Ovis aries papillomavirus 3

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyokappapapillomavirus; Dyokappapapillomavirus 1

Average proteome isoelectric point is 5.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D5FL27|D5FL27_9PAPI Replication protein E1 OS=Ovis aries papillomavirus 3 OX=634772 GN=E1 PE=3 SV=1
MM1 pKa = 8.07RR2 pKa = 11.84GQQPTLPDD10 pKa = 3.28IVLHH14 pKa = 5.93EE15 pKa = 4.31VPEE18 pKa = 4.3PVSLYY23 pKa = 10.5CDD25 pKa = 3.35EE26 pKa = 4.14QLEE29 pKa = 4.4EE30 pKa = 4.63EE31 pKa = 4.56EE32 pKa = 4.58EE33 pKa = 4.24QPALYY38 pKa = 9.49TLYY41 pKa = 9.52TLCGRR46 pKa = 11.84CCQRR50 pKa = 11.84LKK52 pKa = 10.18LTFRR56 pKa = 11.84AFTQTKK62 pKa = 8.05ITLEE66 pKa = 4.0TLLLGDD72 pKa = 5.39LDD74 pKa = 5.14LFCPPCAAA82 pKa = 4.79

Molecular weight: 9.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D8L564|D8L564_9PAPI E4 OS=Ovis aries papillomavirus 3 OX=634772 PE=4 SV=1
MM1 pKa = 7.28AVWVPNGKK9 pKa = 9.27SFYY12 pKa = 10.04LPQSAVTRR20 pKa = 11.84ILSTNEE26 pKa = 3.52YY27 pKa = 9.16VQGTGLVFHH36 pKa = 6.96GSSNRR41 pKa = 11.84LLCVGHH47 pKa = 6.9PFYY50 pKa = 10.17EE51 pKa = 4.37TQRR54 pKa = 11.84PDD56 pKa = 3.18GSVKK60 pKa = 9.91VPKK63 pKa = 10.3VSSSQYY69 pKa = 10.37RR70 pKa = 11.84VFKK73 pKa = 11.09VLLPDD78 pKa = 3.88PNKK81 pKa = 10.18FVFSEE86 pKa = 4.19PNLYY90 pKa = 10.63DD91 pKa = 3.87PEE93 pKa = 4.28SQRR96 pKa = 11.84LVWKK100 pKa = 10.51LRR102 pKa = 11.84GLQVDD107 pKa = 3.96RR108 pKa = 11.84GQPHH112 pKa = 5.92GVWVTGHH119 pKa = 7.18LLMNKK124 pKa = 9.87LDD126 pKa = 3.72DD127 pKa = 3.97TEE129 pKa = 4.15NLGRR133 pKa = 11.84QGSDD137 pKa = 2.75PAGRR141 pKa = 11.84DD142 pKa = 2.73KK143 pKa = 11.18DD144 pKa = 3.74SRR146 pKa = 11.84VNMGLEE152 pKa = 4.18PKK154 pKa = 10.2QMQVLIVGCRR164 pKa = 11.84PPWGEE169 pKa = 3.46HH170 pKa = 3.89WGVAKK175 pKa = 10.5KK176 pKa = 10.25CASDD180 pKa = 3.51NADD183 pKa = 3.67PDD185 pKa = 3.52KK186 pKa = 11.44CPAIEE191 pKa = 4.26LKK193 pKa = 9.63STIIEE198 pKa = 4.84DD199 pKa = 3.88GNMMDD204 pKa = 3.83TGFGNLDD211 pKa = 3.34FRR213 pKa = 11.84SLQEE217 pKa = 4.11NKK219 pKa = 10.11ADD221 pKa = 3.87APIDD225 pKa = 3.45ICQSICKK232 pKa = 9.64YY233 pKa = 10.18PDD235 pKa = 4.81FIRR238 pKa = 11.84MSQEE242 pKa = 3.74TYY244 pKa = 9.06GDD246 pKa = 3.5HH247 pKa = 6.82MFFCAKK253 pKa = 10.17HH254 pKa = 4.23EE255 pKa = 4.23QIYY258 pKa = 9.73LRR260 pKa = 11.84HH261 pKa = 5.69YY262 pKa = 9.56FSKK265 pKa = 10.5AGKK268 pKa = 9.71IGEE271 pKa = 4.39EE272 pKa = 4.35VPKK275 pKa = 9.84TLYY278 pKa = 10.62VPPQPDD284 pKa = 3.68TVNGTVNFWGSPSGSMVSSNNQLFNKK310 pKa = 9.08PYY312 pKa = 9.77WVRR315 pKa = 11.84QAQGHH320 pKa = 5.67NNGVLWNNLAFITVGDD336 pKa = 3.98TTRR339 pKa = 11.84GTNFNISVLDD349 pKa = 4.12NGAQPYY355 pKa = 9.88KK356 pKa = 10.24DD357 pKa = 3.14SSYY360 pKa = 11.78AEE362 pKa = 4.21FLRR365 pKa = 11.84HH366 pKa = 5.81VEE368 pKa = 4.1EE369 pKa = 4.82FDD371 pKa = 3.12IQIIVEE377 pKa = 4.1ACIVDD382 pKa = 4.23LTPEE386 pKa = 3.88IVSFIHH392 pKa = 6.7QMDD395 pKa = 3.82PTILDD400 pKa = 3.32NWNLGIQAAPDD411 pKa = 3.31SSLWEE416 pKa = 4.06TYY418 pKa = 10.12RR419 pKa = 11.84YY420 pKa = 9.62ISSFATKK427 pKa = 10.52CPDD430 pKa = 3.29QVPKK434 pKa = 10.78PEE436 pKa = 4.33APKK439 pKa = 10.74DD440 pKa = 3.7PYY442 pKa = 10.98EE443 pKa = 4.64KK444 pKa = 10.74LSFWTVDD451 pKa = 3.58LNEE454 pKa = 5.17KK455 pKa = 10.28LSQDD459 pKa = 3.43LTHH462 pKa = 6.81FPLGRR467 pKa = 11.84RR468 pKa = 11.84YY469 pKa = 10.06LFQYY473 pKa = 7.15TVRR476 pKa = 11.84PPKK479 pKa = 10.48SAVKK483 pKa = 10.32RR484 pKa = 11.84KK485 pKa = 9.1AANNSGLNSSKK496 pKa = 10.35RR497 pKa = 11.84RR498 pKa = 11.84RR499 pKa = 11.84KK500 pKa = 10.11LNNKK504 pKa = 8.86

Molecular weight: 57.06 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2362

82

607

337.4

37.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.588 ± 0.507

2.456 ± 0.618

5.8 ± 0.567

6.732 ± 0.84

3.683 ± 0.508

6.647 ± 0.938

2.244 ± 0.184

3.895 ± 0.361

5.207 ± 0.745

8.552 ± 0.591

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.651 ± 0.269

4.149 ± 0.617

6.774 ± 0.829

4.742 ± 0.552

5.97 ± 0.59

7.917 ± 0.763

6.181 ± 0.742

6.901 ± 0.664

1.82 ± 0.345

3.091 ± 0.285
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski