Intestinibaculum porci

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Intestinibaculum

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2890 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G9JBQ8|A0A3G9JBQ8_9FIRM L-lactate dehydrogenase OS=Intestinibaculum porci OX=2487118 GN=ldh3 PE=3 SV=1
MM1 pKa = 7.59AMKK4 pKa = 10.09DD5 pKa = 3.74YY6 pKa = 10.52EE7 pKa = 4.29ISSDD11 pKa = 3.64PLTEE15 pKa = 5.28KK16 pKa = 10.99DD17 pKa = 3.85DD18 pKa = 5.5DD19 pKa = 4.81YY20 pKa = 11.74DD21 pKa = 4.66PEE23 pKa = 4.28MYY25 pKa = 10.54EE26 pKa = 4.56DD27 pKa = 4.55GSTEE31 pKa = 4.24AMGAYY36 pKa = 7.63YY37 pKa = 9.82TYY39 pKa = 10.58IANSLSRR46 pKa = 11.84IKK48 pKa = 9.69TALSATSSSKK58 pKa = 10.55KK59 pKa = 9.67IKK61 pKa = 10.33EE62 pKa = 4.06LMSSDD67 pKa = 3.65EE68 pKa = 4.72NINIYY73 pKa = 10.77QMLIDD78 pKa = 5.32DD79 pKa = 4.72PRR81 pKa = 11.84LMKK84 pKa = 10.31DD85 pKa = 2.56IRR87 pKa = 11.84EE88 pKa = 4.29AMSSDD93 pKa = 3.08IIKK96 pKa = 10.58PFDD99 pKa = 3.91EE100 pKa = 5.55DD101 pKa = 4.14NLLEE105 pKa = 4.68LYY107 pKa = 9.25MNKK110 pKa = 9.3VSDD113 pKa = 5.11LISQIEE119 pKa = 4.05YY120 pKa = 10.07VYY122 pKa = 10.75PEE124 pKa = 3.52IYY126 pKa = 6.96MTLMHH131 pKa = 7.28KK132 pKa = 10.21ILPYY136 pKa = 10.54SVASYY141 pKa = 9.26YY142 pKa = 11.07DD143 pKa = 3.29QMVSEE148 pKa = 4.31EE149 pKa = 3.88NDD151 pKa = 3.0RR152 pKa = 11.84DD153 pKa = 3.7FEE155 pKa = 4.58YY156 pKa = 10.51AIQDD160 pKa = 3.9DD161 pKa = 4.37DD162 pKa = 4.11VQFF165 pKa = 3.99

Molecular weight: 19.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3G9JAT8|A0A3G9JAT8_9FIRM PTS EIIB type-3 domain-containing protein OS=Intestinibaculum porci OX=2487118 GN=SG0102_26300 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.62RR10 pKa = 11.84KK11 pKa = 9.56RR12 pKa = 11.84AKK14 pKa = 8.76THH16 pKa = 5.23GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84KK29 pKa = 9.34VIARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84KK36 pKa = 8.84RR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 8.41VLSVV44 pKa = 3.22

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2890

0

2890

889665

40

4468

307.8

34.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.096 ± 0.041

1.239 ± 0.016

6.225 ± 0.043

6.255 ± 0.051

4.215 ± 0.035

6.07 ± 0.041

2.662 ± 0.027

7.511 ± 0.048

7.861 ± 0.049

9.166 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.05 ± 0.027

4.717 ± 0.039

3.094 ± 0.022

3.281 ± 0.027

3.943 ± 0.035

5.907 ± 0.043

5.683 ± 0.053

6.488 ± 0.037

0.688 ± 0.013

4.85 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski