Aurantiacibacter gangjinensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Aurantiacibacter

Average proteome isoelectric point is 5.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2492 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0G9MMK8|A0A0G9MMK8_9SPHN Uncharacterized protein OS=Aurantiacibacter gangjinensis OX=502682 GN=AAW01_10215 PE=3 SV=1
MM1 pKa = 7.74TIRR4 pKa = 11.84STAAIMLAATALIAAPAYY22 pKa = 9.16AQEE25 pKa = 4.98DD26 pKa = 4.0IEE28 pKa = 4.3PAVPNIDD35 pKa = 4.26LDD37 pKa = 4.06DD38 pKa = 4.28AVFSGDD44 pKa = 3.39FVTVGVGGAYY54 pKa = 8.47TPSYY58 pKa = 9.98QGSDD62 pKa = 3.68DD63 pKa = 3.92YY64 pKa = 11.7VLSVLPVIIGSYY76 pKa = 10.59GGIDD80 pKa = 3.39VNPRR84 pKa = 11.84AGGITVDD91 pKa = 4.62FVPDD95 pKa = 3.59NDD97 pKa = 4.25SGLSFDD103 pKa = 4.45AGIAARR109 pKa = 11.84FRR111 pKa = 11.84GDD113 pKa = 2.91RR114 pKa = 11.84ASQIEE119 pKa = 4.41DD120 pKa = 3.26EE121 pKa = 4.54VVEE124 pKa = 4.19QFGEE128 pKa = 4.09LDD130 pKa = 3.42TAIEE134 pKa = 4.28VGPSVGVNIDD144 pKa = 3.34GVLNPFDD151 pKa = 3.75TVSFGTAVMWDD162 pKa = 3.21VAGAHH167 pKa = 6.57EE168 pKa = 4.55GMVVNPVASYY178 pKa = 7.39TTPLSRR184 pKa = 11.84AVIGNLSLSAEE195 pKa = 4.19WADD198 pKa = 3.68EE199 pKa = 4.58DD200 pKa = 3.8YY201 pKa = 10.92HH202 pKa = 9.03DD203 pKa = 4.11YY204 pKa = 10.96YY205 pKa = 11.44FRR207 pKa = 11.84VDD209 pKa = 4.51PINNVNVAPNSDD221 pKa = 3.82ALPGFEE227 pKa = 4.7PDD229 pKa = 3.03SGGFKK234 pKa = 10.6SLSATMLVGIDD245 pKa = 3.88LDD247 pKa = 4.52GNALNGGWGIVVLGGYY263 pKa = 7.27TRR265 pKa = 11.84LVGDD269 pKa = 4.11AADD272 pKa = 3.96TPFTSIRR279 pKa = 11.84GSADD283 pKa = 2.54QWLGALGITYY293 pKa = 8.51TFGLL297 pKa = 4.13

Molecular weight: 30.92 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0G9MKW5|A0A0G9MKW5_9SPHN ATP-dependent protease OS=Aurantiacibacter gangjinensis OX=502682 GN=AAW01_06875 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNLVRR12 pKa = 11.84ARR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.89GFFARR21 pKa = 11.84KK22 pKa = 7.42ATPGGRR28 pKa = 11.84KK29 pKa = 7.9VLRR32 pKa = 11.84NRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 6.15TLCAA44 pKa = 4.05

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2492

0

2492

788013

41

8405

316.2

34.35

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.487 ± 0.07

0.796 ± 0.015

6.691 ± 0.07

6.506 ± 0.051

3.668 ± 0.031

8.759 ± 0.057

1.93 ± 0.029

5.09 ± 0.037

2.861 ± 0.052

9.649 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.632 ± 0.03

2.66 ± 0.03

4.98 ± 0.039

3.2 ± 0.025

6.947 ± 0.06

5.235 ± 0.035

5.214 ± 0.033

7.028 ± 0.042

1.431 ± 0.02

2.236 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski