Candidatus Altiarchaeales archaeon WOR_SM1_SCG

Taxonomy: cellular organisms; Archaea; DPANN group; Candidatus Altiarchaeota; Candidatus Altiarchaeales; unclassified Candidatus Altiarchaeales

Average proteome isoelectric point is 6.73

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2164 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1D2RA85|A0A1D2RA85_9ARCH INTEIN_C_TER domain-containing protein (Fragment) OS=Candidatus Altiarchaeales archaeon WOR_SM1_SCG OX=1849261 GN=BEH94_04500 PE=3 SV=1
MM1 pKa = 6.85KK2 pKa = 9.63TSNIILLIFVFEE14 pKa = 4.97IILSNLCASEE24 pKa = 3.88EE25 pKa = 4.0AGLVGEE31 pKa = 4.08WHH33 pKa = 6.85FNEE36 pKa = 4.03TDD38 pKa = 3.15GNIAYY43 pKa = 9.64DD44 pKa = 3.87FSGNGNDD51 pKa = 3.74GTINGASWVGGVSGSALSFDD71 pKa = 3.66GNDD74 pKa = 3.47YY75 pKa = 11.57VNTNLHH81 pKa = 6.53LPQGSKK87 pKa = 8.3TVEE90 pKa = 3.26AWIKK94 pKa = 11.01GFGTTYY100 pKa = 9.75STEE103 pKa = 3.97CPIAGEE109 pKa = 4.12RR110 pKa = 11.84WYY112 pKa = 10.88SAAGGGEE119 pKa = 3.84QLNLGVKK126 pKa = 8.71TDD128 pKa = 3.94EE129 pKa = 4.17SAMLYY134 pKa = 10.29VYY136 pKa = 10.67SEE138 pKa = 4.57DD139 pKa = 3.6KK140 pKa = 11.16GSGVNAVSDD149 pKa = 4.67SNILDD154 pKa = 3.36QTKK157 pKa = 7.77WHH159 pKa = 7.06HH160 pKa = 5.83IAGTYY165 pKa = 9.21EE166 pKa = 3.95VGDD169 pKa = 3.6TDD171 pKa = 4.51AVLKK175 pKa = 10.49IYY177 pKa = 10.32IDD179 pKa = 3.77GTLHH183 pKa = 6.27DD184 pKa = 4.65TVHH187 pKa = 6.5GPIDD191 pKa = 3.78IDD193 pKa = 3.67NHH195 pKa = 5.4ISTYY199 pKa = 10.7LIGVWRR205 pKa = 11.84RR206 pKa = 11.84GTGAVGVRR214 pKa = 11.84YY215 pKa = 9.22FKK217 pKa = 11.17GVIDD221 pKa = 3.79EE222 pKa = 4.0VRR224 pKa = 11.84IYY226 pKa = 11.17NRR228 pKa = 11.84ALTATEE234 pKa = 3.53ISDD237 pKa = 4.47RR238 pKa = 11.84YY239 pKa = 8.55YY240 pKa = 10.32QQDD243 pKa = 3.29MDD245 pKa = 4.45RR246 pKa = 11.84DD247 pKa = 3.85GVLNINDD254 pKa = 3.54QCPNTTAKK262 pKa = 10.82CEE264 pKa = 4.07VDD266 pKa = 4.28SSGCPLDD273 pKa = 4.05SDD275 pKa = 5.01NDD277 pKa = 4.15NICNGIDD284 pKa = 3.45TCPNTPLNCNVSSTGCKK301 pKa = 8.95IDD303 pKa = 3.53SDD305 pKa = 4.43SDD307 pKa = 4.33GVCNGVDD314 pKa = 3.47PCPNDD319 pKa = 5.64LEE321 pKa = 4.66DD322 pKa = 4.48CCTATTDD329 pKa = 3.54TDD331 pKa = 3.53NDD333 pKa = 3.95SLQEE337 pKa = 4.27SNSNCPNYY345 pKa = 10.46DD346 pKa = 3.6SYY348 pKa = 12.06PNDD351 pKa = 3.56HH352 pKa = 7.51DD353 pKa = 3.99NDD355 pKa = 4.31GVVSSVDD362 pKa = 4.0CDD364 pKa = 4.46DD365 pKa = 4.6SDD367 pKa = 5.0AGNTKK372 pKa = 9.58TKK374 pKa = 10.67GDD376 pKa = 3.91SDD378 pKa = 3.98NDD380 pKa = 4.06GVDD383 pKa = 3.34NCIDD387 pKa = 3.68SCPNDD392 pKa = 3.64AGNQCGCVDD401 pKa = 3.97HH402 pKa = 7.47DD403 pKa = 4.73GDD405 pKa = 4.84GLGEE409 pKa = 4.19GAGCRR414 pKa = 11.84DD415 pKa = 3.66PCSNDD420 pKa = 3.27KK421 pKa = 11.11DD422 pKa = 4.09NCCTAITDD430 pKa = 3.71TDD432 pKa = 3.62NDD434 pKa = 3.92GLQEE438 pKa = 4.28NNVNCPNYY446 pKa = 10.6DD447 pKa = 3.35NYY449 pKa = 11.47LNDD452 pKa = 3.84HH453 pKa = 7.27DD454 pKa = 4.59NDD456 pKa = 4.26GVISSVDD463 pKa = 3.78CDD465 pKa = 5.12DD466 pKa = 4.71SDD468 pKa = 5.0AGNTKK473 pKa = 9.56TKK475 pKa = 10.56GDD477 pKa = 3.81SDD479 pKa = 4.19GDD481 pKa = 4.01GLNNCQDD488 pKa = 3.67SCPDD492 pKa = 4.03DD493 pKa = 5.42ANNQCGCVDD502 pKa = 3.53NDD504 pKa = 3.78GDD506 pKa = 4.38GLGEE510 pKa = 4.19GTGCADD516 pKa = 3.83PCPNDD521 pKa = 4.79RR522 pKa = 11.84DD523 pKa = 3.95NCCIATTDD531 pKa = 3.76ADD533 pKa = 3.77NDD535 pKa = 3.55NLQEE539 pKa = 4.27NNQDD543 pKa = 3.41CPNYY547 pKa = 10.58DD548 pKa = 3.55NYY550 pKa = 11.48LNDD553 pKa = 3.88HH554 pKa = 7.24DD555 pKa = 4.82NDD557 pKa = 4.19GVTTLMDD564 pKa = 5.18CDD566 pKa = 5.76DD567 pKa = 4.41SDD569 pKa = 4.72ADD571 pKa = 3.73NVKK574 pKa = 10.34IKK576 pKa = 10.62GDD578 pKa = 4.08CGDD581 pKa = 3.5QEE583 pKa = 4.53QIPVVNVTVVNEE595 pKa = 3.73ITVINTITIANEE607 pKa = 4.3TIFSAVTTINEE618 pKa = 3.73TRR620 pKa = 11.84RR621 pKa = 11.84YY622 pKa = 9.63LNVSEE627 pKa = 4.21EE628 pKa = 4.27VNLEE632 pKa = 3.85VEE634 pKa = 4.53EE635 pKa = 4.57KK636 pKa = 10.23IKK638 pKa = 10.65EE639 pKa = 4.07VEE641 pKa = 4.16DD642 pKa = 4.13LIEE645 pKa = 4.07RR646 pKa = 11.84AKK648 pKa = 10.98EE649 pKa = 3.87KK650 pKa = 10.47IALANSLINTDD661 pKa = 3.74PKK663 pKa = 10.82RR664 pKa = 11.84AMDD667 pKa = 3.58EE668 pKa = 4.16AEE670 pKa = 4.37EE671 pKa = 4.28SNEE674 pKa = 3.73LAEE677 pKa = 4.32RR678 pKa = 11.84AVKK681 pKa = 9.07LTMEE685 pKa = 4.52LSKK688 pKa = 11.04NYY690 pKa = 7.99KK691 pKa = 8.64TKK693 pKa = 10.91SSVLPATSQSDD704 pKa = 3.54ALVSEE709 pKa = 4.62TEE711 pKa = 4.24EE712 pKa = 4.23FSGDD716 pKa = 3.25TFKK719 pKa = 9.31WTGIAGIVCFIILTGILIFAARR741 pKa = 11.84KK742 pKa = 9.59KK743 pKa = 10.24YY744 pKa = 10.59

Molecular weight: 80.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1D2QUD6|A0A1D2QUD6_9ARCH PQQ_3 domain-containing protein OS=Candidatus Altiarchaeales archaeon WOR_SM1_SCG OX=1849261 GN=BEH94_01960 PE=4 SV=1
MM1 pKa = 7.26YY2 pKa = 10.79SHH4 pKa = 6.87TKK6 pKa = 9.9KK7 pKa = 10.34VGSIGRR13 pKa = 11.84YY14 pKa = 7.07GPRR17 pKa = 11.84VGRR20 pKa = 11.84KK21 pKa = 7.36VRR23 pKa = 11.84MAMRR27 pKa = 11.84KK28 pKa = 9.03IEE30 pKa = 4.51DD31 pKa = 3.46KK32 pKa = 10.64TRR34 pKa = 11.84EE35 pKa = 4.0ANKK38 pKa = 10.17CKK40 pKa = 10.62SCGKK44 pKa = 9.26PKK46 pKa = 9.9IRR48 pKa = 11.84RR49 pKa = 11.84EE50 pKa = 3.77SAGIWKK56 pKa = 9.46CRR58 pKa = 11.84ACGVTFTGGAHH69 pKa = 6.47LPVTEE74 pKa = 4.27RR75 pKa = 11.84RR76 pKa = 3.73

Molecular weight: 8.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2164

0

2164

656850

48

5438

303.5

34.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.755 ± 0.058

1.631 ± 0.052

5.798 ± 0.053

7.891 ± 0.071

4.31 ± 0.049

6.904 ± 0.052

1.629 ± 0.022

9.204 ± 0.054

8.965 ± 0.103

8.459 ± 0.073

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.274 ± 0.028

5.937 ± 0.115

3.401 ± 0.034

2.024 ± 0.026

3.914 ± 0.049

5.869 ± 0.057

5.085 ± 0.082

6.252 ± 0.049

0.958 ± 0.02

3.738 ± 0.053
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski