Equus caballus papillomavirus 2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoiotapapillomavirus; Dyoiotapapillomavirus 1

Average proteome isoelectric point is 6.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C0ITA7|C0ITA7_9PAPI Putative E1 OS=Equus caballus papillomavirus 2 OX=526413 PE=4 SV=1
MM1 pKa = 7.75RR2 pKa = 11.84GLHH5 pKa = 6.61RR6 pKa = 11.84LLPDD10 pKa = 3.28VVLDD14 pKa = 3.92ALSSITLAEE23 pKa = 4.16RR24 pKa = 11.84SPSVSSSDD32 pKa = 3.66TEE34 pKa = 4.6DD35 pKa = 5.42EE36 pKa = 3.94EE37 pKa = 4.45DD38 pKa = 3.91QPDD41 pKa = 3.62GGAQRR46 pKa = 11.84VAEE49 pKa = 4.27EE50 pKa = 4.11DD51 pKa = 3.86LEE53 pKa = 4.79VEE55 pKa = 4.62VVPRR59 pKa = 11.84EE60 pKa = 4.07HH61 pKa = 6.19PQFRR65 pKa = 11.84VLTLCEE71 pKa = 3.68RR72 pKa = 11.84CNRR75 pKa = 11.84GVRR78 pKa = 11.84LVVVGPTGDD87 pKa = 3.54VRR89 pKa = 11.84ILQQLLLGSLGIVCADD105 pKa = 3.76CASQEE110 pKa = 3.93GHH112 pKa = 6.38NGHH115 pKa = 6.12GQQ117 pKa = 3.03

Molecular weight: 12.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C0ITA6|C0ITA6_9PAPI Protein E7 OS=Equus caballus papillomavirus 2 OX=526413 GN=E7 PE=3 SV=1
MM1 pKa = 7.98PSRR4 pKa = 11.84PVPAKK9 pKa = 10.79SFGALFWLLWRR20 pKa = 11.84CTQPICRR27 pKa = 11.84LGLCEE32 pKa = 3.89SANPLRR38 pKa = 11.84CTEE41 pKa = 3.89PFSRR45 pKa = 11.84EE46 pKa = 4.17DD47 pKa = 3.27CCGPQSLRR55 pKa = 11.84YY56 pKa = 9.88AGGPCIGDD64 pKa = 3.31VPRR67 pKa = 11.84SSRR70 pKa = 11.84GRR72 pKa = 11.84VKK74 pKa = 9.99TAGHH78 pKa = 5.6MSIVGLLCIFCGKK91 pKa = 8.88PCGYY95 pKa = 10.94ADD97 pKa = 5.19DD98 pKa = 4.54IWWNTADD105 pKa = 4.37LNLVMRR111 pKa = 11.84DD112 pKa = 3.6GKK114 pKa = 10.76RR115 pKa = 11.84KK116 pKa = 9.8ASCQTCMRR124 pKa = 11.84AACRR128 pKa = 11.84LEE130 pKa = 3.56RR131 pKa = 11.84HH132 pKa = 6.6LYY134 pKa = 8.19QSSRR138 pKa = 11.84NVYY141 pKa = 6.53TARR144 pKa = 11.84GVEE147 pKa = 4.29RR148 pKa = 11.84ACGQSVYY155 pKa = 10.04RR156 pKa = 11.84VSVRR160 pKa = 11.84CTHH163 pKa = 6.09CGKK166 pKa = 10.53RR167 pKa = 11.84LTRR170 pKa = 11.84DD171 pKa = 3.06EE172 pKa = 4.38KK173 pKa = 10.7RR174 pKa = 11.84WIEE177 pKa = 3.65IEE179 pKa = 3.98GAGFYY184 pKa = 8.33QVRR187 pKa = 11.84QRR189 pKa = 11.84WRR191 pKa = 11.84ALCYY195 pKa = 10.07DD196 pKa = 4.1CRR198 pKa = 11.84VCDD201 pKa = 3.88EE202 pKa = 4.58GSAA205 pKa = 3.53

Molecular weight: 23.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2200

117

519

366.7

40.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.045 ± 0.553

2.5 ± 0.909

5.591 ± 0.282

5.227 ± 0.406

4.591 ± 0.54

9.318 ± 1.718

2.5 ± 0.367

2.409 ± 0.409

4.091 ± 0.909

8.455 ± 0.719

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.227 ± 0.548

3.227 ± 0.745

6.682 ± 0.604

4.182 ± 0.215

7.227 ± 0.68

7.636 ± 0.778

5.182 ± 0.262

7.955 ± 0.781

1.455 ± 0.454

2.5 ± 0.438
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski