Morelia spilota papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyomupapillomavirus; Dyomupapillomavirus 1

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G3DRD2|G3DRD2_9PAPI Replication protein E1 OS=Morelia spilota papillomavirus 1 OX=1081054 GN=E1 PE=3 SV=1
MM1 pKa = 7.5MIGPKK6 pKa = 10.06LDD8 pKa = 3.44VDD10 pKa = 4.26LLCYY14 pKa = 10.43EE15 pKa = 5.39DD16 pKa = 4.24LTSPNPDD23 pKa = 3.05EE24 pKa = 4.71AAIPAPPPSPSHH36 pKa = 6.73PDD38 pKa = 2.99LRR40 pKa = 11.84AYY42 pKa = 9.56TIDD45 pKa = 4.61LGCGYY50 pKa = 8.1CTKK53 pKa = 10.22PLRR56 pKa = 11.84FVTVATAEE64 pKa = 4.49CISLFNRR71 pKa = 11.84LLLLDD76 pKa = 5.39LYY78 pKa = 9.98ILCPEE83 pKa = 4.57CVDD86 pKa = 4.81EE87 pKa = 6.41RR88 pKa = 11.84DD89 pKa = 2.93LDD91 pKa = 3.93YY92 pKa = 11.46YY93 pKa = 11.49YY94 pKa = 11.33GGG96 pKa = 3.81

Molecular weight: 10.67 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G3DRD4|G3DRD4_9PAPI E4 (Fragment) OS=Morelia spilota papillomavirus 1 OX=1081054 PE=4 SV=1
MM1 pKa = 6.55EE2 pKa = 4.8TLRR5 pKa = 11.84KK6 pKa = 9.77RR7 pKa = 11.84LDD9 pKa = 3.48AVQEE13 pKa = 4.0ALLDD17 pKa = 3.66IYY19 pKa = 9.82EE20 pKa = 4.37TAEE23 pKa = 4.04NTLEE27 pKa = 4.07TQIKK31 pKa = 8.02HH32 pKa = 4.81WKK34 pKa = 9.55LVRR37 pKa = 11.84QEE39 pKa = 3.65QTLLYY44 pKa = 9.86FARR47 pKa = 11.84QQGLSHH53 pKa = 7.09IGLQTVPALQISEE66 pKa = 4.46SKK68 pKa = 10.63AKK70 pKa = 9.88EE71 pKa = 3.92AIEE74 pKa = 3.76IQLYY78 pKa = 10.58LEE80 pKa = 4.43SLQNSKK86 pKa = 11.17YY87 pKa = 10.59GDD89 pKa = 4.26EE90 pKa = 4.19PWTMQEE96 pKa = 3.75TSALTFFAVPSRR108 pKa = 11.84TFKK111 pKa = 10.72KK112 pKa = 10.38GPTTVVVQFEE122 pKa = 4.33QHH124 pKa = 4.59TQSYY128 pKa = 6.6TTWTYY133 pKa = 11.42LYY135 pKa = 9.61IQTDD139 pKa = 3.07TDD141 pKa = 2.87MWTKK145 pKa = 10.75YY146 pKa = 9.76VGKK149 pKa = 10.31VSNEE153 pKa = 3.29GAYY156 pKa = 10.24YY157 pKa = 10.46SAGGGLKK164 pKa = 9.17TFYY167 pKa = 10.48ISFSAEE173 pKa = 3.39AKK175 pKa = 10.27KK176 pKa = 11.11YY177 pKa = 8.72NTDD180 pKa = 2.72NWTLVYY186 pKa = 10.23KK187 pKa = 9.34QLPVLTSSITPLQSPTGTTDD207 pKa = 3.03TAEE210 pKa = 4.09TQPAGGRR217 pKa = 11.84PKK219 pKa = 10.08RR220 pKa = 11.84RR221 pKa = 11.84YY222 pKa = 9.09GRR224 pKa = 11.84RR225 pKa = 11.84SEE227 pKa = 4.11SPRR230 pKa = 11.84PRR232 pKa = 11.84RR233 pKa = 11.84RR234 pKa = 11.84RR235 pKa = 11.84EE236 pKa = 3.84DD237 pKa = 3.35QEE239 pKa = 4.05ASSPGGVPVAPEE251 pKa = 3.99DD252 pKa = 3.42VGSRR256 pKa = 11.84NRR258 pKa = 11.84TVEE261 pKa = 3.89AKK263 pKa = 10.21RR264 pKa = 11.84SSRR267 pKa = 11.84LARR270 pKa = 11.84LLDD273 pKa = 3.74EE274 pKa = 5.62ARR276 pKa = 11.84DD277 pKa = 3.79PPIVVLKK284 pKa = 10.59GNPNSLKK291 pKa = 10.05CLRR294 pKa = 11.84YY295 pKa = 9.43RR296 pKa = 11.84LRR298 pKa = 11.84HH299 pKa = 5.09QYY301 pKa = 10.66SKK303 pKa = 10.67EE304 pKa = 3.8FQHH307 pKa = 7.38ISTTFQWVDD316 pKa = 3.36TVDD319 pKa = 3.35SARR322 pKa = 11.84LGRR325 pKa = 11.84GRR327 pKa = 11.84MLVMFTDD334 pKa = 4.59DD335 pKa = 3.39AQRR338 pKa = 11.84MHH340 pKa = 6.86FLKK343 pKa = 10.56HH344 pKa = 5.26VPLPKK349 pKa = 10.26HH350 pKa = 4.32ITAFKK355 pKa = 10.08GQLDD359 pKa = 4.86GII361 pKa = 4.5

Molecular weight: 41.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2240

88

596

320.0

36.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.295 ± 0.447

1.741 ± 0.701

6.161 ± 0.702

6.652 ± 0.723

5.045 ± 0.534

5.313 ± 0.553

1.786 ± 0.313

5.536 ± 0.53

5.134 ± 1.044

9.643 ± 1.205

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.696 ± 0.181

4.063 ± 0.465

5.804 ± 0.831

4.42 ± 0.705

6.027 ± 0.717

7.187 ± 0.629

6.875 ± 0.679

5.982 ± 0.714

1.205 ± 0.351

3.438 ± 0.479
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski