Amino acid dipepetide frequency for Wenling red spikefish hantavirus

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
5.755AlaAla: 5.755 ± 0.0
1.439AlaCys: 1.439 ± 0.0
2.398AlaAsp: 2.398 ± 0.0
6.235AlaGlu: 6.235 ± 0.0
0.959AlaPhe: 0.959 ± 0.0
3.357AlaGly: 3.357 ± 0.0
0.959AlaHis: 0.959 ± 0.0
2.878AlaIle: 2.878 ± 0.0
7.674AlaLys: 7.674 ± 0.0
4.317AlaLeu: 4.317 ± 0.0
4.317AlaMet: 4.317 ± 0.0
2.878AlaAsn: 2.878 ± 0.0
1.439AlaPro: 1.439 ± 0.0
0.959AlaGln: 0.959 ± 0.0
0.959AlaArg: 0.959 ± 0.0
6.235AlaSer: 6.235 ± 0.0
3.357AlaThr: 3.357 ± 0.0
2.398AlaVal: 2.398 ± 0.0
1.439AlaTrp: 1.439 ± 0.0
2.398AlaTyr: 2.398 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.48CysCys: 0.48 ± 0.0
0.959CysAsp: 0.959 ± 0.0
1.918CysGlu: 1.918 ± 0.0
0.48CysPhe: 0.48 ± 0.0
1.439CysGly: 1.439 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.48CysIle: 0.48 ± 0.0
0.0CysLys: 0.0 ± 0.0
0.959CysLeu: 0.959 ± 0.0
0.48CysMet: 0.48 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.48CysPro: 0.48 ± 0.0
0.0CysGln: 0.0 ± 0.0
0.48CysArg: 0.48 ± 0.0
0.959CysSer: 0.959 ± 0.0
0.959CysThr: 0.959 ± 0.0
0.959CysVal: 0.959 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.48CysTyr: 0.48 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.398AspAla: 2.398 ± 0.0
0.48AspCys: 0.48 ± 0.0
3.837AspAsp: 3.837 ± 0.0
3.357AspGlu: 3.357 ± 0.0
4.317AspPhe: 4.317 ± 0.0
4.796AspGly: 4.796 ± 0.0
0.0AspHis: 0.0 ± 0.0
5.276AspIle: 5.276 ± 0.0
1.439AspLys: 1.439 ± 0.0
7.674AspLeu: 7.674 ± 0.0
1.918AspMet: 1.918 ± 0.0
1.918AspAsn: 1.918 ± 0.0
3.357AspPro: 3.357 ± 0.0
0.959AspGln: 0.959 ± 0.0
3.837AspArg: 3.837 ± 0.0
2.398AspSer: 2.398 ± 0.0
3.357AspThr: 3.357 ± 0.0
5.276AspVal: 5.276 ± 0.0
0.959AspTrp: 0.959 ± 0.0
1.439AspTyr: 1.439 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.276GluAla: 5.276 ± 0.0
1.439GluCys: 1.439 ± 0.0
4.317GluAsp: 4.317 ± 0.0
7.674GluGlu: 7.674 ± 0.0
5.755GluPhe: 5.755 ± 0.0
4.317GluGly: 4.317 ± 0.0
0.48GluHis: 0.48 ± 0.0
3.357GluIle: 3.357 ± 0.0
4.317GluLys: 4.317 ± 0.0
8.633GluLeu: 8.633 ± 0.0
3.357GluMet: 3.357 ± 0.0
5.755GluAsn: 5.755 ± 0.0
3.357GluPro: 3.357 ± 0.0
0.959GluGln: 0.959 ± 0.0
4.796GluArg: 4.796 ± 0.0
7.194GluSer: 7.194 ± 0.0
2.878GluThr: 2.878 ± 0.0
4.796GluVal: 4.796 ± 0.0
1.439GluTrp: 1.439 ± 0.0
1.439GluTyr: 1.439 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.439PheAla: 1.439 ± 0.0
0.959PheCys: 0.959 ± 0.0
2.398PheAsp: 2.398 ± 0.0
2.878PheGlu: 2.878 ± 0.0
2.878PhePhe: 2.878 ± 0.0
3.837PheGly: 3.837 ± 0.0
1.439PheHis: 1.439 ± 0.0
1.439PheIle: 1.439 ± 0.0
0.48PheLys: 0.48 ± 0.0
6.235PheLeu: 6.235 ± 0.0
0.959PheMet: 0.959 ± 0.0
0.959PheAsn: 0.959 ± 0.0
0.959PhePro: 0.959 ± 0.0
1.918PheGln: 1.918 ± 0.0
1.439PheArg: 1.439 ± 0.0
5.276PheSer: 5.276 ± 0.0
2.878PheThr: 2.878 ± 0.0
2.878PheVal: 2.878 ± 0.0
0.48PheTrp: 0.48 ± 0.0
1.439PheTyr: 1.439 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.837GlyAla: 3.837 ± 0.0
0.0GlyCys: 0.0 ± 0.0
4.317GlyAsp: 4.317 ± 0.0
3.837GlyGlu: 3.837 ± 0.0
1.918GlyPhe: 1.918 ± 0.0
5.276GlyGly: 5.276 ± 0.0
0.48GlyHis: 0.48 ± 0.0
4.796GlyIle: 4.796 ± 0.0
6.235GlyLys: 6.235 ± 0.0
3.837GlyLeu: 3.837 ± 0.0
1.918GlyMet: 1.918 ± 0.0
2.878GlyAsn: 2.878 ± 0.0
1.439GlyPro: 1.439 ± 0.0
1.918GlyGln: 1.918 ± 0.0
4.796GlyArg: 4.796 ± 0.0
3.837GlySer: 3.837 ± 0.0
4.317GlyThr: 4.317 ± 0.0
4.317GlyVal: 4.317 ± 0.0
0.959GlyTrp: 0.959 ± 0.0
3.837GlyTyr: 3.837 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.48HisAla: 0.48 ± 0.0
0.0HisCys: 0.0 ± 0.0
0.0HisAsp: 0.0 ± 0.0
1.439HisGlu: 1.439 ± 0.0
0.0HisPhe: 0.0 ± 0.0
0.959HisGly: 0.959 ± 0.0
0.0HisHis: 0.0 ± 0.0
0.48HisIle: 0.48 ± 0.0
0.0HisLys: 0.0 ± 0.0
0.48HisLeu: 0.48 ± 0.0
0.959HisMet: 0.959 ± 0.0
0.0HisAsn: 0.0 ± 0.0
0.959HisPro: 0.959 ± 0.0
0.48HisGln: 0.48 ± 0.0
0.48HisArg: 0.48 ± 0.0
1.918HisSer: 1.918 ± 0.0
0.0HisThr: 0.0 ± 0.0
0.48HisVal: 0.48 ± 0.0
1.918HisTrp: 1.918 ± 0.0
0.959HisTyr: 0.959 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.878IleAla: 2.878 ± 0.0
0.48IleCys: 0.48 ± 0.0
3.837IleAsp: 3.837 ± 0.0
5.276IleGlu: 5.276 ± 0.0
3.357IlePhe: 3.357 ± 0.0
3.837IleGly: 3.837 ± 0.0
1.439IleHis: 1.439 ± 0.0
1.439IleIle: 1.439 ± 0.0
3.837IleLys: 3.837 ± 0.0
3.357IleLeu: 3.357 ± 0.0
0.48IleMet: 0.48 ± 0.0
2.878IleAsn: 2.878 ± 0.0
3.837IlePro: 3.837 ± 0.0
2.878IleGln: 2.878 ± 0.0
3.837IleArg: 3.837 ± 0.0
3.837IleSer: 3.837 ± 0.0
2.878IleThr: 2.878 ± 0.0
2.878IleVal: 2.878 ± 0.0
0.48IleTrp: 0.48 ± 0.0
0.959IleTyr: 0.959 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.317LysAla: 4.317 ± 0.0
0.959LysCys: 0.959 ± 0.0
4.317LysAsp: 4.317 ± 0.0
3.357LysGlu: 3.357 ± 0.0
1.918LysPhe: 1.918 ± 0.0
6.235LysGly: 6.235 ± 0.0
0.48LysHis: 0.48 ± 0.0
3.837LysIle: 3.837 ± 0.0
2.398LysLys: 2.398 ± 0.0
5.755LysLeu: 5.755 ± 0.0
3.837LysMet: 3.837 ± 0.0
2.398LysAsn: 2.398 ± 0.0
1.918LysPro: 1.918 ± 0.0
1.918LysGln: 1.918 ± 0.0
7.194LysArg: 7.194 ± 0.0
4.317LysSer: 4.317 ± 0.0
5.755LysThr: 5.755 ± 0.0
3.837LysVal: 3.837 ± 0.0
2.878LysTrp: 2.878 ± 0.0
1.439LysTyr: 1.439 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
4.796LeuAla: 4.796 ± 0.0
0.48LeuCys: 0.48 ± 0.0
4.796LeuAsp: 4.796 ± 0.0
8.153LeuGlu: 8.153 ± 0.0
4.796LeuPhe: 4.796 ± 0.0
6.235LeuGly: 6.235 ± 0.0
0.959LeuHis: 0.959 ± 0.0
6.715LeuIle: 6.715 ± 0.0
7.194LeuLys: 7.194 ± 0.0
7.194LeuLeu: 7.194 ± 0.0
1.918LeuMet: 1.918 ± 0.0
3.837LeuAsn: 3.837 ± 0.0
3.357LeuPro: 3.357 ± 0.0
2.878LeuGln: 2.878 ± 0.0
7.194LeuArg: 7.194 ± 0.0
7.194LeuSer: 7.194 ± 0.0
3.837LeuThr: 3.837 ± 0.0
6.235LeuVal: 6.235 ± 0.0
1.918LeuTrp: 1.918 ± 0.0
1.918LeuTyr: 1.918 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
4.317MetAla: 4.317 ± 0.0
0.48MetCys: 0.48 ± 0.0
2.398MetAsp: 2.398 ± 0.0
2.398MetGlu: 2.398 ± 0.0
0.48MetPhe: 0.48 ± 0.0
1.439MetGly: 1.439 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.48MetIle: 0.48 ± 0.0
3.837MetLys: 3.837 ± 0.0
2.398MetLeu: 2.398 ± 0.0
1.439MetMet: 1.439 ± 0.0
1.439MetAsn: 1.439 ± 0.0
0.959MetPro: 0.959 ± 0.0
1.918MetGln: 1.918 ± 0.0
1.918MetArg: 1.918 ± 0.0
2.398MetSer: 2.398 ± 0.0
2.398MetThr: 2.398 ± 0.0
1.439MetVal: 1.439 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.959MetTyr: 0.959 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.918AsnAla: 1.918 ± 0.0
0.48AsnCys: 0.48 ± 0.0
2.878AsnAsp: 2.878 ± 0.0
1.918AsnGlu: 1.918 ± 0.0
2.398AsnPhe: 2.398 ± 0.0
1.439AsnGly: 1.439 ± 0.0
0.959AsnHis: 0.959 ± 0.0
0.48AsnIle: 0.48 ± 0.0
2.398AsnLys: 2.398 ± 0.0
4.317AsnLeu: 4.317 ± 0.0
0.959AsnMet: 0.959 ± 0.0
0.0AsnAsn: 0.0 ± 0.0
1.918AsnPro: 1.918 ± 0.0
0.959AsnGln: 0.959 ± 0.0
0.959AsnArg: 0.959 ± 0.0
2.878AsnSer: 2.878 ± 0.0
1.439AsnThr: 1.439 ± 0.0
3.837AsnVal: 3.837 ± 0.0
0.959AsnTrp: 0.959 ± 0.0
1.918AsnTyr: 1.918 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
0.959ProAla: 0.959 ± 0.0
0.0ProCys: 0.0 ± 0.0
0.959ProAsp: 0.959 ± 0.0
2.878ProGlu: 2.878 ± 0.0
1.918ProPhe: 1.918 ± 0.0
2.878ProGly: 2.878 ± 0.0
0.0ProHis: 0.0 ± 0.0
0.959ProIle: 0.959 ± 0.0
3.357ProLys: 3.357 ± 0.0
1.439ProLeu: 1.439 ± 0.0
1.918ProMet: 1.918 ± 0.0
1.439ProAsn: 1.439 ± 0.0
0.0ProPro: 0.0 ± 0.0
0.959ProGln: 0.959 ± 0.0
2.398ProArg: 2.398 ± 0.0
2.398ProSer: 2.398 ± 0.0
2.398ProThr: 2.398 ± 0.0
1.439ProVal: 1.439 ± 0.0
0.48ProTrp: 0.48 ± 0.0
1.918ProTyr: 1.918 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.398GlnAla: 2.398 ± 0.0
0.959GlnCys: 0.959 ± 0.0
0.959GlnAsp: 0.959 ± 0.0
0.959GlnGlu: 0.959 ± 0.0
0.48GlnPhe: 0.48 ± 0.0
1.439GlnGly: 1.439 ± 0.0
2.398GlnHis: 2.398 ± 0.0
0.48GlnIle: 0.48 ± 0.0
1.918GlnLys: 1.918 ± 0.0
2.398GlnLeu: 2.398 ± 0.0
0.48GlnMet: 0.48 ± 0.0
0.959GlnAsn: 0.959 ± 0.0
0.48GlnPro: 0.48 ± 0.0
0.959GlnGln: 0.959 ± 0.0
1.918GlnArg: 1.918 ± 0.0
1.918GlnSer: 1.918 ± 0.0
3.837GlnThr: 3.837 ± 0.0
1.918GlnVal: 1.918 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
0.48GlnTyr: 0.48 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.317ArgAla: 4.317 ± 0.0
0.48ArgCys: 0.48 ± 0.0
4.796ArgAsp: 4.796 ± 0.0
6.715ArgGlu: 6.715 ± 0.0
0.0ArgPhe: 0.0 ± 0.0
3.357ArgGly: 3.357 ± 0.0
0.959ArgHis: 0.959 ± 0.0
1.918ArgIle: 1.918 ± 0.0
3.837ArgLys: 3.837 ± 0.0
6.235ArgLeu: 6.235 ± 0.0
0.959ArgMet: 0.959 ± 0.0
0.959ArgAsn: 0.959 ± 0.0
0.959ArgPro: 0.959 ± 0.0
1.918ArgGln: 1.918 ± 0.0
4.796ArgArg: 4.796 ± 0.0
4.317ArgSer: 4.317 ± 0.0
4.317ArgThr: 4.317 ± 0.0
8.153ArgVal: 8.153 ± 0.0
2.878ArgTrp: 2.878 ± 0.0
1.918ArgTyr: 1.918 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.317SerAla: 4.317 ± 0.0
0.48SerCys: 0.48 ± 0.0
4.796SerAsp: 4.796 ± 0.0
6.715SerGlu: 6.715 ± 0.0
5.755SerPhe: 5.755 ± 0.0
3.357SerGly: 3.357 ± 0.0
0.0SerHis: 0.0 ± 0.0
5.755SerIle: 5.755 ± 0.0
5.755SerLys: 5.755 ± 0.0
7.674SerLeu: 7.674 ± 0.0
0.959SerMet: 0.959 ± 0.0
2.878SerAsn: 2.878 ± 0.0
1.439SerPro: 1.439 ± 0.0
1.918SerGln: 1.918 ± 0.0
3.837SerArg: 3.837 ± 0.0
7.674SerSer: 7.674 ± 0.0
6.235SerThr: 6.235 ± 0.0
7.674SerVal: 7.674 ± 0.0
0.959SerTrp: 0.959 ± 0.0
1.439SerTyr: 1.439 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.878ThrAla: 2.878 ± 0.0
1.439ThrCys: 1.439 ± 0.0
2.398ThrAsp: 2.398 ± 0.0
4.317ThrGlu: 4.317 ± 0.0
1.918ThrPhe: 1.918 ± 0.0
3.357ThrGly: 3.357 ± 0.0
0.959ThrHis: 0.959 ± 0.0
5.276ThrIle: 5.276 ± 0.0
5.755ThrLys: 5.755 ± 0.0
5.755ThrLeu: 5.755 ± 0.0
2.398ThrMet: 2.398 ± 0.0
0.959ThrAsn: 0.959 ± 0.0
2.398ThrPro: 2.398 ± 0.0
0.959ThrGln: 0.959 ± 0.0
3.837ThrArg: 3.837 ± 0.0
3.357ThrSer: 3.357 ± 0.0
3.837ThrThr: 3.837 ± 0.0
5.755ThrVal: 5.755 ± 0.0
0.959ThrTrp: 0.959 ± 0.0
0.48ThrTyr: 0.48 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.715ValAla: 6.715 ± 0.0
0.48ValCys: 0.48 ± 0.0
5.276ValAsp: 5.276 ± 0.0
7.194ValGlu: 7.194 ± 0.0
2.398ValPhe: 2.398 ± 0.0
4.796ValGly: 4.796 ± 0.0
0.48ValHis: 0.48 ± 0.0
4.796ValIle: 4.796 ± 0.0
5.276ValLys: 5.276 ± 0.0
6.235ValLeu: 6.235 ± 0.0
1.918ValMet: 1.918 ± 0.0
1.439ValAsn: 1.439 ± 0.0
0.48ValPro: 0.48 ± 0.0
0.48ValGln: 0.48 ± 0.0
5.755ValArg: 5.755 ± 0.0
7.674ValSer: 7.674 ± 0.0
2.878ValThr: 2.878 ± 0.0
5.276ValVal: 5.276 ± 0.0
2.398ValTrp: 2.398 ± 0.0
0.959ValTyr: 0.959 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.959TrpAla: 0.959 ± 0.0
0.0TrpCys: 0.0 ± 0.0
2.398TrpAsp: 2.398 ± 0.0
1.918TrpGlu: 1.918 ± 0.0
0.48TrpPhe: 0.48 ± 0.0
0.48TrpGly: 0.48 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.439TrpIle: 1.439 ± 0.0
0.959TrpLys: 0.959 ± 0.0
3.837TrpLeu: 3.837 ± 0.0
0.48TrpMet: 0.48 ± 0.0
0.959TrpAsn: 0.959 ± 0.0
0.48TrpPro: 0.48 ± 0.0
0.959TrpGln: 0.959 ± 0.0
0.959TrpArg: 0.959 ± 0.0
2.398TrpSer: 2.398 ± 0.0
0.959TrpThr: 0.959 ± 0.0
1.918TrpVal: 1.918 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.398TyrAla: 2.398 ± 0.0
0.0TyrCys: 0.0 ± 0.0
1.439TyrAsp: 1.439 ± 0.0
2.398TyrGlu: 2.398 ± 0.0
0.959TyrPhe: 0.959 ± 0.0
1.918TyrGly: 1.918 ± 0.0
0.0TyrHis: 0.0 ± 0.0
2.398TyrIle: 2.398 ± 0.0
2.398TyrLys: 2.398 ± 0.0
2.878TyrLeu: 2.878 ± 0.0
0.959TyrMet: 0.959 ± 0.0
0.48TyrAsn: 0.48 ± 0.0
0.48TyrPro: 0.48 ± 0.0
1.439TyrGln: 1.439 ± 0.0
2.398TyrArg: 2.398 ± 0.0
1.439TyrSer: 1.439 ± 0.0
0.48TyrThr: 0.48 ± 0.0
1.439TyrVal: 1.439 ± 0.0
0.48TyrTrp: 0.48 ± 0.0
0.959TyrTyr: 0.959 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2086 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski