Bos taurus papillomavirus 20

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B2K242|A0A1B2K242_9PAPI E4 protein OS=Bos taurus papillomavirus 20 OX=1887218 GN=E4 PE=4 SV=1
MM1 pKa = 7.24VRR3 pKa = 11.84AQRR6 pKa = 11.84RR7 pKa = 11.84KK8 pKa = 9.5RR9 pKa = 11.84ASEE12 pKa = 3.67DD13 pKa = 2.98TLYY16 pKa = 10.56RR17 pKa = 11.84GCLAGQDD24 pKa = 4.1CPPDD28 pKa = 3.18IKK30 pKa = 10.94AKK32 pKa = 10.74YY33 pKa = 8.54EE34 pKa = 3.8QDD36 pKa = 3.29TLADD40 pKa = 5.53RR41 pKa = 11.84ILKK44 pKa = 8.66WVSTFLYY51 pKa = 9.77FGHH54 pKa = 7.29LGISSGKK61 pKa = 8.13GTGGQGGYY69 pKa = 8.03TRR71 pKa = 11.84LGGSGVSGGKK81 pKa = 7.96GTNVTRR87 pKa = 11.84PTVLVDD93 pKa = 3.71ALPPPGVPIDD103 pKa = 3.93TVSPDD108 pKa = 3.12SSIIPLLTDD117 pKa = 2.93SGGATTTDD125 pKa = 5.27LIPGTGEE132 pKa = 3.57IEE134 pKa = 4.2IVAEE138 pKa = 3.91VHH140 pKa = 6.31PPPTNGQDD148 pKa = 3.31SVIIGLEE155 pKa = 3.8PEE157 pKa = 4.29PPVLEE162 pKa = 4.21VTPEE166 pKa = 3.85HH167 pKa = 6.3TPIAPRR173 pKa = 11.84TRR175 pKa = 11.84TTVSKK180 pKa = 10.74HH181 pKa = 6.31DD182 pKa = 3.66NPAFNAYY189 pKa = 9.0VASTQLPAEE198 pKa = 4.29TAASDD203 pKa = 3.7NVHH206 pKa = 6.43IFHH209 pKa = 7.07GFGGEE214 pKa = 3.99IIGATEE220 pKa = 3.9GATFEE225 pKa = 4.66EE226 pKa = 5.01IPLEE230 pKa = 4.2EE231 pKa = 4.87FNPPTQGPSSSTPEE245 pKa = 3.71SGFRR249 pKa = 11.84GVLDD253 pKa = 3.74RR254 pKa = 11.84FQRR257 pKa = 11.84RR258 pKa = 11.84LYY260 pKa = 10.47NRR262 pKa = 11.84RR263 pKa = 11.84LVQQVKK269 pKa = 5.96VTRR272 pKa = 11.84RR273 pKa = 11.84SFLDD277 pKa = 3.5RR278 pKa = 11.84PSSLVRR284 pKa = 11.84WEE286 pKa = 4.35FDD288 pKa = 3.06NPTYY292 pKa = 10.95EE293 pKa = 5.21DD294 pKa = 4.16DD295 pKa = 3.77VSLLFEE301 pKa = 4.15QDD303 pKa = 3.3VHH305 pKa = 6.65NVSAAPDD312 pKa = 3.85LDD314 pKa = 3.79FQDD317 pKa = 3.75VVKK320 pKa = 10.78LSRR323 pKa = 11.84PHH325 pKa = 7.77IYY327 pKa = 10.15EE328 pKa = 3.66KK329 pKa = 10.56EE330 pKa = 4.15GYY332 pKa = 9.3IRR334 pKa = 11.84LSRR337 pKa = 11.84LGKK340 pKa = 9.98KK341 pKa = 8.77ATISTRR347 pKa = 11.84SGTTIGSQVHH357 pKa = 5.95YY358 pKa = 10.39YY359 pKa = 10.89SDD361 pKa = 4.34LSPIQPVEE369 pKa = 4.44EE370 pKa = 4.46IPLHH374 pKa = 5.56TFSSTDD380 pKa = 2.84RR381 pKa = 11.84SVIMQPLEE389 pKa = 3.63EE390 pKa = 4.15SVIIGSEE397 pKa = 4.11YY398 pKa = 10.06FDD400 pKa = 4.22EE401 pKa = 4.54NAVIYY406 pKa = 11.1NEE408 pKa = 4.23DD409 pKa = 3.51TSLLPEE415 pKa = 4.4FADD418 pKa = 5.21DD419 pKa = 4.94VLDD422 pKa = 4.96DD423 pKa = 4.63PYY425 pKa = 11.6EE426 pKa = 4.09EE427 pKa = 5.68DD428 pKa = 3.6FANTRR433 pKa = 11.84LEE435 pKa = 4.1VSGSSSRR442 pKa = 11.84QTIYY446 pKa = 10.97VPDD449 pKa = 5.59GIPPGSVRR457 pKa = 11.84AFVTDD462 pKa = 3.73YY463 pKa = 11.05NNHH466 pKa = 5.13STVTPEE472 pKa = 4.33GSNPLQPDD480 pKa = 4.07IIHH483 pKa = 7.2PDD485 pKa = 3.16IVPDD489 pKa = 4.65IILDD493 pKa = 3.75IYY495 pKa = 10.35TPGSTFYY502 pKa = 10.65LHH504 pKa = 6.96PSHH507 pKa = 6.28YY508 pKa = 9.65RR509 pKa = 11.84RR510 pKa = 11.84RR511 pKa = 11.84GRR513 pKa = 11.84KK514 pKa = 8.75RR515 pKa = 11.84KK516 pKa = 8.64RR517 pKa = 11.84TVFF520 pKa = 3.39

Molecular weight: 57.2 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B2K224|A0A1B2K224_9PAPI Replication protein E1 OS=Bos taurus papillomavirus 20 OX=1887218 GN=E1 PE=3 SV=1
MM1 pKa = 7.66EE2 pKa = 4.54EE3 pKa = 3.23LAARR7 pKa = 11.84FDD9 pKa = 4.08AVQEE13 pKa = 3.96RR14 pKa = 11.84LMQIYY19 pKa = 10.16EE20 pKa = 4.32SGSVTLEE27 pKa = 3.75SQIEE31 pKa = 4.34YY32 pKa = 6.25WTVVRR37 pKa = 11.84KK38 pKa = 9.83EE39 pKa = 3.55YY40 pKa = 11.08ALYY43 pKa = 8.85YY44 pKa = 8.01TARR47 pKa = 11.84KK48 pKa = 9.46QGIKK52 pKa = 10.45KK53 pKa = 10.04LGLYY57 pKa = 8.15VVPSLQIAEE66 pKa = 4.36QKK68 pKa = 10.58AKK70 pKa = 10.36EE71 pKa = 4.3AIRR74 pKa = 11.84MTLYY78 pKa = 10.94LEE80 pKa = 4.52SLSKK84 pKa = 10.96SQFGDD89 pKa = 3.8LQWTLPEE96 pKa = 4.14TSLEE100 pKa = 4.3TFSAPPANTFKK111 pKa = 11.1KK112 pKa = 10.13KK113 pKa = 9.63GAQAIVTYY121 pKa = 10.98DD122 pKa = 3.5NDD124 pKa = 3.83PEE126 pKa = 3.98NRR128 pKa = 11.84MMYY131 pKa = 8.24TVWKK135 pKa = 9.19EE136 pKa = 3.56LYY138 pKa = 9.37YY139 pKa = 10.47QDD141 pKa = 5.65DD142 pKa = 3.72EE143 pKa = 4.81EE144 pKa = 4.35MWHH147 pKa = 6.65KK148 pKa = 11.18GEE150 pKa = 4.15STVNHH155 pKa = 6.08EE156 pKa = 4.34GIYY159 pKa = 10.64YY160 pKa = 10.07VDD162 pKa = 3.14NTGRR166 pKa = 11.84TVYY169 pKa = 9.71YY170 pKa = 10.59QRR172 pKa = 11.84FAQDD176 pKa = 3.15AEE178 pKa = 4.38RR179 pKa = 11.84FSKK182 pKa = 10.28SGQWNVQYY190 pKa = 10.72EE191 pKa = 4.4NQVFSAPVTSSSRR204 pKa = 11.84QLRR207 pKa = 11.84TPRR210 pKa = 11.84GQGPEE215 pKa = 3.94EE216 pKa = 4.24RR217 pKa = 11.84QDD219 pKa = 3.24STGAQTHH226 pKa = 5.97SPAAGPRR233 pKa = 11.84QPAAPASRR241 pKa = 11.84RR242 pKa = 11.84PPVRR246 pKa = 11.84PSLRR250 pKa = 11.84GSRR253 pKa = 11.84GSLSSAEE260 pKa = 3.88RR261 pKa = 11.84GPRR264 pKa = 11.84RR265 pKa = 11.84GRR267 pKa = 11.84RR268 pKa = 11.84GPRR271 pKa = 11.84AGRR274 pKa = 11.84QTSTSDD280 pKa = 2.84GSSRR284 pKa = 11.84SRR286 pKa = 11.84SRR288 pKa = 11.84SRR290 pKa = 11.84SRR292 pKa = 11.84TRR294 pKa = 11.84SRR296 pKa = 11.84SRR298 pKa = 11.84SRR300 pKa = 11.84GPEE303 pKa = 3.69SGGQAPVSPEE313 pKa = 3.74EE314 pKa = 3.86VGTRR318 pKa = 11.84TRR320 pKa = 11.84TPEE323 pKa = 3.64TRR325 pKa = 11.84PTSRR329 pKa = 11.84IAQLIEE335 pKa = 4.05DD336 pKa = 4.11ARR338 pKa = 11.84DD339 pKa = 3.58PPVLLLQGPANSLKK353 pKa = 10.35CFRR356 pKa = 11.84RR357 pKa = 11.84RR358 pKa = 11.84SKK360 pKa = 8.73TQHH363 pKa = 6.53PSLFLCMSTSWSWVCRR379 pKa = 11.84TSTQKK384 pKa = 10.81LGNRR388 pKa = 11.84MLVAFSDD395 pKa = 3.9ASQRR399 pKa = 11.84TAFLSRR405 pKa = 11.84VKK407 pKa = 10.53LPRR410 pKa = 11.84GVTWTTGSLNGLL422 pKa = 3.82

Molecular weight: 47.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2458

93

598

351.1

39.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.021 ± 0.647

2.034 ± 0.603

5.858 ± 0.669

6.347 ± 0.3

4.434 ± 0.706

6.387 ± 0.724

1.993 ± 0.217

4.231 ± 0.613

5.614 ± 0.973

8.747 ± 0.74

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.749 ± 0.358

3.662 ± 0.495

6.876 ± 0.916

5.004 ± 0.401

6.509 ± 1.066

7.608 ± 0.805

6.021 ± 0.915

6.021 ± 0.418

1.424 ± 0.284

3.458 ± 0.208
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski