Erinaceus europaeus papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoetapapillomavirus; Dyoetapapillomavirus 1

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B7TQP2|B7TQP2_9PAPI Minor capsid protein L2 OS=Erinaceus europaeus papillomavirus 1 OX=445217 GN=L2 PE=3 SV=1
MM1 pKa = 7.26ARR3 pKa = 11.84SRR5 pKa = 11.84RR6 pKa = 11.84TKK8 pKa = 10.16RR9 pKa = 11.84ASAQDD14 pKa = 3.87LYY16 pKa = 11.2KK17 pKa = 10.69SCLSGGDD24 pKa = 3.86CPPDD28 pKa = 3.34VKK30 pKa = 10.92NKK32 pKa = 10.19YY33 pKa = 7.32EE34 pKa = 4.07QNTTADD40 pKa = 4.17KK41 pKa = 10.18ILKK44 pKa = 9.13YY45 pKa = 10.75GSTAVYY51 pKa = 10.09FGGLGIGTGKK61 pKa = 8.82GTGGVTGYY69 pKa = 8.86TPLGGGEE76 pKa = 4.15GPVRR80 pKa = 11.84VGVPRR85 pKa = 11.84VLRR88 pKa = 11.84PALATDD94 pKa = 4.08LVGPLDD100 pKa = 4.04IAPVDD105 pKa = 3.79AGVGANDD112 pKa = 4.01PSVITLTDD120 pKa = 3.11STLSVDD126 pKa = 3.6VGPGEE131 pKa = 4.26VEE133 pKa = 4.4VVAEE137 pKa = 3.99IHH139 pKa = 6.19PVPDD143 pKa = 3.32TSTTTTGSGQGTSAVLEE160 pKa = 4.22ITPEE164 pKa = 3.79ATPGKK169 pKa = 9.74VRR171 pKa = 11.84VSRR174 pKa = 11.84TQYY177 pKa = 10.34HH178 pKa = 5.77NPAFHH183 pKa = 7.44ILTTSTPIGGEE194 pKa = 3.8TSAVDD199 pKa = 3.42NVFVDD204 pKa = 4.89FGSPSGHH211 pKa = 5.98IVGADD216 pKa = 3.15GVEE219 pKa = 4.34VYY221 pKa = 10.82EE222 pKa = 4.77EE223 pKa = 4.42IPLEE227 pKa = 3.92PLNRR231 pKa = 11.84SEE233 pKa = 5.98FEE235 pKa = 4.32IEE237 pKa = 3.91EE238 pKa = 4.05QTPKK242 pKa = 10.87SSTPKK247 pKa = 10.35ILDD250 pKa = 3.97TIADD254 pKa = 4.16SVRR257 pKa = 11.84KK258 pKa = 9.53FYY260 pKa = 11.07NRR262 pKa = 11.84RR263 pKa = 11.84IQQIKK268 pKa = 7.94TSDD271 pKa = 3.42YY272 pKa = 10.93RR273 pKa = 11.84FLSSPGKK280 pKa = 10.39LVDD283 pKa = 4.01ASFINPAYY291 pKa = 10.59DD292 pKa = 3.68PDD294 pKa = 3.71EE295 pKa = 4.23TLVFDD300 pKa = 3.88TDD302 pKa = 3.43INEE305 pKa = 4.17VQMAPNPDD313 pKa = 3.45FQDD316 pKa = 2.64IRR318 pKa = 11.84VLNRR322 pKa = 11.84PMFSTKK328 pKa = 9.67EE329 pKa = 3.8GYY331 pKa = 9.81IRR333 pKa = 11.84VSRR336 pKa = 11.84LGNRR340 pKa = 11.84GTIRR344 pKa = 11.84TRR346 pKa = 11.84SGTQIGAQVHH356 pKa = 6.09FFQDD360 pKa = 3.77LSSIDD365 pKa = 3.65AEE367 pKa = 4.43EE368 pKa = 4.3GLEE371 pKa = 4.03LALLGQHH378 pKa = 6.43SGDD381 pKa = 3.45ASIVQAQAEE390 pKa = 4.84SVFLGDD396 pKa = 4.51GLHH399 pKa = 7.4PDD401 pKa = 3.42TDD403 pKa = 4.72SNLSLLDD410 pKa = 3.46EE411 pKa = 4.45FAEE414 pKa = 4.71DD415 pKa = 4.6FSHH418 pKa = 6.22SQLIIGEE425 pKa = 4.17RR426 pKa = 11.84KK427 pKa = 9.46ANQVSLPDD435 pKa = 3.84FASPKK440 pKa = 7.8YY441 pKa = 10.58SKK443 pKa = 11.19YY444 pKa = 10.5FLQDD448 pKa = 3.1YY449 pKa = 10.64GNGFIVSHH457 pKa = 6.48PMQTEE462 pKa = 3.92RR463 pKa = 11.84PEE465 pKa = 4.72IIHH468 pKa = 6.95PDD470 pKa = 2.91IDD472 pKa = 3.95AGPTIVIEE480 pKa = 4.58AFDD483 pKa = 3.84SSGGFYY489 pKa = 10.3LHH491 pKa = 7.23PSFVGKK497 pKa = 9.65KK498 pKa = 9.07RR499 pKa = 11.84KK500 pKa = 9.34RR501 pKa = 11.84LYY503 pKa = 10.69FLL505 pKa = 4.65

Molecular weight: 54.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B7TQP1|B7TQP1_9PAPI E4 (Fragment) OS=Erinaceus europaeus papillomavirus 1 OX=445217 GN=E4 PE=4 SV=1
MM1 pKa = 7.48EE2 pKa = 6.16RR3 pKa = 11.84LTQRR7 pKa = 11.84FDD9 pKa = 3.36ALQEE13 pKa = 3.94KK14 pKa = 10.44LMEE17 pKa = 4.82IYY19 pKa = 10.61EE20 pKa = 4.32KK21 pKa = 10.62DD22 pKa = 3.66SRR24 pKa = 11.84DD25 pKa = 3.6LGVMTSHH32 pKa = 7.53WALQRR37 pKa = 11.84EE38 pKa = 4.6EE39 pKa = 4.09QALLHH44 pKa = 5.55CARR47 pKa = 11.84RR48 pKa = 11.84KK49 pKa = 9.58GVLRR53 pKa = 11.84VGFQPVPPLKK63 pKa = 10.74VSEE66 pKa = 4.44QKK68 pKa = 10.92AKK70 pKa = 10.75AAIEE74 pKa = 3.94MHH76 pKa = 6.32LTLQSLQKK84 pKa = 10.15SAYY87 pKa = 10.21SNEE90 pKa = 3.87DD91 pKa = 2.57WTLSQTSRR99 pKa = 11.84EE100 pKa = 4.19SFMTPPRR107 pKa = 11.84HH108 pKa = 5.78CFKK111 pKa = 10.9KK112 pKa = 9.91QGHH115 pKa = 4.64TVEE118 pKa = 4.25VTFDD122 pKa = 3.74GEE124 pKa = 4.63SANSMLYY131 pKa = 9.2TMWGRR136 pKa = 11.84VYY138 pKa = 10.99YY139 pKa = 10.93QMDD142 pKa = 4.01DD143 pKa = 4.01GSWSVASSGVDD154 pKa = 3.19YY155 pKa = 11.49YY156 pKa = 11.47GIYY159 pKa = 10.85YY160 pKa = 9.91NDD162 pKa = 3.87SEE164 pKa = 4.82GKK166 pKa = 7.3PHH168 pKa = 6.73YY169 pKa = 9.18YY170 pKa = 10.67VKK172 pKa = 10.45FAEE175 pKa = 4.62DD176 pKa = 3.16AQKK179 pKa = 10.97YY180 pKa = 9.54SKK182 pKa = 9.8TGTWFVRR189 pKa = 11.84SNDD192 pKa = 3.47KK193 pKa = 10.4TISAPVTSTCTSPTTRR209 pKa = 11.84DD210 pKa = 3.04RR211 pKa = 11.84SRR213 pKa = 11.84SPRR216 pKa = 11.84RR217 pKa = 11.84HH218 pKa = 5.09TEE220 pKa = 4.02EE221 pKa = 4.12VDD223 pKa = 3.29STTPPGRR230 pKa = 11.84RR231 pKa = 11.84YY232 pKa = 9.67PPSSPPSVSSLRR244 pKa = 11.84LRR246 pKa = 11.84GRR248 pKa = 11.84GGGEE252 pKa = 3.69GEE254 pKa = 4.35YY255 pKa = 10.79YY256 pKa = 10.21PFGRR260 pKa = 11.84SSPSEE265 pKa = 4.08DD266 pKa = 3.06RR267 pKa = 11.84CGSAGSPARR276 pKa = 11.84PVGRR280 pKa = 11.84RR281 pKa = 11.84PPHH284 pKa = 6.45CPQGTPAEE292 pKa = 4.21ASHH295 pKa = 6.54RR296 pKa = 11.84LLWGPRR302 pKa = 11.84DD303 pKa = 3.67PTVLVAKK310 pKa = 10.54GDD312 pKa = 4.14ANTLKK317 pKa = 10.4CWRR320 pKa = 11.84NRR322 pKa = 11.84CRR324 pKa = 11.84KK325 pKa = 6.46THH327 pKa = 6.4AGSFIAFSTTWQWCGDD343 pKa = 3.69GNCRR347 pKa = 11.84QGRR350 pKa = 11.84HH351 pKa = 5.21RR352 pKa = 11.84LQILFSSSQQLDD364 pKa = 3.32QFLGKK369 pKa = 10.54VKK371 pKa = 10.16VPKK374 pKa = 10.09GVEE377 pKa = 3.83VHH379 pKa = 6.96RR380 pKa = 11.84STFDD384 pKa = 3.2GLL386 pKa = 3.71

Molecular weight: 43.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2282

54

597

326.0

36.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.135 ± 0.148

2.323 ± 0.76

6.442 ± 0.533

5.96 ± 0.422

4.426 ± 0.331

6.968 ± 0.986

1.884 ± 0.306

4.426 ± 0.594

5.741 ± 0.602

8.94 ± 0.996

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.753 ± 0.291

3.812 ± 0.931

5.434 ± 0.874

4.294 ± 0.196

6.004 ± 0.786

7.581 ± 0.968

6.573 ± 0.403

6.529 ± 0.382

1.446 ± 0.408

3.33 ± 0.196
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski