Amino acid dipepetide frequency for Oryza sativa endornavirus (isolate Japan/1995) (OsEV)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
0.219AlaAla: 0.219 ± 0.0
0.656AlaCys: 0.656 ± 0.0
1.094AlaAsp: 1.094 ± 0.0
1.313AlaGlu: 1.313 ± 0.0
1.094AlaPhe: 1.094 ± 0.0
0.875AlaGly: 0.875 ± 0.0
0.438AlaHis: 0.438 ± 0.0
2.406AlaIle: 2.406 ± 0.0
1.969AlaLys: 1.969 ± 0.0
5.469AlaLeu: 5.469 ± 0.0
1.094AlaMet: 1.094 ± 0.0
1.313AlaAsn: 1.313 ± 0.0
0.875AlaPro: 0.875 ± 0.0
0.219AlaGln: 0.219 ± 0.0
1.531AlaArg: 1.531 ± 0.0
2.406AlaSer: 2.406 ± 0.0
1.531AlaThr: 1.531 ± 0.0
1.531AlaVal: 1.531 ± 0.0
0.438AlaTrp: 0.438 ± 0.0
0.875AlaTyr: 0.875 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.219CysAla: 0.219 ± 0.0
1.094CysCys: 1.094 ± 0.0
0.875CysAsp: 0.875 ± 0.0
2.188CysGlu: 2.188 ± 0.0
1.094CysPhe: 1.094 ± 0.0
0.656CysGly: 0.656 ± 0.0
0.875CysHis: 0.875 ± 0.0
1.969CysIle: 1.969 ± 0.0
2.625CysLys: 2.625 ± 0.0
1.75CysLeu: 1.75 ± 0.0
0.656CysMet: 0.656 ± 0.0
1.094CysAsn: 1.094 ± 0.0
1.094CysPro: 1.094 ± 0.0
0.219CysGln: 0.219 ± 0.0
0.875CysArg: 0.875 ± 0.0
2.406CysSer: 2.406 ± 0.0
1.094CysThr: 1.094 ± 0.0
1.75CysVal: 1.75 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.656CysTyr: 0.656 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
1.313AspAla: 1.313 ± 0.0
0.219AspCys: 0.219 ± 0.0
7.219AspAsp: 7.219 ± 0.0
4.813AspGlu: 4.813 ± 0.0
1.75AspPhe: 1.75 ± 0.0
2.844AspGly: 2.844 ± 0.0
1.094AspHis: 1.094 ± 0.0
5.032AspIle: 5.032 ± 0.0
6.563AspLys: 6.563 ± 0.0
8.751AspLeu: 8.751 ± 0.0
2.406AspMet: 2.406 ± 0.0
5.469AspAsn: 5.469 ± 0.0
1.094AspPro: 1.094 ± 0.0
0.875AspGln: 0.875 ± 0.0
3.282AspArg: 3.282 ± 0.0
3.5AspSer: 3.5 ± 0.0
4.157AspThr: 4.157 ± 0.0
4.375AspVal: 4.375 ± 0.0
1.094AspTrp: 1.094 ± 0.0
1.531AspTyr: 1.531 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
1.531GluAla: 1.531 ± 0.0
1.094GluCys: 1.094 ± 0.0
3.719GluAsp: 3.719 ± 0.0
4.594GluGlu: 4.594 ± 0.0
3.282GluPhe: 3.282 ± 0.0
2.625GluGly: 2.625 ± 0.0
1.313GluHis: 1.313 ± 0.0
5.469GluIle: 5.469 ± 0.0
4.813GluLys: 4.813 ± 0.0
6.782GluLeu: 6.782 ± 0.0
3.5GluMet: 3.5 ± 0.0
4.375GluAsn: 4.375 ± 0.0
1.969GluPro: 1.969 ± 0.0
1.313GluGln: 1.313 ± 0.0
1.75GluArg: 1.75 ± 0.0
3.719GluSer: 3.719 ± 0.0
2.406GluThr: 2.406 ± 0.0
3.938GluVal: 3.938 ± 0.0
0.438GluTrp: 0.438 ± 0.0
2.406GluTyr: 2.406 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.313PheAla: 1.313 ± 0.0
0.438PheCys: 0.438 ± 0.0
2.625PheAsp: 2.625 ± 0.0
3.282PheGlu: 3.282 ± 0.0
0.656PhePhe: 0.656 ± 0.0
2.844PheGly: 2.844 ± 0.0
1.531PheHis: 1.531 ± 0.0
2.406PheIle: 2.406 ± 0.0
3.5PheLys: 3.5 ± 0.0
1.969PheLeu: 1.969 ± 0.0
0.656PheMet: 0.656 ± 0.0
4.157PheAsn: 4.157 ± 0.0
0.656PhePro: 0.656 ± 0.0
0.875PheGln: 0.875 ± 0.0
2.188PheArg: 2.188 ± 0.0
3.5PheSer: 3.5 ± 0.0
1.75PheThr: 1.75 ± 0.0
2.844PheVal: 2.844 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.531PheTyr: 1.531 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
1.75GlyAla: 1.75 ± 0.0
0.875GlyCys: 0.875 ± 0.0
3.938GlyAsp: 3.938 ± 0.0
2.625GlyGlu: 2.625 ± 0.0
1.75GlyPhe: 1.75 ± 0.0
1.969GlyGly: 1.969 ± 0.0
0.875GlyHis: 0.875 ± 0.0
3.938GlyIle: 3.938 ± 0.0
5.25GlyLys: 5.25 ± 0.0
3.938GlyLeu: 3.938 ± 0.0
1.094GlyMet: 1.094 ± 0.0
2.625GlyAsn: 2.625 ± 0.0
1.75GlyPro: 1.75 ± 0.0
0.875GlyGln: 0.875 ± 0.0
1.969GlyArg: 1.969 ± 0.0
2.406GlySer: 2.406 ± 0.0
2.625GlyThr: 2.625 ± 0.0
2.844GlyVal: 2.844 ± 0.0
1.75GlyTrp: 1.75 ± 0.0
2.188GlyTyr: 2.188 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
1.313HisCys: 1.313 ± 0.0
1.75HisAsp: 1.75 ± 0.0
1.531HisGlu: 1.531 ± 0.0
0.656HisPhe: 0.656 ± 0.0
1.313HisGly: 1.313 ± 0.0
1.313HisHis: 1.313 ± 0.0
3.282HisIle: 3.282 ± 0.0
1.75HisLys: 1.75 ± 0.0
1.969HisLeu: 1.969 ± 0.0
0.219HisMet: 0.219 ± 0.0
3.5HisAsn: 3.5 ± 0.0
0.438HisPro: 0.438 ± 0.0
0.438HisGln: 0.438 ± 0.0
0.656HisArg: 0.656 ± 0.0
1.531HisSer: 1.531 ± 0.0
1.75HisThr: 1.75 ± 0.0
1.531HisVal: 1.531 ± 0.0
0.438HisTrp: 0.438 ± 0.0
1.094HisTyr: 1.094 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.188IleAla: 2.188 ± 0.0
2.188IleCys: 2.188 ± 0.0
5.032IleAsp: 5.032 ± 0.0
3.719IleGlu: 3.719 ± 0.0
2.188IlePhe: 2.188 ± 0.0
3.719IleGly: 3.719 ± 0.0
1.531IleHis: 1.531 ± 0.0
7.876IleIle: 7.876 ± 0.0
7.438IleLys: 7.438 ± 0.0
6.563IleLeu: 6.563 ± 0.0
2.625IleMet: 2.625 ± 0.0
5.688IleAsn: 5.688 ± 0.0
3.063IlePro: 3.063 ± 0.0
3.063IleGln: 3.063 ± 0.0
2.844IleArg: 2.844 ± 0.0
7.876IleSer: 7.876 ± 0.0
7.657IleThr: 7.657 ± 0.0
6.344IleVal: 6.344 ± 0.0
0.438IleTrp: 0.438 ± 0.0
2.844IleTyr: 2.844 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
1.969LysAla: 1.969 ± 0.0
1.75LysCys: 1.75 ± 0.0
5.469LysAsp: 5.469 ± 0.0
6.563LysGlu: 6.563 ± 0.0
6.344LysPhe: 6.344 ± 0.0
3.5LysGly: 3.5 ± 0.0
1.969LysHis: 1.969 ± 0.0
7.438LysIle: 7.438 ± 0.0
1.969LysLys: 1.969 ± 0.0
8.095LysLeu: 8.095 ± 0.0
0.875LysMet: 0.875 ± 0.0
4.813LysAsn: 4.813 ± 0.0
3.938LysPro: 3.938 ± 0.0
2.844LysGln: 2.844 ± 0.0
2.844LysArg: 2.844 ± 0.0
3.719LysSer: 3.719 ± 0.0
4.375LysThr: 4.375 ± 0.0
2.844LysVal: 2.844 ± 0.0
1.969LysTrp: 1.969 ± 0.0
4.375LysTyr: 4.375 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
3.938LeuAla: 3.938 ± 0.0
2.188LeuCys: 2.188 ± 0.0
5.469LeuAsp: 5.469 ± 0.0
6.126LeuGlu: 6.126 ± 0.0
4.157LeuPhe: 4.157 ± 0.0
6.126LeuGly: 6.126 ± 0.0
1.969LeuHis: 1.969 ± 0.0
6.782LeuIle: 6.782 ± 0.0
8.313LeuLys: 8.313 ± 0.0
8.095LeuLeu: 8.095 ± 0.0
2.406LeuMet: 2.406 ± 0.0
7.001LeuAsn: 7.001 ± 0.0
4.813LeuPro: 4.813 ± 0.0
2.188LeuGln: 2.188 ± 0.0
4.375LeuArg: 4.375 ± 0.0
7.657LeuSer: 7.657 ± 0.0
6.344LeuThr: 6.344 ± 0.0
3.938LeuVal: 3.938 ± 0.0
1.75LeuTrp: 1.75 ± 0.0
3.063LeuTyr: 3.063 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.219MetAla: 0.219 ± 0.0
0.875MetCys: 0.875 ± 0.0
1.313MetAsp: 1.313 ± 0.0
1.313MetGlu: 1.313 ± 0.0
0.875MetPhe: 0.875 ± 0.0
2.188MetGly: 2.188 ± 0.0
0.219MetHis: 0.219 ± 0.0
1.75MetIle: 1.75 ± 0.0
2.625MetLys: 2.625 ± 0.0
2.406MetLeu: 2.406 ± 0.0
1.313MetMet: 1.313 ± 0.0
2.188MetAsn: 2.188 ± 0.0
2.188MetPro: 2.188 ± 0.0
0.875MetGln: 0.875 ± 0.0
1.531MetArg: 1.531 ± 0.0
2.625MetSer: 2.625 ± 0.0
1.969MetThr: 1.969 ± 0.0
1.094MetVal: 1.094 ± 0.0
0.0MetTrp: 0.0 ± 0.0
2.188MetTyr: 2.188 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.969AsnAla: 1.969 ± 0.0
2.406AsnCys: 2.406 ± 0.0
5.25AsnAsp: 5.25 ± 0.0
3.719AsnGlu: 3.719 ± 0.0
3.282AsnPhe: 3.282 ± 0.0
1.969AsnGly: 1.969 ± 0.0
1.531AsnHis: 1.531 ± 0.0
4.813AsnIle: 4.813 ± 0.0
7.001AsnLys: 7.001 ± 0.0
6.782AsnLeu: 6.782 ± 0.0
2.188AsnMet: 2.188 ± 0.0
3.719AsnAsn: 3.719 ± 0.0
3.5AsnPro: 3.5 ± 0.0
2.406AsnGln: 2.406 ± 0.0
2.844AsnArg: 2.844 ± 0.0
4.813AsnSer: 4.813 ± 0.0
3.063AsnThr: 3.063 ± 0.0
3.282AsnVal: 3.282 ± 0.0
1.094AsnTrp: 1.094 ± 0.0
5.032AsnTyr: 5.032 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
0.656ProAla: 0.656 ± 0.0
0.875ProCys: 0.875 ± 0.0
3.5ProAsp: 3.5 ± 0.0
2.188ProGlu: 2.188 ± 0.0
0.438ProPhe: 0.438 ± 0.0
1.969ProGly: 1.969 ± 0.0
1.313ProHis: 1.313 ± 0.0
4.375ProIle: 4.375 ± 0.0
1.75ProLys: 1.75 ± 0.0
4.594ProLeu: 4.594 ± 0.0
0.219ProMet: 0.219 ± 0.0
2.625ProAsn: 2.625 ± 0.0
0.875ProPro: 0.875 ± 0.0
0.438ProGln: 0.438 ± 0.0
1.75ProArg: 1.75 ± 0.0
1.969ProSer: 1.969 ± 0.0
2.625ProThr: 2.625 ± 0.0
2.844ProVal: 2.844 ± 0.0
1.094ProTrp: 1.094 ± 0.0
0.875ProTyr: 0.875 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
1.094GlnAla: 1.094 ± 0.0
0.0GlnCys: 0.0 ± 0.0
2.188GlnAsp: 2.188 ± 0.0
0.656GlnGlu: 0.656 ± 0.0
1.531GlnPhe: 1.531 ± 0.0
2.406GlnGly: 2.406 ± 0.0
1.094GlnHis: 1.094 ± 0.0
4.157GlnIle: 4.157 ± 0.0
1.313GlnLys: 1.313 ± 0.0
3.063GlnLeu: 3.063 ± 0.0
0.438GlnMet: 0.438 ± 0.0
1.094GlnAsn: 1.094 ± 0.0
0.438GlnPro: 0.438 ± 0.0
2.406GlnGln: 2.406 ± 0.0
1.531GlnArg: 1.531 ± 0.0
2.625GlnSer: 2.625 ± 0.0
0.656GlnThr: 0.656 ± 0.0
1.094GlnVal: 1.094 ± 0.0
0.219GlnTrp: 0.219 ± 0.0
0.656GlnTyr: 0.656 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.094ArgAla: 1.094 ± 0.0
1.094ArgCys: 1.094 ± 0.0
0.656ArgAsp: 0.656 ± 0.0
2.406ArgGlu: 2.406 ± 0.0
2.188ArgPhe: 2.188 ± 0.0
1.75ArgGly: 1.75 ± 0.0
1.313ArgHis: 1.313 ± 0.0
4.157ArgIle: 4.157 ± 0.0
2.844ArgLys: 2.844 ± 0.0
4.594ArgLeu: 4.594 ± 0.0
0.875ArgMet: 0.875 ± 0.0
2.406ArgAsn: 2.406 ± 0.0
1.75ArgPro: 1.75 ± 0.0
3.063ArgGln: 3.063 ± 0.0
1.75ArgArg: 1.75 ± 0.0
3.063ArgSer: 3.063 ± 0.0
3.282ArgThr: 3.282 ± 0.0
1.75ArgVal: 1.75 ± 0.0
0.438ArgTrp: 0.438 ± 0.0
1.531ArgTyr: 1.531 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
2.406SerAla: 2.406 ± 0.0
2.188SerCys: 2.188 ± 0.0
4.375SerAsp: 4.375 ± 0.0
3.938SerGlu: 3.938 ± 0.0
2.406SerPhe: 2.406 ± 0.0
3.5SerGly: 3.5 ± 0.0
2.188SerHis: 2.188 ± 0.0
5.469SerIle: 5.469 ± 0.0
3.938SerLys: 3.938 ± 0.0
8.97SerLeu: 8.97 ± 0.0
2.188SerMet: 2.188 ± 0.0
5.688SerAsn: 5.688 ± 0.0
3.063SerPro: 3.063 ± 0.0
1.094SerGln: 1.094 ± 0.0
2.844SerArg: 2.844 ± 0.0
5.25SerSer: 5.25 ± 0.0
3.719SerThr: 3.719 ± 0.0
4.157SerVal: 4.157 ± 0.0
1.531SerTrp: 1.531 ± 0.0
1.531SerTyr: 1.531 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
1.531ThrAla: 1.531 ± 0.0
0.875ThrCys: 0.875 ± 0.0
6.126ThrAsp: 6.126 ± 0.0
4.375ThrGlu: 4.375 ± 0.0
1.531ThrPhe: 1.531 ± 0.0
1.75ThrGly: 1.75 ± 0.0
1.75ThrHis: 1.75 ± 0.0
4.813ThrIle: 4.813 ± 0.0
5.907ThrLys: 5.907 ± 0.0
3.5ThrLeu: 3.5 ± 0.0
2.625ThrMet: 2.625 ± 0.0
4.813ThrAsn: 4.813 ± 0.0
2.188ThrPro: 2.188 ± 0.0
1.75ThrGln: 1.75 ± 0.0
2.844ThrArg: 2.844 ± 0.0
3.063ThrSer: 3.063 ± 0.0
4.813ThrThr: 4.813 ± 0.0
5.469ThrVal: 5.469 ± 0.0
0.438ThrTrp: 0.438 ± 0.0
1.094ThrTyr: 1.094 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
1.75ValAla: 1.75 ± 0.0
2.188ValCys: 2.188 ± 0.0
3.719ValAsp: 3.719 ± 0.0
3.282ValGlu: 3.282 ± 0.0
1.313ValPhe: 1.313 ± 0.0
1.969ValGly: 1.969 ± 0.0
3.063ValHis: 3.063 ± 0.0
5.907ValIle: 5.907 ± 0.0
4.813ValLys: 4.813 ± 0.0
3.719ValLeu: 3.719 ± 0.0
1.969ValMet: 1.969 ± 0.0
4.157ValAsn: 4.157 ± 0.0
1.75ValPro: 1.75 ± 0.0
1.531ValGln: 1.531 ± 0.0
2.406ValArg: 2.406 ± 0.0
4.594ValSer: 4.594 ± 0.0
5.25ValThr: 5.25 ± 0.0
2.625ValVal: 2.625 ± 0.0
0.438ValTrp: 0.438 ± 0.0
1.313ValTyr: 1.313 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.438TrpAla: 0.438 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.656TrpAsp: 0.656 ± 0.0
0.438TrpGlu: 0.438 ± 0.0
0.875TrpPhe: 0.875 ± 0.0
0.438TrpGly: 0.438 ± 0.0
0.219TrpHis: 0.219 ± 0.0
1.094TrpIle: 1.094 ± 0.0
0.438TrpLys: 0.438 ± 0.0
1.969TrpLeu: 1.969 ± 0.0
0.656TrpMet: 0.656 ± 0.0
0.438TrpAsn: 0.438 ± 0.0
0.219TrpPro: 0.219 ± 0.0
1.313TrpGln: 1.313 ± 0.0
1.531TrpArg: 1.531 ± 0.0
1.094TrpSer: 1.094 ± 0.0
0.438TrpThr: 0.438 ± 0.0
1.094TrpVal: 1.094 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.875TrpTyr: 0.875 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.75TyrAla: 1.75 ± 0.0
0.875TyrCys: 0.875 ± 0.0
2.406TyrAsp: 2.406 ± 0.0
1.969TyrGlu: 1.969 ± 0.0
1.313TyrPhe: 1.313 ± 0.0
2.625TyrGly: 2.625 ± 0.0
0.875TyrHis: 0.875 ± 0.0
1.75TyrIle: 1.75 ± 0.0
2.844TyrLys: 2.844 ± 0.0
3.719TyrLeu: 3.719 ± 0.0
1.531TyrMet: 1.531 ± 0.0
3.5TyrAsn: 3.5 ± 0.0
1.313TyrPro: 1.313 ± 0.0
0.875TyrGln: 0.875 ± 0.0
0.875TyrArg: 0.875 ± 0.0
2.625TyrSer: 2.625 ± 0.0
1.75TyrThr: 1.75 ± 0.0
2.406TyrVal: 2.406 ± 0.0
0.656TyrTrp: 0.656 ± 0.0
2.188TyrTyr: 2.188 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (4572 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski