Taro bacilliform virus
Average proteome isoelectric point is 7.61
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q8BEM0|Q8BEM0_9VIRU Uncharacterized protein OS=Taro bacilliform virus OX=178354 PE=4 SV=1
MM1 pKa = 7.27 SLAVRR6 pKa = 11.84 DD7 pKa = 4.05 RR8 pKa = 11.84 GSNPSTSSTVPSQQDD23 pKa = 3.03 QIRR26 pKa = 11.84 DD27 pKa = 3.57 YY28 pKa = 11.71 RR29 pKa = 11.84 NMQRR33 pKa = 11.84 VRR35 pKa = 11.84 HH36 pKa = 4.48 TAEE39 pKa = 3.47 RR40 pKa = 11.84 AARR43 pKa = 11.84 RR44 pKa = 11.84 IFPGRR49 pKa = 11.84 FNRR52 pKa = 11.84 TLEE55 pKa = 4.11 SQINPEE61 pKa = 3.78 AEE63 pKa = 3.55 IRR65 pKa = 11.84 LSQQRR70 pKa = 11.84 RR71 pKa = 11.84 AAMVPAEE78 pKa = 4.14 VLYY81 pKa = 9.04 NTSPSTRR88 pKa = 11.84 NQKK91 pKa = 9.63 VYY93 pKa = 9.0 QHH95 pKa = 6.03 YY96 pKa = 9.69 SEE98 pKa = 5.06 EE99 pKa = 4.77 RR100 pKa = 11.84 ILCTGQNQQLNLPFINEE117 pKa = 3.64 SSYY120 pKa = 10.87 RR121 pKa = 11.84 ALRR124 pKa = 11.84 EE125 pKa = 3.79 SGQQHH130 pKa = 5.75 LHH132 pKa = 6.44 IGLIMIRR139 pKa = 11.84 VHH141 pKa = 6.06 PLHH144 pKa = 6.73 RR145 pKa = 11.84 RR146 pKa = 11.84 NAGTTALIVPRR157 pKa = 11.84 DD158 pKa = 3.59 IRR160 pKa = 11.84 WNDD163 pKa = 3.08 DD164 pKa = 2.78 RR165 pKa = 11.84 SIIGTMEE172 pKa = 4.19 IDD174 pKa = 4.17 LSAGSQIVYY183 pKa = 9.83 IAPNIMLSVEE193 pKa = 3.79 DD194 pKa = 4.58 FYY196 pKa = 11.9 RR197 pKa = 11.84 NIQLAIQTQGYY208 pKa = 7.61 EE209 pKa = 3.91 NWNSAEE215 pKa = 4.13 SNLLISRR222 pKa = 11.84 ALIGRR227 pKa = 11.84 LTNDD231 pKa = 2.77 SFTGFQYY238 pKa = 10.87 NISNVAEE245 pKa = 4.2 YY246 pKa = 10.38 LHH248 pKa = 6.04 SHH250 pKa = 6.19 GVQAIEE256 pKa = 4.46 GQAHH260 pKa = 6.77 PRR262 pKa = 11.84 TLGNRR267 pKa = 11.84 WILQAPAPPRR277 pKa = 11.84 SLVPQNVEE285 pKa = 3.86 TTTLLDD291 pKa = 3.84 GNVSIRR297 pKa = 11.84 FSNYY301 pKa = 8.57 HH302 pKa = 4.9 QAPVNDD308 pKa = 4.31 TQDD311 pKa = 3.16 NSHH314 pKa = 7.43 PDD316 pKa = 3.05 IQEE319 pKa = 4.53 DD320 pKa = 3.95 EE321 pKa = 4.21 NQFIGFLSDD330 pKa = 3.51 LGEE333 pKa = 4.34 EE334 pKa = 4.64 YY335 pKa = 10.61 EE336 pKa = 4.52 LEE338 pKa = 4.37 YY339 pKa = 10.47 PSFTPVHH346 pKa = 6.23 ADD348 pKa = 3.09 EE349 pKa = 5.8 FIFIIINGEE358 pKa = 4.19 EE359 pKa = 3.98 IPDD362 pKa = 3.9 DD363 pKa = 4.1 FVSSFCSNFSPPPIPEE379 pKa = 4.44 PEE381 pKa = 3.83 PTAIEE386 pKa = 3.99 EE387 pKa = 4.25 TAFTLEE393 pKa = 4.09 EE394 pKa = 4.0 QFNDD398 pKa = 3.26 LDD400 pKa = 4.16 YY401 pKa = 8.64 PTLISMEE408 pKa = 4.09 KK409 pKa = 10.15 QLVQSSVTSAYY420 pKa = 10.51 NPPTEE425 pKa = 4.06 PLMGQVVYY433 pKa = 9.77 PPASAPRR440 pKa = 11.84 PQAEE444 pKa = 4.06 TSSTSEE450 pKa = 3.58 RR451 pKa = 11.84 FKK453 pKa = 11.26 NFRR456 pKa = 11.84 AKK458 pKa = 10.21 PYY460 pKa = 7.56 STPTIFLPPAYY471 pKa = 8.87 NQQGAILVLPDD482 pKa = 5.68 DD483 pKa = 3.99 IGLYY487 pKa = 10.52 EE488 pKa = 4.08 DD489 pKa = 4.68 TISRR493 pKa = 11.84 WEE495 pKa = 4.28 SITLNMMNEE504 pKa = 4.31 KK505 pKa = 9.61 VWPSNEE511 pKa = 3.52 AKK513 pKa = 10.36 AKK515 pKa = 10.38 YY516 pKa = 9.1 MEE518 pKa = 4.39 NLLGEE523 pKa = 4.47 MEE525 pKa = 4.42 KK526 pKa = 9.45 KK527 pKa = 8.36 TWIQWRR533 pKa = 11.84 TTYY536 pKa = 10.34 VSEE539 pKa = 4.01 YY540 pKa = 10.53 DD541 pKa = 3.83 ALVQQSDD548 pKa = 3.55 EE549 pKa = 4.37 TQNLLSQVRR558 pKa = 11.84 RR559 pKa = 11.84 IFLLQDD565 pKa = 4.05 PYY567 pKa = 11.21 QGSTAEE573 pKa = 4.24 QDD575 pKa = 3.16 QAYY578 pKa = 10.45 NDD580 pKa = 4.29 LEE582 pKa = 5.19 RR583 pKa = 11.84 ISCDD587 pKa = 3.3 NIKK590 pKa = 10.87 DD591 pKa = 4.5 LIPYY595 pKa = 8.75 LIQFRR600 pKa = 11.84 NLAAKK605 pKa = 10.08 SGRR608 pKa = 11.84 LFLGPEE614 pKa = 3.86 LSEE617 pKa = 3.86 KK618 pKa = 10.37 LFRR621 pKa = 11.84 KK622 pKa = 8.22 MPPLIGKK629 pKa = 9.0 EE630 pKa = 3.6 IEE632 pKa = 3.97 TAFIAKK638 pKa = 9.64 HH639 pKa = 5.19 GNANITVMPRR649 pKa = 11.84 IHH651 pKa = 6.79 FAYY654 pKa = 9.98 HH655 pKa = 5.97 YY656 pKa = 10.56 LAEE659 pKa = 4.4 LCKK662 pKa = 10.36 KK663 pKa = 10.38 AALQRR668 pKa = 11.84 SLKK671 pKa = 10.58 DD672 pKa = 3.58 LSFCNQIPLPGIYY685 pKa = 9.77 TKK687 pKa = 10.92 GNKK690 pKa = 9.49 KK691 pKa = 10.23 FGLRR695 pKa = 11.84 KK696 pKa = 9.61 ARR698 pKa = 11.84 TYY700 pKa = 10.34 KK701 pKa = 10.6 GKK703 pKa = 9.02 PHH705 pKa = 6.43 PTHH708 pKa = 6.21 VRR710 pKa = 11.84 VFKK713 pKa = 10.22 KK714 pKa = 10.61 AKK716 pKa = 7.38 YY717 pKa = 9.96 QRR719 pKa = 11.84 TKK721 pKa = 10.16 KK722 pKa = 9.97 CKK724 pKa = 10.11 CFICGEE730 pKa = 4.27 PGHH733 pKa = 6.35 FARR736 pKa = 11.84 EE737 pKa = 4.21 CTKK740 pKa = 10.31 QRR742 pKa = 11.84 GNIVRR747 pKa = 11.84 ATVHH751 pKa = 5.92 QEE753 pKa = 3.46 LAIPDD758 pKa = 3.86 NFDD761 pKa = 3.55 VVSVDD766 pKa = 3.41 ADD768 pKa = 3.56 EE769 pKa = 5.08 SDD771 pKa = 3.21 SSGIYY776 pKa = 9.96 SYY778 pKa = 11.51 SEE780 pKa = 3.81 NEE782 pKa = 3.96 APLQEE787 pKa = 4.5 VNSFIHH793 pKa = 7.08 DD794 pKa = 3.52 EE795 pKa = 4.43 NIFFLSDD802 pKa = 3.14 ADD804 pKa = 3.95 EE805 pKa = 4.9 FEE807 pKa = 5.27 SPQQHH812 pKa = 5.43 LHH814 pKa = 5.15 EE815 pKa = 4.71 TVNMLQSRR823 pKa = 11.84 SAYY826 pKa = 9.58 LPQVAVGEE834 pKa = 4.34 EE835 pKa = 4.17 KK836 pKa = 10.99 LNCSHH841 pKa = 7.26 IWLQDD846 pKa = 2.89 VDD848 pKa = 3.98 IPSDD852 pKa = 2.97 KK853 pKa = 10.65 HH854 pKa = 5.95 KK855 pKa = 11.0 CHH857 pKa = 6.25 TCRR860 pKa = 11.84 RR861 pKa = 11.84 DD862 pKa = 3.46 TQKK865 pKa = 10.68 HH866 pKa = 4.58 YY867 pKa = 10.84 RR868 pKa = 11.84 LEE870 pKa = 4.15 CQKK873 pKa = 10.95 CKK875 pKa = 10.51 FLVCSLCTIPYY886 pKa = 10.1 LGITMQFRR894 pKa = 11.84 QKK896 pKa = 10.55 QKK898 pKa = 10.64 SQPEE902 pKa = 4.09 NPNLVRR908 pKa = 11.84 EE909 pKa = 4.42 LLEE912 pKa = 3.73 HH913 pKa = 7.59 AIFLEE918 pKa = 4.73 EE919 pKa = 3.84 KK920 pKa = 10.48 CKK922 pKa = 10.6 NQEE925 pKa = 4.33 LLSEE929 pKa = 4.27 TQIEE933 pKa = 4.48 RR934 pKa = 11.84 IVSSEE939 pKa = 4.03 KK940 pKa = 9.53 QVKK943 pKa = 9.74 FYY945 pKa = 11.29 GILPTKK951 pKa = 10.17 KK952 pKa = 8.84 SNKK955 pKa = 8.57 SAGYY959 pKa = 9.84 DD960 pKa = 3.37 LQSNIDD966 pKa = 3.5 IEE968 pKa = 4.35 IPPGKK973 pKa = 8.87 CTVISTGTFLQMPDD987 pKa = 2.93 NMYY990 pKa = 10.73 GRR992 pKa = 11.84 LVEE995 pKa = 4.21 RR996 pKa = 11.84 TSLAIQGITVQGGVIDD1012 pKa = 4.27 PDD1014 pKa = 3.65 FTGEE1018 pKa = 3.85 IQIVLFNHH1026 pKa = 5.24 NTAPYY1031 pKa = 8.53 PVKK1034 pKa = 9.68 KK1035 pKa = 8.98 TYY1037 pKa = 10.69 RR1038 pKa = 11.84 LAQIIFEE1045 pKa = 4.32 KK1046 pKa = 10.4 FYY1048 pKa = 10.85 TPIFIQEE1055 pKa = 4.58 PFTSTQQGSSNFGSTAKK1072 pKa = 10.28 PLQITEE1078 pKa = 4.41 NIEE1081 pKa = 4.03 VMSEE1085 pKa = 3.89 TVANQVAKK1093 pKa = 10.77 SSVLPRR1099 pKa = 11.84 LYY1101 pKa = 10.49 SIQAHH1106 pKa = 5.39 IHH1108 pKa = 5.32 IAPDD1112 pKa = 3.31 IVISTTAIIDD1122 pKa = 3.42 TGATVCCISEE1132 pKa = 4.42 KK1133 pKa = 10.29 IVPEE1137 pKa = 3.9 AAKK1140 pKa = 10.12 EE1141 pKa = 3.85 QLNYY1145 pKa = 10.05 KK1146 pKa = 9.99 VNISGISSQQQIQHH1160 pKa = 5.78 RR1161 pKa = 11.84 LKK1163 pKa = 10.82 RR1164 pKa = 11.84 GTLEE1168 pKa = 3.82 IASNKK1173 pKa = 8.91 YY1174 pKa = 10.26 ALPLCYY1180 pKa = 9.46 IIEE1183 pKa = 4.68 LNDD1186 pKa = 3.54 KK1187 pKa = 10.91 DD1188 pKa = 4.57 DD1189 pKa = 4.17 FSMILGCNFFKK1200 pKa = 11.03 HH1201 pKa = 5.93 MGGGMRR1207 pKa = 11.84 FEE1209 pKa = 4.95 GPHH1212 pKa = 3.74 VTFYY1216 pKa = 11.26 KK1217 pKa = 10.96 GITTLSTSYY1226 pKa = 11.37 ANTGIDD1232 pKa = 3.72 TEE1234 pKa = 4.65 HH1235 pKa = 6.36 EE1236 pKa = 4.48 QITSTTSQSFKK1247 pKa = 10.98 EE1248 pKa = 4.18 RR1249 pKa = 11.84 FSPLMNEE1256 pKa = 4.8 LKK1258 pKa = 10.19 AAGYY1262 pKa = 9.98 IGEE1265 pKa = 5.38 DD1266 pKa = 3.94 PLKK1269 pKa = 10.08 HH1270 pKa = 5.29 WSKK1273 pKa = 11.59 NKK1275 pKa = 8.05 VTCKK1279 pKa = 10.33 LDD1281 pKa = 3.7 LKK1283 pKa = 9.67 NTEE1286 pKa = 3.77 ITIQDD1291 pKa = 3.35 KK1292 pKa = 9.67 PLRR1295 pKa = 11.84 HH1296 pKa = 5.81 ITPALEE1302 pKa = 3.88 QSYY1305 pKa = 10.04 GRR1307 pKa = 11.84 HH1308 pKa = 4.36 VNALLMLKK1316 pKa = 10.0 VIQPSKK1322 pKa = 9.79 SRR1324 pKa = 11.84 HH1325 pKa = 3.58 RR1326 pKa = 11.84 TMAFLVNSGTTVTADD1341 pKa = 2.98 GKK1343 pKa = 9.77 EE1344 pKa = 4.07 IKK1346 pKa = 10.4 GKK1348 pKa = 10.05 EE1349 pKa = 3.69 RR1350 pKa = 11.84 MVFNYY1355 pKa = 9.86 KK1356 pKa = 10.28 ALNDD1360 pKa = 3.64 NTYY1363 pKa = 10.56 KK1364 pKa = 10.74 DD1365 pKa = 3.99 QYY1367 pKa = 10.78 SLPNIQLILKK1377 pKa = 9.72 KK1378 pKa = 10.53 VINSTIYY1385 pKa = 10.89 SKK1387 pKa = 11.26 FDD1389 pKa = 3.67 LKK1391 pKa = 11.29 SGFHH1395 pKa = 5.25 QVAMDD1400 pKa = 4.31 PDD1402 pKa = 4.23 SVEE1405 pKa = 3.52 WTAFLVPQGLYY1416 pKa = 9.53 EE1417 pKa = 4.05 WLAMPFGLKK1426 pKa = 9.52 NAPAVFQRR1434 pKa = 11.84 KK1435 pKa = 7.33 MDD1437 pKa = 3.82 AVFKK1441 pKa = 10.54 GCEE1444 pKa = 3.92 KK1445 pKa = 10.56 FLAVYY1450 pKa = 10.18 IDD1452 pKa = 5.15 DD1453 pKa = 4.06 ILVFSNNEE1461 pKa = 3.54 EE1462 pKa = 3.9 DD1463 pKa = 3.69 HH1464 pKa = 6.87 AKK1466 pKa = 10.47 HH1467 pKa = 5.73 LVIMLQRR1474 pKa = 11.84 CKK1476 pKa = 10.53 EE1477 pKa = 4.08 HH1478 pKa = 7.0 GLVLSPTKK1486 pKa = 10.35 MNIAVRR1492 pKa = 11.84 EE1493 pKa = 4.16 VNFLGATIGSRR1504 pKa = 11.84 KK1505 pKa = 9.72 VKK1507 pKa = 10.16 LQEE1510 pKa = 4.19 NIIKK1514 pKa = 10.44 KK1515 pKa = 10.07 ILDD1518 pKa = 3.54 FDD1520 pKa = 4.25 TEE1522 pKa = 4.25 KK1523 pKa = 11.05 LQSKK1527 pKa = 10.13 KK1528 pKa = 10.43 GLRR1531 pKa = 11.84 SFLGILNYY1539 pKa = 10.27 ARR1541 pKa = 11.84 NHH1543 pKa = 5.88 IPNLGKK1549 pKa = 10.1 IAGPLYY1555 pKa = 10.6 SKK1557 pKa = 9.8 TSIYY1561 pKa = 11.04 GDD1563 pKa = 3.06 IRR1565 pKa = 11.84 FSASDD1570 pKa = 2.99 WKK1572 pKa = 10.92 LINEE1576 pKa = 4.33 IKK1578 pKa = 10.67 AIVEE1582 pKa = 4.05 KK1583 pKa = 10.63 LPPLDD1588 pKa = 4.04 YY1589 pKa = 10.68 PPEE1592 pKa = 3.66 QAYY1595 pKa = 9.77 IIIEE1599 pKa = 3.96 SDD1601 pKa = 2.94 GCMEE1605 pKa = 4.24 GWGAICKK1612 pKa = 8.66 WKK1614 pKa = 10.15 LAEE1617 pKa = 4.19 YY1618 pKa = 9.98 DD1619 pKa = 4.0 PKK1621 pKa = 11.09 SSEE1624 pKa = 4.12 QICAYY1629 pKa = 10.44 ASGKK1633 pKa = 9.95 FSPIKK1638 pKa = 9.74 STIDD1642 pKa = 3.44 AEE1644 pKa = 4.05 ITAAMEE1650 pKa = 3.87 GLEE1653 pKa = 3.95 AFKK1656 pKa = 10.5 IHH1658 pKa = 6.52 YY1659 pKa = 9.74 LDD1661 pKa = 3.51 KK1662 pKa = 11.23 QKK1664 pKa = 9.27 ITLRR1668 pKa = 11.84 TDD1670 pKa = 3.24 CQAIISFCNKK1680 pKa = 8.85 TSVNKK1685 pKa = 9.49 PSRR1688 pKa = 11.84 VRR1690 pKa = 11.84 WLKK1693 pKa = 10.8 FIDD1696 pKa = 4.28 YY1697 pKa = 8.26 ITNTGIDD1704 pKa = 3.42 VKK1706 pKa = 10.96 FEE1708 pKa = 4.95 HH1709 pKa = 7.3 IDD1711 pKa = 3.18 AKK1713 pKa = 11.38 NNVLADD1719 pKa = 3.67 TLSRR1723 pKa = 11.84 LVNTLQDD1730 pKa = 4.41 LPWLDD1735 pKa = 4.91 EE1736 pKa = 3.88 PHH1738 pKa = 6.48 QDD1740 pKa = 3.26 QTVSLMQEE1748 pKa = 3.84 IEE1750 pKa = 4.17 DD1751 pKa = 3.99 APLEE1755 pKa = 4.16 IKK1757 pKa = 10.13 QRR1759 pKa = 11.84 SLTCLQRR1766 pKa = 11.84 LICRR1770 pKa = 11.84 SFMEE1774 pKa = 5.18 DD1775 pKa = 2.93 STEE1778 pKa = 3.92 EE1779 pKa = 4.4 AIHH1782 pKa = 6.32 FLEE1785 pKa = 5.15 DD1786 pKa = 4.29 DD1787 pKa = 4.35 KK1788 pKa = 11.65 IEE1790 pKa = 4.23 PTAEE1794 pKa = 3.73 SSTPITLDD1802 pKa = 2.88 EE1803 pKa = 4.54 FSRR1806 pKa = 11.84 KK1807 pKa = 8.97 RR1808 pKa = 11.84 FQEE1811 pKa = 3.89 HH1812 pKa = 6.02 TDD1814 pKa = 3.56 LLEE1817 pKa = 4.21 EE1818 pKa = 4.21 FQLTLLQINLLEE1830 pKa = 4.62 ASLHH1834 pKa = 5.12 EE1835 pKa = 4.6 RR1836 pKa = 11.84 LMKK1839 pKa = 9.57 CQSYY1843 pKa = 8.01 ATRR1846 pKa = 11.84 DD1847 pKa = 3.87 NFWGDD1852 pKa = 3.34 WLPEE1856 pKa = 3.75 ARR1858 pKa = 11.84 RR1859 pKa = 11.84 DD1860 pKa = 3.69 LLQIQLAKK1868 pKa = 10.53 EE1869 pKa = 3.95 IIEE1872 pKa = 4.09 KK1873 pKa = 10.21 VRR1875 pKa = 11.84 EE1876 pKa = 4.03 KK1877 pKa = 10.79 LHH1879 pKa = 6.86 SII1881 pKa = 4.01
Molecular weight: 214.34 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.908
IPC2_protein 5.893
IPC_protein 5.957
Toseland 6.313
ProMoST 6.326
Dawson 6.237
Bjellqvist 6.249
Wikipedia 6.249
Rodwell 6.224
Grimsley 6.453
Solomon 6.237
Lehninger 6.237
Nozaki 6.517
DTASelect 6.693
Thurlkill 6.707
EMBOSS 6.678
Sillero 6.62
Patrickios 4.177
IPC_peptide 6.249
IPC2_peptide 6.561
IPC2.peptide.svr19 6.552
Protein with the highest isoelectric point:
>tr|Q8BEM1|Q8BEM1_9VIRU Uncharacterized protein OS=Taro bacilliform virus OX=178354 PE=4 SV=1
MM1 pKa = 7.41 SVPNSTYY8 pKa = 9.64 PGYY11 pKa = 10.26 IKK13 pKa = 10.53 SLEE16 pKa = 4.09 EE17 pKa = 3.93 TKK19 pKa = 10.97 VLGDD23 pKa = 3.45 PSVGFSEE30 pKa = 4.96 IPTTAIGTATGFSTLYY46 pKa = 9.83 KK47 pKa = 10.32 QNNTIINLLISLHH60 pKa = 6.38 KK61 pKa = 10.81 KK62 pKa = 9.8 VDD64 pKa = 3.8 SLSKK68 pKa = 10.07 KK69 pKa = 8.7 TDD71 pKa = 3.03 VDD73 pKa = 3.78 EE74 pKa = 5.31 LATEE78 pKa = 4.59 LSKK81 pKa = 10.64 LTIKK85 pKa = 9.17 DD86 pKa = 3.65 TPKK89 pKa = 10.79 VKK91 pKa = 10.58 AKK93 pKa = 9.77 TPLYY97 pKa = 9.53 VFKK100 pKa = 10.68 SPRR103 pKa = 11.84 LILEE107 pKa = 3.81 EE108 pKa = 3.85 EE109 pKa = 4.57 RR110 pKa = 11.84 YY111 pKa = 10.42 KK112 pKa = 10.68 IGLPPTTTDD121 pKa = 2.95 WTWPVGHH128 pKa = 7.34 PFAPPPKK135 pKa = 8.34 TSTKK139 pKa = 10.76 ASTSSS144 pKa = 2.97
Molecular weight: 15.78 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 8.701
IPC2_protein 8.595
IPC_protein 8.536
Toseland 9.385
ProMoST 9.033
Dawson 9.604
Bjellqvist 9.224
Wikipedia 9.75
Rodwell 10.043
Grimsley 9.663
Solomon 9.677
Lehninger 9.648
Nozaki 9.326
DTASelect 9.238
Thurlkill 9.443
EMBOSS 9.794
Sillero 9.502
Patrickios 5.347
IPC_peptide 9.677
IPC2_peptide 7.629
IPC2.peptide.svr19 7.787
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
2171
144
1881
723.7
82.26
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.08 ± 0.794
1.52 ± 0.753
4.79 ± 0.526
7.324 ± 0.647
4.053 ± 0.643
4.146 ± 1.224
2.672 ± 0.423
7.877 ± 1.025
6.955 ± 2.208
9.304 ± 1.647
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
1.75 ± 0.526
4.698 ± 1.356
5.389 ± 1.147
5.62 ± 1.164
4.514 ± 1.194
7.738 ± 1.288
6.541 ± 2.001
4.698 ± 0.404
0.967 ± 0.106
3.363 ± 0.398
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here