKa = 11.84RR71 pKa = 11.84GYY73 pKa = 10.83QSFSFALSAPKK84 pKa = 8.72VTKK87 pKa = 10.61VEE89 pKa = 4.07EE90 pKa = 4.85GEE92 pKa = 4.33VGTNRR97 pKa = 11.84SLTNQTRR104 pKa = 11.84RR105 pKa = 11.84GYY107 pKa = 10.65QSFSFALSSPRR118 pKa = 11.84LLKK121 pKa = 10.81

Molecular weight: 13.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

533

0

533

128820

50

1581

241.7

27.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.481 ± 0.107

2.25 ± 0.094

4.923 ± 0.077

7.46 ± 0.119

4.565 ± 0.069

6.052 ± 0.212

1.863 ± 0.053

5.54 ± 0.073

5.995 ± 0.15

11.025 ± 0.155

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.903 ± 0.049

4.46 ± 0.08

4.342 ± 0.09

3.641 ± 0.067

5.245 ± 0.097

7.434 ± 0.113

5.333 ± 0.162

6.522 ± 0.078

1.306 ± 0.069

4.648 ± 0.077
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski