Marinospirillum celere

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oceanospirillaceae; Marinospirillum

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2818 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1I1G398|A0A1I1G398_9GAMM Ribosome-associated protein OS=Marinospirillum celere OX=1122252 GN=SAMN05660443_1256 PE=4 SV=1
MM1 pKa = 7.57KK2 pKa = 10.38KK3 pKa = 10.61LNLALLISLGWLLTACLAEE22 pKa = 3.96QDD24 pKa = 3.6EE25 pKa = 4.86SSRR28 pKa = 11.84QLGSDD33 pKa = 3.43ASQGGEE39 pKa = 3.79YY40 pKa = 10.22RR41 pKa = 11.84QGEE44 pKa = 4.11GTARR48 pKa = 11.84VEE50 pKa = 4.58FSVHH54 pKa = 5.82LPGDD58 pKa = 3.57ASAAYY63 pKa = 9.35IDD65 pKa = 4.04TEE67 pKa = 4.16NTRR70 pKa = 11.84SIVVSVFPSSIAGFDD85 pKa = 3.28VDD87 pKa = 5.06RR88 pKa = 11.84FQATDD93 pKa = 3.05VLRR96 pKa = 11.84AYY98 pKa = 7.3FQCVMANAPSEE109 pKa = 3.99GDD111 pKa = 3.17MGIQEE116 pKa = 4.45MEE118 pKa = 4.58SACGRR123 pKa = 11.84YY124 pKa = 8.15PAQIADD130 pKa = 3.92TPLYY134 pKa = 10.61SATLTSDD141 pKa = 3.93LPAAGFNLQPGNSYY155 pKa = 10.34IVLAAQYY162 pKa = 10.5SSSNPAGLTPVGWTTTTITPNDD184 pKa = 3.67GNNDD188 pKa = 3.2VEE190 pKa = 5.28LNLLYY195 pKa = 10.72GSWEE199 pKa = 3.94FDD201 pKa = 3.12GGPSLQLLNRR211 pKa = 11.84STYY214 pKa = 11.31AFGNFIGFNEE224 pKa = 3.93EE225 pKa = 3.8DD226 pKa = 3.45LEE228 pKa = 4.49EE229 pKa = 4.2FTEE232 pKa = 5.59APDD235 pKa = 2.86WWPASTHH242 pKa = 5.69VMSTPAMALGLADD255 pKa = 4.23TGDD258 pKa = 3.34ATINLDD264 pKa = 3.67RR265 pKa = 11.84LHH267 pKa = 6.51LRR269 pKa = 11.84SYY271 pKa = 11.62YY272 pKa = 10.14EE273 pKa = 4.0LSPNNQVDD281 pKa = 3.65SARR284 pKa = 11.84NDD286 pKa = 3.03EE287 pKa = 4.52GIRR290 pKa = 11.84LFGAQGEE297 pKa = 4.37PDD299 pKa = 3.55NFDD302 pKa = 5.13LFGQYY307 pKa = 9.43PWGILAPHH315 pKa = 6.76EE316 pKa = 4.69PLLQSSVAGNAFFVEE331 pKa = 4.38PRR333 pKa = 11.84FEE335 pKa = 4.13LVEE338 pKa = 5.09GIDD341 pKa = 4.74DD342 pKa = 5.65DD343 pKa = 4.78PDD345 pKa = 4.25LMLGRR350 pKa = 11.84GVYY353 pKa = 10.01EE354 pKa = 4.57PATLMQQYY362 pKa = 10.66APEE365 pKa = 3.73QSQANRR371 pKa = 11.84HH372 pKa = 5.13RR373 pKa = 11.84LGLGTWEE380 pKa = 3.96VTIGEE385 pKa = 4.52EE386 pKa = 3.74ISTEE390 pKa = 3.93NVEE393 pKa = 4.07IFAGLMLVSGEE404 pKa = 3.92NDD406 pKa = 2.9ILNLLRR412 pKa = 11.84DD413 pKa = 3.58ATEE416 pKa = 3.77EE417 pKa = 4.25VEE419 pKa = 4.41GQRR422 pKa = 11.84SFDD425 pKa = 3.43QLNVRR430 pKa = 11.84RR431 pKa = 11.84PVFDD435 pKa = 3.3QFGQFGQFGQFGQFGQFGQPVPEE458 pKa = 4.28VLPEE462 pKa = 4.26SNLTIAFFDD471 pKa = 3.86IEE473 pKa = 4.47TQQGEE478 pKa = 4.35LLIAEE483 pKa = 4.64GTDD486 pKa = 3.36TQNFQALDD494 pKa = 3.47ALEE497 pKa = 4.21PTRR500 pKa = 11.84LTAADD505 pKa = 5.37RR506 pKa = 11.84IQGSLIEE513 pKa = 4.13YY514 pKa = 8.41VGYY517 pKa = 10.87YY518 pKa = 9.83NAIEE522 pKa = 4.35SPPYY526 pKa = 10.08QYY528 pKa = 11.22PLLLEE533 pKa = 4.79DD534 pKa = 3.98EE535 pKa = 5.02EE536 pKa = 6.06GNFTQVDD543 pKa = 4.42TIEE546 pKa = 4.14VNPVIGGVAASSSLQNTSGSSLRR569 pKa = 11.84SSSQALILRR578 pKa = 11.84NLQLSALAADD588 pKa = 4.11SGLIASTAASGCFVMDD604 pKa = 4.91LDD606 pKa = 4.13VQRR609 pKa = 11.84VSSFYY614 pKa = 10.93LFNPDD619 pKa = 3.17EE620 pKa = 4.47EE621 pKa = 4.79TWLPAAPEE629 pKa = 3.79FGYY632 pKa = 9.74WYY634 pKa = 9.74QAEE637 pKa = 4.45DD638 pKa = 3.4GSYY641 pKa = 11.01LRR643 pKa = 11.84DD644 pKa = 3.41EE645 pKa = 4.46EE646 pKa = 4.97GKK648 pKa = 9.9IEE650 pKa = 4.16TFGTGASPSEE660 pKa = 4.0TLEE663 pKa = 3.98EE664 pKa = 4.63DD665 pKa = 3.65GVIYY669 pKa = 10.28SIQPSGGMTGIIDD682 pKa = 4.15ASTDD686 pKa = 3.53EE687 pKa = 5.34SDD689 pKa = 4.81LEE691 pKa = 4.23QNFYY695 pKa = 10.95AWSEE699 pKa = 4.04EE700 pKa = 3.92GSGKK704 pKa = 10.08VEE706 pKa = 4.01VCIQPVSLTAGPYY719 pKa = 10.5SNPEE723 pKa = 3.77YY724 pKa = 10.35NAEE727 pKa = 3.97SDD729 pKa = 4.4VVIQQ733 pKa = 4.44

Molecular weight: 79.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1I1IAE0|A0A1I1IAE0_9GAMM Sulfur carrier protein OS=Marinospirillum celere OX=1122252 GN=SAMN05660443_2299 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.46RR12 pKa = 11.84KK13 pKa = 9.37RR14 pKa = 11.84NHH16 pKa = 5.37GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.3NGRR28 pKa = 11.84AVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.62GRR39 pKa = 11.84KK40 pKa = 9.11RR41 pKa = 11.84ISAA44 pKa = 3.72

Molecular weight: 5.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2818

0

2818

946962

37

5359

336.0

37.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.535 ± 0.051

0.87 ± 0.015

5.301 ± 0.039

7.06 ± 0.051

3.728 ± 0.031

7.125 ± 0.058

2.163 ± 0.021

4.912 ± 0.039

4.225 ± 0.046

12.509 ± 0.077

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.279 ± 0.026

3.255 ± 0.04

4.533 ± 0.04

5.63 ± 0.056

5.757 ± 0.052

5.86 ± 0.039

4.874 ± 0.07

6.363 ± 0.04

1.467 ± 0.024

2.553 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski